RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZNHIT6Q9NWK9 470 aaKnown RBP13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 JRKLQ9Y4A0 524 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 RHOXF2BP0C7M4 288 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 NF2P35240 595 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 RHOXF2Q9BQY4 288 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 OSBPL3Q9H4L5 887 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 CCDC181Q5TID7 509 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 GBP6Q6ZN66 633 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 CCDC8Q9H0W5 538 aaPredicted RBP13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 GRIN2AQ12879 1464 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 POLR3DP05423 398 aaPredicted RBP13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 ACTN2P35609 894 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 KCNG4Q8TDN1 519 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 PLXNC1O60486 1568 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 CYP2C19P33261 490 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 MAP2K2P36507 400 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 ATP10BO94823 1461 aa13.01□□□□□ -0.33
CRNKL1-204ENST00000490910 AOX1Q06278 1338 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 CHMP4BP1P59074 171 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
CRNKL1-204ENST00000490910 HSP90AA4PQ58FG1 418 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 XPO4Q9C0E2 1151 aaKnown RBP13□□□□□ -0.33
CRNKL1-204ENST00000490910 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
CRNKL1-204ENST00000490910 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 BANK1Q8NDB2 785 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 AK9Q5TCS8 1911 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 KIAA1328Q86T90 577 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 STK11IPQ8N1F8 1099 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 BAG1Q99933 345 aaPredicted RBP13□□□□□ -0.33
CRNKL1-204ENST00000490910 ST7Q9NRC1 585 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 A0A1W2PP64 1363 aa13□□□□□ -0.33
CRNKL1-204ENST00000490910 GOLGA6L7A0A1B0GV03 622 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 CTAGE9A4FU28 777 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 SYKP43405 635 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 PIP4K2BP78356 416 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 MLECQ14165 292 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 BRD3Q15059 726 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 ME3Q16798 604 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 AFAP1L1Q8TED9 768 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 PPP1R13BQ96KQ4 1090 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 FANCCQ00597 558 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 ERVK-7P63135 1459 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
CRNKL1-204ENST00000490910 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 A0A1B0GVL5 298 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 CCDC102BQ68D86 513 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 OTUD6BQ8N6M0 293 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 CCDC47Q96A33 483 aaKnown RBP12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 FEZ2Q9UHY8 353 aaPredicted RBP12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 ERLIN2O94905 339 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 Q6ZUG5 572 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 ATL3Q6DD88 541 aa12.98□□□□□ -0.33
CRNKL1-204ENST00000490910 MYL5Q02045 173 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 ARID5BQ14865 1188 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 PNMA6EA0A0J9YXQ4 647 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 CDKL5O76039 1030 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 FBXO18Q8NFZ0 1043 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 SPTLC2O15270 562 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 HYPKQ9NX55 129 aa12.97□□□□□ -0.33
CRNKL1-204ENST00000490910 SBNO2Q9Y2G9 1366 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 G2E3Q7L622 706 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 ZFYVE9O95405 1425 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 INPP5BP32019 993 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 ODF2Q5BJF6 829 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 PLA2G4DQ86XP0 818 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
CRNKL1-204ENST00000490910 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.34
CRNKL1-204ENST00000490910 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.34
CRNKL1-204ENST00000490910 USP27XA6NNY8 438 aa12.95□□□□□ -0.34
CRNKL1-204ENST00000490910 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
CRNKL1-204ENST00000490910 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms