RNA–Protein interactions for RNA: ENST00000491827.1

U2SURP-213, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 3

Gene U2SURP, Length 824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-213ENST00000491827 USP17L17D6RBQ6 530 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 USP17L19D6RCP7 530 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 USP17L20D6RJB6 530 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 ARID4AP29374 1257 aaPredicted RBP7.68□□□□□ -1.18
U2SURP-213ENST00000491827 INPP5BP32019 993 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 USP17L24Q0WX57 530 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 LRP8Q14114 963 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 ANKMY2Q8IV38 441 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 DTWD1Q8N5C7 304 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 LPIN3Q9BQK8 851 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 FRRS1LQ9P0K9 344 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
U2SURP-213ENST00000491827 SASH3O75995 380 aa7.67□□□□□ -1.18
U2SURP-213ENST00000491827 MAP3K6O95382 1288 aa7.67□□□□□ -1.18
U2SURP-213ENST00000491827 TARSP26639 723 aaKnown RBP7.67□□□□□ -1.18
U2SURP-213ENST00000491827 IREB2P48200 963 aaKnown RBP7.67□□□□□ -1.18
U2SURP-213ENST00000491827 HFE2Q6ZVN8 426 aa7.67□□□□□ -1.18
U2SURP-213ENST00000491827 FBXO11Q86XK2 927 aa7.67□□□□□ -1.18
U2SURP-213ENST00000491827 PPP1R12CQ9BZL4 782 aa7.67□□□□□ -1.18
U2SURP-213ENST00000491827 MICAL2O94851 1124 aa7.66□□□□□ -1.18
U2SURP-213ENST00000491827 EIF2AK2P19525 551 aaKnown RBP7.66□□□□□ -1.18
U2SURP-213ENST00000491827 GRNP28799 593 aaKnown RBP7.66□□□□□ -1.18
U2SURP-213ENST00000491827 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
U2SURP-213ENST00000491827 TRPM4Q8TD43 1214 aa7.66□□□□□ -1.18
U2SURP-213ENST00000491827 WFDC12Q8WWY7 111 aa7.66□□□□□ -1.18
U2SURP-213ENST00000491827 IFT43Q96FT9 208 aa7.66□□□□□ -1.18
U2SURP-213ENST00000491827 SMG9Q9H0W8 520 aaKnown RBP7.66□□□□□ -1.18
U2SURP-213ENST00000491827 VRTNQ9H8Y1 702 aa7.66□□□□□ -1.18
U2SURP-213ENST00000491827 FAM196BA6NMK8 535 aa7.65□□□□□ -1.18
U2SURP-213ENST00000491827 ZBTB42B2RXF5 422 aa7.65□□□□□ -1.18
U2SURP-213ENST00000491827 GPLD1P80108 840 aa7.65□□□□□ -1.18
U2SURP-213ENST00000491827 PLAURQ03405 335 aa7.65□□□□□ -1.18
U2SURP-213ENST00000491827 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
U2SURP-213ENST00000491827 QTRT2Q9H974 415 aaKnown RBP7.65□□□□□ -1.18
U2SURP-213ENST00000491827 GRIK5Q16478 980 aa7.64□□□□□ -1.19
U2SURP-213ENST00000491827 C11orf91Q3C1V1 193 aa7.64□□□□□ -1.19
U2SURP-213ENST00000491827 IGF2-ASQ6U949 168 aa7.64□□□□□ -1.19
U2SURP-213ENST00000491827 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
U2SURP-213ENST00000491827 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
U2SURP-213ENST00000491827 USP20Q9Y2K6 914 aa7.64□□□□□ -1.19
U2SURP-213ENST00000491827 FOXO3O43524 673 aa7.63□□□□□ -1.19
U2SURP-213ENST00000491827 HYAL3O43820 417 aaPredicted RBP7.63□□□□□ -1.19
U2SURP-213ENST00000491827 NOS3P29474 1203 aa7.63□□□□□ -1.19
U2SURP-213ENST00000491827 CMTR1Q8N1G2 835 aaKnown RBP7.63□□□□□ -1.19
U2SURP-213ENST00000491827 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
U2SURP-213ENST00000491827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.63□□□□□ -1.191e-7■■■■■ 39.3
U2SURP-213ENST00000491827 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
U2SURP-213ENST00000491827 ILDR2Q71H61 639 aa7.62□□□□□ -1.19
U2SURP-213ENST00000491827 RGL4Q8IZJ4 473 aa7.62□□□□□ -1.19
U2SURP-213ENST00000491827 C11orf16Q9NQ32 467 aa7.62□□□□□ -1.19
U2SURP-213ENST00000491827 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
U2SURP-213ENST00000491827 XYLBO75191 536 aa7.61□□□□□ -1.19
U2SURP-213ENST00000491827 GHRHP01286 108 aa7.61□□□□□ -1.19
U2SURP-213ENST00000491827 PSAPP07602 524 aa7.61□□□□□ -1.19
U2SURP-213ENST00000491827 NRLP54845 237 aa7.61□□□□□ -1.19
U2SURP-213ENST00000491827 GDF6Q6KF10 455 aaPredicted RBP7.61□□□□□ -1.19
U2SURP-213ENST00000491827 TTC9Q92623 222 aa7.61□□□□□ -1.19
U2SURP-213ENST00000491827 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
U2SURP-213ENST00000491827 J3QW42 95 aa7.6□□□□□ -1.19
U2SURP-213ENST00000491827 DEAF1O75398 565 aaPredicted RBP7.6□□□□□ -1.19
U2SURP-213ENST00000491827 WEE1P30291 646 aa7.6□□□□□ -1.19
U2SURP-213ENST00000491827 FAM200AQ8TCP9 573 aa7.6□□□□□ -1.19
U2SURP-213ENST00000491827 PLD4Q96BZ4 506 aa7.6□□□□□ -1.19
U2SURP-213ENST00000491827 NSUN5Q96P11 429 aaKnown RBP7.6□□□□□ -1.19
U2SURP-213ENST00000491827 RBSNQ9H1K0 784 aa7.6□□□□□ -1.19
U2SURP-213ENST00000491827 TLR7Q9NYK1 1049 aaKnown RBP7.6□□□□□ -1.19
U2SURP-213ENST00000491827 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
U2SURP-213ENST00000491827 TREML1Q86YW5 311 aa7.59□□□□□ -1.19
U2SURP-213ENST00000491827 MYO19Q96H55 970 aa7.59□□□□□ -1.19
U2SURP-213ENST00000491827 ARXQ96QS3 562 aa7.59□□□□□ -1.19
U2SURP-213ENST00000491827 ZMYND15Q9H091 742 aa7.59□□□□□ -1.19
U2SURP-213ENST00000491827 AKTIPQ9H8T0 292 aa7.59□□□□□ -1.19
U2SURP-213ENST00000491827 LOC102724428A0A0B4J2F2 783 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 OPLAHO14841 1288 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 RFX1P22670 979 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 SIK1P57059 783 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 IL22RA1Q8N6P7 574 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 RNF112Q9ULX5 631 aa7.58□□□□□ -1.2
U2SURP-213ENST00000491827 DLL1O00548 723 aa7.57□□□□□ -1.2
U2SURP-213ENST00000491827 ALX3O95076 343 aa7.57□□□□□ -1.2
U2SURP-213ENST00000491827 CDCA8Q53HL2 280 aa7.57□□□□□ -1.2
U2SURP-213ENST00000491827 MRPL18Q9H0U6 180 aaKnown RBP7.57□□□□□ -1.2
U2SURP-213ENST00000491827 MMP20O60882 483 aa7.56□□□□□ -1.2
U2SURP-213ENST00000491827 EGFRP00533 1210 aa7.56□□□□□ -1.2
U2SURP-213ENST00000491827 DCAF11Q8TEB1 546 aa7.55□□□□□ -1.2
U2SURP-213ENST00000491827 PCMTD2Q9NV79 361 aa7.55□□□□□ -1.2
U2SURP-213ENST00000491827 GLB1P16278 677 aa7.54□□□□□ -1.2
U2SURP-213ENST00000491827 FSTP19883 344 aa7.54□□□□□ -1.2
U2SURP-213ENST00000491827 COX20Q5RI15 118 aa7.54□□□□□ -1.2
U2SURP-213ENST00000491827 PRIMPOLQ96LW4 560 aa7.54□□□□□ -1.2
U2SURP-213ENST00000491827 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
U2SURP-213ENST00000491827 KCNMB2Q9Y691 235 aa7.54□□□□□ -1.2
U2SURP-213ENST00000491827 A6NJR5 290 aa7.53□□□□□ -1.2
U2SURP-213ENST00000491827 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
U2SURP-213ENST00000491827 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
U2SURP-213ENST00000491827 SSTR4P31391 388 aa7.53□□□□□ -1.2
U2SURP-213ENST00000491827 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms