RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SNX21Q969T3 373 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 EVI5LQ96CN4 794 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 GPR108Q9NPR9 543 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
SMARCC1-208ENST00000492896 RIC1Q4ADV7 1423 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 IRS4O14654 1257 aaPredicted RBP11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 EPB41L2O43491 1005 aaKnown RBP11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 PDE8AO60658 829 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 MCCP23508 829 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 RABEP1Q15276 862 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 AK7Q96M32 723 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 KIF2CQ99661 725 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 DBNLQ9UJU6 430 aaKnown RBP11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 RFX7Q2KHR2 1363 aa11.12□□□□□ -0.63
SMARCC1-208ENST00000492896 SH3TC1Q8TE82 1336 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 HIP1O00291 1037 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 RGL2O15211 777 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 PTF1AQ7RTS3 328 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 RUFY2Q8WXA3 655 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 ZNF594Q96JF6 807 aaPredicted RBP11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 UTP14AQ9BVJ6 771 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 CCNL1Q9UK58 526 aaPredicted RBP11.11□□□□□ -0.63
SMARCC1-208ENST00000492896 ANKRD18BA2A2Z9 1011 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 SGSM2O43147 1006 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 ATP5JP18859 108 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 LRRC24Q50LG9 513 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 SUSD4Q5VX71 490 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 BOLA2Q9H3K6 86 aa11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 QTRT2Q9H974 415 aaKnown RBP11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 NIP7Q9Y221 180 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMARCC1-208ENST00000492896 RAD50Q92878 1312 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 NTSR2O95665 410 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 ITGA6P23229 1130 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 PUS3Q9BZE2 481 aaKnown RBP11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 GREM2Q9H772 168 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
SMARCC1-208ENST00000492896 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 ABCC12Q96J65 1359 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 RPS6KA4O75676 772 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 KCNQ4P56696 695 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 ANAPC15P60006 121 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 CWC27Q6UX04 472 aaKnown RBP11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 KIAA1211Q6ZU35 1233 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 HAUS7Q99871 368 aa11.08□□□□□ -0.64
SMARCC1-208ENST00000492896 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 FAM177BA6PVY3 158 aa11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 K7ELQ4 463 aaPredicted RBP11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 GNPATO15228 680 aa11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 METTL24Q5JXM2 366 aa11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 IL25Q9H293 177 aa11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 CNNM1Q9NRU3 951 aa11.07□□□□□ -0.64
SMARCC1-208ENST00000492896 MED23Q9ULK4 1368 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 ST18O60284 1047 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 NMIQ13287 307 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 LDHAL6AQ6ZMR3 332 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 FAM196AQ6ZSG2 479 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 KRT27Q7Z3Y8 459 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 IL17RAQ96F46 866 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 DNAJC2Q99543 621 aaKnown RBP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 SLKQ9H2G2 1235 aaPredicted RBP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 NARFQ9UHQ1 456 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 RIPOR2Q9Y4F9 1068 aa11.06□□□□□ -0.64
SMARCC1-208ENST00000492896 TAF1P21675 1872 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 HSPA4P34932 840 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 TIMM10P62072 90 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 CCDC171Q6TFL3 1326 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
SMARCC1-208ENST00000492896 TNRC6CQ9HCJ0 1690 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 MYH13Q9UKX3 1938 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 ZPR1O75312 459 aa11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 CD2BP2O95400 341 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
SMARCC1-208ENST00000492896 ADORA1P30542 326 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms