RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 GRAPLQ8TC17 118 aaPredicted RBP28.26■■■□□ 2.11
PCOLCE-210ENST00000496269 ZNF277Q9NRM2 450 aaPredicted RBP28.26■■■□□ 2.11
PCOLCE-210ENST00000496269 DNAAF4Q8WXU2 420 aa28.25■■■□□ 2.11
PCOLCE-210ENST00000496269 JARID2Q92833 1246 aaPredicted RBP28.25■■■□□ 2.11
PCOLCE-210ENST00000496269 GLTPD2A6NH11 291 aa28.24■■■□□ 2.11
PCOLCE-210ENST00000496269 BBOX1O75936 387 aa28.24■■■□□ 2.11
PCOLCE-210ENST00000496269 DDX46Q7L014 1031 aaKnown RBP28.24■■■□□ 2.11
PCOLCE-210ENST00000496269 KDM2BQ8NHM5 1336 aa28.23■■■□□ 2.11
PCOLCE-210ENST00000496269 NEXNQ0ZGT2 675 aa28.23■■■□□ 2.11
PCOLCE-210ENST00000496269 GRIPAP1Q4V328 841 aa28.22■■■□□ 2.11
PCOLCE-210ENST00000496269 SP8Q8IXZ3 490 aa28.22■■■□□ 2.11
PCOLCE-210ENST00000496269 CELF1Q92879 486 aaKnown RBP28.22■■■□□ 2.11
PCOLCE-210ENST00000496269 H7C1W4 665 aa28.21■■■□□ 2.11
PCOLCE-210ENST00000496269 IARSP41252 1262 aaKnown RBP28.21■■■□□ 2.11
PCOLCE-210ENST00000496269 CASP7P55210 303 aa28.21■■■□□ 2.11
PCOLCE-210ENST00000496269 F6X3S4 739 aa28.2■■■□□ 2.1
PCOLCE-210ENST00000496269 PDE8AO60658 829 aa28.2■■■□□ 2.1
PCOLCE-210ENST00000496269 GCKRQ14397 625 aa28.2■■■□□ 2.1
PCOLCE-210ENST00000496269 LINS1Q8NG48 757 aa28.2■■■□□ 2.1
PCOLCE-210ENST00000496269 RTFDC1Q9BY42 306 aaPredicted RBP28.2■■■□□ 2.1
PCOLCE-210ENST00000496269 MRPL50Q8N5N7 158 aaKnown RBP28.19■■■□□ 2.1
PCOLCE-210ENST00000496269 SPEF2Q9C093 1822 aa28.18■■■□□ 2.1
PCOLCE-210ENST00000496269 POTECB2RU33 542 aa28.18■■■□□ 2.1
PCOLCE-210ENST00000496269 BEND3Q5T5X7 828 aa28.18■■■□□ 2.1
PCOLCE-210ENST00000496269 TMC4Q7Z404 712 aa28.17■■■□□ 2.1
PCOLCE-210ENST00000496269 RRAGCQ9HB90 399 aa28.17■■■□□ 2.1
PCOLCE-210ENST00000496269 SEC31BQ9NQW1 1179 aa28.17■■■□□ 2.1
PCOLCE-210ENST00000496269 ZNF541Q9H0D2 1346 aa28.17■■■□□ 2.1
PCOLCE-210ENST00000496269 HSP90B1P14625 803 aaKnown RBP28.16■■■□□ 2.1
PCOLCE-210ENST00000496269 SSH1Q8WYL5 1049 aa28.16■■■□□ 2.1
PCOLCE-210ENST00000496269 FZD9O00144 591 aa28.15■■■□□ 2.1
PCOLCE-210ENST00000496269 CTSWP56202 376 aa28.15■■■□□ 2.1
PCOLCE-210ENST00000496269 UBE3BQ7Z3V4 1068 aa28.15■■■□□ 2.1
PCOLCE-210ENST00000496269 PLA2G12BQ9BX93 195 aa28.15■■■□□ 2.1
PCOLCE-210ENST00000496269 RTL9Q8NET4 1388 aa28.14■■■□□ 2.1
PCOLCE-210ENST00000496269 SCN4AP35499 1836 aa28.14■■■□□ 2.1
PCOLCE-210ENST00000496269 DDNO94850 711 aaPredicted RBP28.13■■■□□ 2.09
PCOLCE-210ENST00000496269 CCDC152Q4G0S7 254 aa28.13■■■□□ 2.09
PCOLCE-210ENST00000496269 TTLL11Q8NHH1 800 aa28.13■■■□□ 2.09
PCOLCE-210ENST00000496269 RPS8P62241 208 aaKnown RBP28.12■■■□□ 2.09
PCOLCE-210ENST00000496269 DPY19L2Q6NUT2 758 aa28.12■■■□□ 2.09
PCOLCE-210ENST00000496269 MPNDQ8N594 471 aa28.12■■■□□ 2.09
PCOLCE-210ENST00000496269 TOMM70O94826 608 aa28.11■■■□□ 2.09
PCOLCE-210ENST00000496269 DPP8Q6V1X1 898 aaPredicted RBP28.11■■■□□ 2.09
PCOLCE-210ENST00000496269 CCDC85AQ96PX6 553 aaPredicted RBP28.11■■■□□ 2.09
PCOLCE-210ENST00000496269 VPS33BQ9H267 617 aa28.11■■■□□ 2.09
PCOLCE-210ENST00000496269 ALDH1L2Q3SY69 923 aa28.1■■■□□ 2.09
PCOLCE-210ENST00000496269 L3MBTL3Q96JM7 780 aaPredicted RBP28.1■■■□□ 2.09
PCOLCE-210ENST00000496269 AOC3Q16853 763 aa28.09■■■□□ 2.09
PCOLCE-210ENST00000496269 CT47B1P0C2W7 299 aaPredicted RBP28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 VEGFAP15692 232 aaPredicted RBP28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 GPSM2P81274 684 aa28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 LARGE2Q8N3Y3 721 aa28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 SUPT20HQ8NEM7 779 aa28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 RBM46Q8TBY0 533 aaKnown RBP28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 BCL2L13Q9BXK5 485 aa28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 TMX4Q9H1E5 349 aaPredicted RBP28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 GREM2Q9H772 168 aa28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 A0A1B0GUL6 1792 aa28.08■■■□□ 2.09
PCOLCE-210ENST00000496269 ADAMTSL1Q8N6G6 1762 aa28.07■■■□□ 2.08
PCOLCE-210ENST00000496269 PPIP5K2O43314 1243 aa28.07■■■□□ 2.08
PCOLCE-210ENST00000496269 CSF1RP07333 972 aa28.07■■■□□ 2.08
PCOLCE-210ENST00000496269 KIAA2012Q0VF49 1180 aa28.07■■■□□ 2.08
PCOLCE-210ENST00000496269 PTPRCP08575 1304 aa28.07■■■□□ 2.08
PCOLCE-210ENST00000496269 ALDH1L1O75891 902 aa28.06■■■□□ 2.08
PCOLCE-210ENST00000496269 JDP2Q8WYK2 163 aa28.06■■■□□ 2.08
PCOLCE-210ENST00000496269 PODXL2Q9NZ53 605 aa28.05■■■□□ 2.08
PCOLCE-210ENST00000496269 POLLQ9UGP5 575 aa28.05■■■□□ 2.08
PCOLCE-210ENST00000496269 BRPF1P55201 1214 aaPredicted RBP28.04■■■□□ 2.08
PCOLCE-210ENST00000496269 FOXO4P98177 505 aa28.04■■■□□ 2.08
PCOLCE-210ENST00000496269 GRM8O00222 908 aa28.03■■■□□ 2.08
PCOLCE-210ENST00000496269 SRCIN1Q9C0H9 1055 aa28.03■■■□□ 2.08
PCOLCE-210ENST00000496269 NSFL1CQ9UNZ2 370 aaKnown RBP28.03■■■□□ 2.08
PCOLCE-210ENST00000496269 UTYO14607 1347 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 HNRNPUQ00839 825 aaKnown RBP eCLIP28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 FAM161AQ3B820 660 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 EPHA10Q5JZY3 1008 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 SLC4A10Q6U841 1118 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 ANKRD18AQ8IVF6 992 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 NIM1KQ8IY84 436 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 GPC2Q8N158 579 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 TBC1D16Q8TBP0 767 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 SMC4Q9NTJ3 1288 aa28.02■■■□□ 2.08
PCOLCE-210ENST00000496269 CDC5LQ99459 802 aaKnown RBP28.01■■■□□ 2.07
PCOLCE-210ENST00000496269 SCN9AQ15858 1988 aa28■■■□□ 2.07
PCOLCE-210ENST00000496269 PSME4Q14997 1843 aa28■■■□□ 2.07
PCOLCE-210ENST00000496269 C16orf71Q8IYS4 520 aaPredicted RBP28■■■□□ 2.07
PCOLCE-210ENST00000496269 YDJCA8MPS7 323 aa27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 HSPA6P17066 643 aa27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 ITGA6P23229 1130 aa27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 RARSP54136 660 aaKnown RBP27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 EIF6P56537 245 aaKnown RBP27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 KAZALD1Q96I82 304 aa27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 GPR101Q96P66 508 aaPredicted RBP27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 BSDC1Q9NW68 430 aaPredicted RBP27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 ZNRF3Q9ULT6 936 aa27.99■■■□□ 2.07
PCOLCE-210ENST00000496269 ZNF646O15015 1829 aaPredicted RBP27.98■■■□□ 2.07
PCOLCE-210ENST00000496269 FSTL1Q12841 308 aa27.98■■■□□ 2.07
PCOLCE-210ENST00000496269 TAF1DQ9H5J8 278 aaPredicted RBP27.98■■■□□ 2.07
PCOLCE-210ENST00000496269 POTEIP0CG38 1075 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms