RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TOB2Q14106 344 aaPredicted RBP23.05■■□□□ 1.28
HMG20B-213ENST00000488973 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
HMG20B-213ENST00000488973 TEX2Q8IWB9 1127 aa23.05■■□□□ 1.28
HMG20B-213ENST00000488973 EAF2Q96CJ1 260 aaPredicted RBP23.05■■□□□ 1.28
HMG20B-213ENST00000488973 G3BP1Q13283 466 aaKnown RBP eCLIP23.04■■□□□ 1.28
HMG20B-213ENST00000488973 SYCP1Q15431 976 aa23.04■■□□□ 1.28
HMG20B-213ENST00000488973 LARP1Q6PKG0 1096 aaKnown RBP23.04■■□□□ 1.28
HMG20B-213ENST00000488973 UTYO14607 1347 aa23.04■■□□□ 1.28
HMG20B-213ENST00000488973 A0A0D9SFI3 127 aa23.04■■□□□ 1.28
HMG20B-213ENST00000488973 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
HMG20B-213ENST00000488973 CAVIN2O95810 425 aa23.04■■□□□ 1.28
HMG20B-213ENST00000488973 NBPF6Q5VWK0 638 aa23.04■■□□□ 1.28
HMG20B-213ENST00000488973 NBPF4Q96M43 638 aa23.04■■□□□ 1.28
HMG20B-213ENST00000488973 CHRM1P11229 460 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-213ENST00000488973 COL9A3Q14050 684 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-213ENST00000488973 DRC7Q8IY82 874 aa23.03■■□□□ 1.28
HMG20B-213ENST00000488973 MYH15Q9Y2K3 1946 aa23.03■■□□□ 1.28
HMG20B-213ENST00000488973 TRIM5Q9C035 493 aa23.03■■□□□ 1.28
HMG20B-213ENST00000488973 TFIP11Q9UBB9 837 aaKnown RBP23.03■■□□□ 1.28
HMG20B-213ENST00000488973 FSD1Q9BTV5 496 aa23.02■■□□□ 1.28
HMG20B-213ENST00000488973 NFAT5O94916 1531 aa23.02■■□□□ 1.28
HMG20B-213ENST00000488973 GRM8O00222 908 aa23.02■■□□□ 1.28
HMG20B-213ENST00000488973 CWF19L2Q2TBE0 894 aaKnown RBP23.02■■□□□ 1.28
HMG20B-213ENST00000488973 ZSCAN25Q6NSZ9 544 aa23.02■■□□□ 1.28
HMG20B-213ENST00000488973 LINS1Q8NG48 757 aa23.02■■□□□ 1.28
HMG20B-213ENST00000488973 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
HMG20B-213ENST00000488973 OVOS2A0A0G2JMS6 1433 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 NCAPD2Q15021 1401 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 SMTNL1A8MU46 457 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 KAZALD1Q96I82 304 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 SUCLG2Q96I99 432 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 TCEANC2Q96MN5 208 aa23.01■■□□□ 1.27
HMG20B-213ENST00000488973 PHRF1Q9P1Y6 1649 aaKnown RBP23.01■■□□□ 1.27
HMG20B-213ENST00000488973 VGLL3A8MV65 326 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 NR1I2O75469 434 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 CDC25BP30305 580 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 ZNF165P49910 485 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 LRMPQ12912 555 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 KRT32Q14532 448 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 ZNF530Q6P9A1 599 aaPredicted RBP23■■□□□ 1.27
HMG20B-213ENST00000488973 PLCD3Q8N3E9 789 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23■■□□□ 1.27
HMG20B-213ENST00000488973 PLEKHO1Q53GL0 409 aaPredicted RBP23■■□□□ 1.27
HMG20B-213ENST00000488973 RBM33Q96EV2 1170 aaKnown RBP23■■□□□ 1.27
HMG20B-213ENST00000488973 PGBD1Q96JS3 809 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 BOLA2Q9H3K6 86 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 NRBP1Q9UHY1 535 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 MRC1P22897 1456 aa23■■□□□ 1.27
HMG20B-213ENST00000488973 PROSER3Q2NL68 480 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 USPL1Q5W0Q7 1092 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 FEZ1Q99689 392 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 BICC1Q9H694 974 aaKnown RBP22.99■■□□□ 1.27
HMG20B-213ENST00000488973 PAXBP1Q9Y5B6 917 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 BICD2Q8TD16 824 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 GTF3C6Q969F1 213 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 TAF6LQ9Y6J9 622 aa22.99■■□□□ 1.27
HMG20B-213ENST00000488973 SIPA1L3O60292 1781 aaPredicted RBP22.98■■□□□ 1.27
HMG20B-213ENST00000488973 CDK11BP21127 795 aaKnown RBP22.98■■□□□ 1.27
HMG20B-213ENST00000488973 MPRIPQ6WCQ1 1025 aa22.98■■□□□ 1.27
HMG20B-213ENST00000488973 TLR7Q9NYK1 1049 aaKnown RBP22.98■■□□□ 1.27
HMG20B-213ENST00000488973 RNMTO43148 476 aaKnown RBP22.98■■□□□ 1.27
HMG20B-213ENST00000488973 RESTQ13127 1097 aa22.98■■□□□ 1.27
HMG20B-213ENST00000488973 AMOTQ4VCS5 1084 aa22.98■■□□□ 1.27
HMG20B-213ENST00000488973 ZFP91Q96JP5 570 aaPredicted RBP22.98■■□□□ 1.27
HMG20B-213ENST00000488973 ZSCAN16Q9H4T2 348 aaPredicted RBP22.98■■□□□ 1.27
HMG20B-213ENST00000488973 TAF5LO75529 589 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 BRD2P25440 801 aaKnown RBP22.97■■□□□ 1.27
HMG20B-213ENST00000488973 NCBP1Q09161 790 aaKnown RBP22.97■■□□□ 1.27
HMG20B-213ENST00000488973 C16orf45Q96MC5 204 aaPredicted RBP22.97■■□□□ 1.27
HMG20B-213ENST00000488973 DNAJC25Q9H1X3 360 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
HMG20B-213ENST00000488973 TNNT1P13805 278 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 STK3Q13188 491 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 C14orf37Q86TY3 774 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 ZNF589Q86UQ0 364 aaPredicted RBP22.97■■□□□ 1.27
HMG20B-213ENST00000488973 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 CFAP45Q9UL16 551 aa22.97■■□□□ 1.27
HMG20B-213ENST00000488973 U2AF2P26368 475 aaKnown RBP eCLIP22.96■■□□□ 1.274e-7■■■■□ 20.4
HMG20B-213ENST00000488973 ESCO1Q5FWF5 840 aa22.96■■□□□ 1.27
HMG20B-213ENST00000488973 SARM1Q6SZW1 724 aa22.96■■□□□ 1.27
HMG20B-213ENST00000488973 SLC20A2Q08357 652 aa22.94■■□□□ 1.26
HMG20B-213ENST00000488973 CACTINQ8WUQ7 758 aaKnown RBP22.94■■□□□ 1.26
HMG20B-213ENST00000488973 BRF1Q92994 677 aa22.94■■□□□ 1.26
HMG20B-213ENST00000488973 SPDYE4A6NLX3 237 aa22.94■■□□□ 1.26
HMG20B-213ENST00000488973 PROSER2Q86WR7 435 aaPredicted RBP22.94■■□□□ 1.26
HMG20B-213ENST00000488973 NEK1Q96PY6 1258 aa22.94■■□□□ 1.26
HMG20B-213ENST00000488973 JAK2O60674 1132 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 C1orf141Q5JVX7 400 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 CTAGE5O15320 804 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 NEMFO60524 1076 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 IQCB1Q15051 598 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 DDX21Q9NR30 783 aaKnown RBP eCLIP22.93■■□□□ 1.26
HMG20B-213ENST00000488973 RFX7Q2KHR2 1363 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 LAMA4Q16363 1823 aa22.93■■□□□ 1.26
HMG20B-213ENST00000488973 H3BQV1 296 aa22.92■■□□□ 1.26
HMG20B-213ENST00000488973 IFFO2Q5TF58 517 aa22.92■■□□□ 1.26
HMG20B-213ENST00000488973 MRFAP1L1Q96HT8 127 aa22.92■■□□□ 1.26
HMG20B-213ENST00000488973 OGFRQ9NZT2 677 aa22.92■■□□□ 1.26
HMG20B-213ENST00000488973 PXDNQ92626 1479 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms