RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CCER2I3L3R5 266 aa22.8■■□□□ 1.24
ABCF3-217ENST00000489719 PDE8AO60658 829 aa22.8■■□□□ 1.24
ABCF3-217ENST00000489719 EIF6P56537 245 aaKnown RBP22.8■■□□□ 1.24
ABCF3-217ENST00000489719 FKBP5Q13451 457 aaPredicted RBP22.8■■□□□ 1.24
ABCF3-217ENST00000489719 ARFGEF2Q9Y6D5 1785 aa22.79■■□□□ 1.24
ABCF3-217ENST00000489719 IQCA1LA6NCM1 817 aa22.79■■□□□ 1.24
ABCF3-217ENST00000489719 IGKV5-2P06315 115 aa22.79■■□□□ 1.24
ABCF3-217ENST00000489719 PPIP5K2O43314 1243 aa22.78■■□□□ 1.24
ABCF3-217ENST00000489719 APLP1P51693 650 aa22.78■■□□□ 1.24
ABCF3-217ENST00000489719 RPS8P62241 208 aaKnown RBP22.78■■□□□ 1.24
ABCF3-217ENST00000489719 CCDC152Q4G0S7 254 aa22.78■■□□□ 1.24
ABCF3-217ENST00000489719 SLC51AQ86UW1 340 aa22.78■■□□□ 1.24
ABCF3-217ENST00000489719 NIM1KQ8IY84 436 aa22.78■■□□□ 1.24
ABCF3-217ENST00000489719 CELF1Q92879 486 aaKnown RBP22.78■■□□□ 1.24
ABCF3-217ENST00000489719 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
ABCF3-217ENST00000489719 RTFDC1Q9BY42 306 aaPredicted RBP22.77■■□□□ 1.24
ABCF3-217ENST00000489719 ZNF541Q9H0D2 1346 aa22.77■■□□□ 1.24
ABCF3-217ENST00000489719 SNED1Q8TER0 1413 aa22.76■■□□□ 1.23
ABCF3-217ENST00000489719 NEURL1BA8MQ27 555 aa22.76■■□□□ 1.23
ABCF3-217ENST00000489719 CWF19L2Q2TBE0 894 aaKnown RBP22.76■■□□□ 1.23
ABCF3-217ENST00000489719 GPC2Q8N158 579 aa22.76■■□□□ 1.23
ABCF3-217ENST00000489719 DNAAF4Q8WXU2 420 aa22.76■■□□□ 1.23
ABCF3-217ENST00000489719 L3MBTL3Q96JM7 780 aaPredicted RBP22.76■■□□□ 1.23
ABCF3-217ENST00000489719 GJA3Q9Y6H8 435 aa22.76■■□□□ 1.23
ABCF3-217ENST00000489719 ANKRD36CQ5JPF3 1778 aa22.76■■□□□ 1.23
ABCF3-217ENST00000489719 AOC3Q16853 763 aa22.75■■□□□ 1.23
ABCF3-217ENST00000489719 NSFL1CQ9UNZ2 370 aaKnown RBP22.75■■□□□ 1.23
ABCF3-217ENST00000489719 ZNF521Q96K83 1311 aa22.75■■□□□ 1.23
ABCF3-217ENST00000489719 CCDC88AQ3V6T2 1871 aa22.75■■□□□ 1.23
ABCF3-217ENST00000489719 E9PSI1 815 aa22.74■■□□□ 1.23
ABCF3-217ENST00000489719 CCDC85AQ96PX6 553 aaPredicted RBP22.74■■□□□ 1.23
ABCF3-217ENST00000489719 HACL1Q9UJ83 578 aa22.74■■□□□ 1.23
ABCF3-217ENST00000489719 CDHR2Q9BYE9 1310 aa22.74■■□□□ 1.23
ABCF3-217ENST00000489719 SEC31BQ9NQW1 1179 aa22.73■■□□□ 1.23
ABCF3-217ENST00000489719 ZNRF3Q9ULT6 936 aa22.73■■□□□ 1.23
ABCF3-217ENST00000489719 C6orf229H3BNL8 230 aa22.72■■□□□ 1.23
ABCF3-217ENST00000489719 H7C1W4 665 aa22.72■■□□□ 1.23
ABCF3-217ENST00000489719 GCKRQ14397 625 aa22.72■■□□□ 1.23
ABCF3-217ENST00000489719 LINS1Q8NG48 757 aa22.72■■□□□ 1.23
ABCF3-217ENST00000489719 TAF1DQ9H5J8 278 aaPredicted RBP22.72■■□□□ 1.23
ABCF3-217ENST00000489719 KIAA2012Q0VF49 1180 aa22.71■■□□□ 1.23
ABCF3-217ENST00000489719 TIAM2Q8IVF5 1701 aa22.71■■□□□ 1.23
ABCF3-217ENST00000489719 CTSWP56202 376 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 GPSM2P81274 684 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 WASHC4Q2M389 1173 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 CHADLQ6NUI6 762 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 UBE3BQ7Z3V4 1068 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 ANKRD18AQ8IVF6 992 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 CLEC11AQ9Y240 323 aa22.7■■□□□ 1.22
ABCF3-217ENST00000489719 DICER1Q9UPY3 1922 aaKnown RBP22.7■■□□□ 1.22
ABCF3-217ENST00000489719 LMOD1P29536 600 aaPredicted RBP22.69■■□□□ 1.22
ABCF3-217ENST00000489719 EPHX2P34913 555 aa22.69■■□□□ 1.22
ABCF3-217ENST00000489719 EAPPQ56P03 285 aaPredicted RBP22.69■■□□□ 1.22
ABCF3-217ENST00000489719 PNMA8AQ86V59 439 aaPredicted RBP22.69■■□□□ 1.22
ABCF3-217ENST00000489719 TTLL11Q8NHH1 800 aa22.69■■□□□ 1.22
ABCF3-217ENST00000489719 CDC5LQ99459 802 aaKnown RBP22.69■■□□□ 1.22
ABCF3-217ENST00000489719 EYA3Q99504 573 aa22.69■■□□□ 1.22
ABCF3-217ENST00000489719 WDR90Q96KV7 1748 aa22.68■■□□□ 1.22
ABCF3-217ENST00000489719 F6X3S4 739 aa22.68■■□□□ 1.22
ABCF3-217ENST00000489719 SLFN5Q08AF3 891 aa22.68■■□□□ 1.22
ABCF3-217ENST00000489719 LDHDQ86WU2 507 aa22.68■■□□□ 1.22
ABCF3-217ENST00000489719 ANKIB1Q9P2G1 1089 aa22.68■■□□□ 1.22
ABCF3-217ENST00000489719 RIMBP2O15034 1052 aa22.67■■□□□ 1.22
ABCF3-217ENST00000489719 CXCL9Q07325 125 aa22.67■■□□□ 1.22
ABCF3-217ENST00000489719 TNIP1Q15025 636 aa22.67■■□□□ 1.22
ABCF3-217ENST00000489719 POLLQ9UGP5 575 aa22.67■■□□□ 1.22
ABCF3-217ENST00000489719 POTEIP0CG38 1075 aa22.66■■□□□ 1.22
ABCF3-217ENST00000489719 POTEJP0CG39 1038 aa22.66■■□□□ 1.22
ABCF3-217ENST00000489719 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
ABCF3-217ENST00000489719 ZC3H12CQ9C0D7 883 aaKnown RBP22.66■■□□□ 1.22
ABCF3-217ENST00000489719 G3V3G9 751 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 BEND3Q5T5X7 828 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 DCAF8Q5TAQ9 597 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 DIEXFQ68CQ4 756 aaKnown RBP22.65■■□□□ 1.22
ABCF3-217ENST00000489719 SLC4A10Q6U841 1118 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 TBC1D16Q8TBP0 767 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 GREM2Q9H772 168 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 PODXL2Q9NZ53 605 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 GGA1Q9UJY5 639 aa22.65■■□□□ 1.22
ABCF3-217ENST00000489719 RAD17O75943 681 aa22.64■■□□□ 1.21
ABCF3-217ENST00000489719 CDCA7LQ96GN5 454 aa22.64■■□□□ 1.21
ABCF3-217ENST00000489719 PLA2G12BQ9BX93 195 aa22.64■■□□□ 1.21
ABCF3-217ENST00000489719 DDX60Q8IY21 1712 aaKnown RBP22.63■■□□□ 1.21
ABCF3-217ENST00000489719 UFL1O94874 794 aa22.63■■□□□ 1.21
ABCF3-217ENST00000489719 HTRA3P83110 453 aa22.63■■□□□ 1.21
ABCF3-217ENST00000489719 BCL2L13Q9BXK5 485 aa22.63■■□□□ 1.21
ABCF3-217ENST00000489719 LAMB2P55268 1798 aa22.63■■□□□ 1.21
ABCF3-217ENST00000489719 COL4A5P29400 1685 aa22.62■■□□□ 1.21
ABCF3-217ENST00000489719 IGHMBP2P38935 993 aaKnown RBP22.62■■□□□ 1.21
ABCF3-217ENST00000489719 EPS15P42566 896 aa22.62■■□□□ 1.21
ABCF3-217ENST00000489719 SCNN1DP51172 638 aa22.62■■□□□ 1.21
ABCF3-217ENST00000489719 CASP7P55210 303 aa22.62■■□□□ 1.21
ABCF3-217ENST00000489719 MRPL50Q8N5N7 158 aaKnown RBP22.62■■□□□ 1.21
ABCF3-217ENST00000489719 DNAJC5GQ8N7S2 189 aa22.62■■□□□ 1.21
ABCF3-217ENST00000489719 BSDC1Q9NW68 430 aaPredicted RBP22.62■■□□□ 1.21
ABCF3-217ENST00000489719 C9orf78Q9NZ63 289 aaPredicted RBP22.62■■□□□ 1.21
ABCF3-217ENST00000489719 CSF1RP07333 972 aa22.61■■□□□ 1.21
ABCF3-217ENST00000489719 DOK7Q18PE1 504 aa22.61■■□□□ 1.21
ABCF3-217ENST00000489719 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
ABCF3-217ENST00000489719 DBNDD1Q9H9R9 158 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 291.6 ms