RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PCCAP05165 728 aaPredicted RBP22.75■■□□□ 1.23
ITGB1-215ENST00000488494 FLIIQ13045 1269 aa22.75■■□□□ 1.23
ITGB1-215ENST00000488494 SF3B3Q15393 1217 aaKnown RBP22.75■■□□□ 1.23
ITGB1-215ENST00000488494 DUOX1Q9NRD9 1551 aa22.75■■□□□ 1.23
ITGB1-215ENST00000488494 VAMP4O75379 141 aa22.74■■□□□ 1.23
ITGB1-215ENST00000488494 IGKV5-2P06315 115 aa22.74■■□□□ 1.23
ITGB1-215ENST00000488494 FSTL1Q12841 308 aa22.74■■□□□ 1.23
ITGB1-215ENST00000488494 LARGE2Q8N3Y3 721 aa22.74■■□□□ 1.23
ITGB1-215ENST00000488494 JDP2Q8WYK2 163 aa22.74■■□□□ 1.23
ITGB1-215ENST00000488494 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
ITGB1-215ENST00000488494 FZD9O00144 591 aa22.73■■□□□ 1.23
ITGB1-215ENST00000488494 NEXNQ0ZGT2 675 aa22.73■■□□□ 1.23
ITGB1-215ENST00000488494 DPP8Q6V1X1 898 aaPredicted RBP22.73■■□□□ 1.23
ITGB1-215ENST00000488494 SP8Q8IXZ3 490 aa22.73■■□□□ 1.23
ITGB1-215ENST00000488494 SMC1BQ8NDV3 1235 aa22.73■■□□□ 1.23
ITGB1-215ENST00000488494 PPIP5K2O43314 1243 aa22.72■■□□□ 1.23
ITGB1-215ENST00000488494 HSP90B1P14625 803 aaKnown RBP22.72■■□□□ 1.23
ITGB1-215ENST00000488494 FKBP5Q13451 457 aaPredicted RBP22.72■■□□□ 1.23
ITGB1-215ENST00000488494 AOC3Q16853 763 aa22.72■■□□□ 1.23
ITGB1-215ENST00000488494 CWF19L2Q2TBE0 894 aaKnown RBP22.72■■□□□ 1.23
ITGB1-215ENST00000488494 CELF1Q92879 486 aaKnown RBP22.72■■□□□ 1.23
ITGB1-215ENST00000488494 L3MBTL3Q96JM7 780 aaPredicted RBP22.72■■□□□ 1.23
ITGB1-215ENST00000488494 TMC4Q7Z404 712 aa22.71■■□□□ 1.23
ITGB1-215ENST00000488494 MPNDQ8N594 471 aa22.71■■□□□ 1.23
ITGB1-215ENST00000488494 RTFDC1Q9BY42 306 aaPredicted RBP22.71■■□□□ 1.23
ITGB1-215ENST00000488494 SCN4AP35499 1836 aa22.71■■□□□ 1.23
ITGB1-215ENST00000488494 NEURL1BA8MQ27 555 aa22.7■■□□□ 1.22
ITGB1-215ENST00000488494 APLP1P51693 650 aa22.7■■□□□ 1.22
ITGB1-215ENST00000488494 NIM1KQ8IY84 436 aa22.7■■□□□ 1.22
ITGB1-215ENST00000488494 SUPT20HQ8NEM7 779 aa22.7■■□□□ 1.22
ITGB1-215ENST00000488494 CDHR2Q9BYE9 1310 aa22.7■■□□□ 1.22
ITGB1-215ENST00000488494 CACNA1FO60840 1977 aa22.69■■□□□ 1.22
ITGB1-215ENST00000488494 LTBP1Q14766 1721 aa22.69■■□□□ 1.22
ITGB1-215ENST00000488494 IQCA1LA6NCM1 817 aa22.69■■□□□ 1.22
ITGB1-215ENST00000488494 PDE8AO60658 829 aa22.68■■□□□ 1.22
ITGB1-215ENST00000488494 EIF6P56537 245 aaKnown RBP22.68■■□□□ 1.22
ITGB1-215ENST00000488494 CCDC152Q4G0S7 254 aa22.68■■□□□ 1.22
ITGB1-215ENST00000488494 GPC2Q8N158 579 aa22.68■■□□□ 1.22
ITGB1-215ENST00000488494 DNAAF4Q8WXU2 420 aa22.68■■□□□ 1.22
ITGB1-215ENST00000488494 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
ITGB1-215ENST00000488494 CCER2I3L3R5 266 aa22.67■■□□□ 1.22
ITGB1-215ENST00000488494 SEC31BQ9NQW1 1179 aa22.67■■□□□ 1.22
ITGB1-215ENST00000488494 GJA3Q9Y6H8 435 aa22.67■■□□□ 1.22
ITGB1-215ENST00000488494 CTSWP56202 376 aa22.66■■□□□ 1.22
ITGB1-215ENST00000488494 UBE3BQ7Z3V4 1068 aa22.66■■□□□ 1.22
ITGB1-215ENST00000488494 VPS33BQ9H267 617 aa22.66■■□□□ 1.22
ITGB1-215ENST00000488494 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
ITGB1-215ENST00000488494 MYH3P11055 1940 aa22.65■■□□□ 1.22
ITGB1-215ENST00000488494 POTEIP0CG38 1075 aa22.65■■□□□ 1.22
ITGB1-215ENST00000488494 POTEJP0CG39 1038 aa22.65■■□□□ 1.22
ITGB1-215ENST00000488494 KIAA2012Q0VF49 1180 aa22.65■■□□□ 1.22
ITGB1-215ENST00000488494 HACL1Q9UJ83 578 aa22.65■■□□□ 1.22
ITGB1-215ENST00000488494 RPS8P62241 208 aaKnown RBP22.64■■□□□ 1.21
ITGB1-215ENST00000488494 GPSM2P81274 684 aa22.64■■□□□ 1.21
ITGB1-215ENST00000488494 GCKRQ14397 625 aa22.64■■□□□ 1.21
ITGB1-215ENST00000488494 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
ITGB1-215ENST00000488494 ADAMTSL1Q8N6G6 1762 aa22.63■■□□□ 1.21
ITGB1-215ENST00000488494 E9PSI1 815 aa22.63■■□□□ 1.21
ITGB1-215ENST00000488494 LINS1Q8NG48 757 aa22.63■■□□□ 1.21
ITGB1-215ENST00000488494 ZNRF3Q9ULT6 936 aa22.63■■□□□ 1.21
ITGB1-215ENST00000488494 SPEF2Q9C093 1822 aa22.63■■□□□ 1.21
ITGB1-215ENST00000488494 F6X3S4 739 aa22.62■■□□□ 1.21
ITGB1-215ENST00000488494 EPHX2P34913 555 aa22.62■■□□□ 1.21
ITGB1-215ENST00000488494 HTRA3P83110 453 aa22.62■■□□□ 1.21
ITGB1-215ENST00000488494 EAPPQ56P03 285 aaPredicted RBP22.62■■□□□ 1.21
ITGB1-215ENST00000488494 CHADLQ6NUI6 762 aa22.62■■□□□ 1.21
ITGB1-215ENST00000488494 H7C1W4 665 aa22.61■■□□□ 1.21
ITGB1-215ENST00000488494 LDHDQ86WU2 507 aa22.61■■□□□ 1.21
ITGB1-215ENST00000488494 C6orf229H3BNL8 230 aa22.6■■□□□ 1.21
ITGB1-215ENST00000488494 LMOD1P29536 600 aaPredicted RBP22.6■■□□□ 1.21
ITGB1-215ENST00000488494 ANKRD18AQ8IVF6 992 aa22.6■■□□□ 1.21
ITGB1-215ENST00000488494 TTLL11Q8NHH1 800 aa22.6■■□□□ 1.21
ITGB1-215ENST00000488494 GREM2Q9H772 168 aa22.6■■□□□ 1.21
ITGB1-215ENST00000488494 POLLQ9UGP5 575 aa22.6■■□□□ 1.21
ITGB1-215ENST00000488494 RTL9Q8NET4 1388 aa22.6■■□□□ 1.21
ITGB1-215ENST00000488494 SCNN1DP51172 638 aa22.59■■□□□ 1.21
ITGB1-215ENST00000488494 CASP7P55210 303 aa22.59■■□□□ 1.21
ITGB1-215ENST00000488494 CXCL9Q07325 125 aa22.59■■□□□ 1.21
ITGB1-215ENST00000488494 WASHC4Q2M389 1173 aa22.59■■□□□ 1.21
ITGB1-215ENST00000488494 GPR101Q96P66 508 aaPredicted RBP22.59■■□□□ 1.21
ITGB1-215ENST00000488494 CDC5LQ99459 802 aaKnown RBP22.59■■□□□ 1.21
ITGB1-215ENST00000488494 SLFN5Q08AF3 891 aa22.58■■□□□ 1.21
ITGB1-215ENST00000488494 BEND3Q5T5X7 828 aa22.58■■□□□ 1.21
ITGB1-215ENST00000488494 TBC1D16Q8TBP0 767 aa22.58■■□□□ 1.21
ITGB1-215ENST00000488494 ANKIB1Q9P2G1 1089 aa22.58■■□□□ 1.21
ITGB1-215ENST00000488494 RIMBP2O15034 1052 aa22.57■■□□□ 1.2
ITGB1-215ENST00000488494 RAD17O75943 681 aa22.57■■□□□ 1.2
ITGB1-215ENST00000488494 UFL1O94874 794 aa22.57■■□□□ 1.2
ITGB1-215ENST00000488494 CDCA7LQ96GN5 454 aa22.57■■□□□ 1.2
ITGB1-215ENST00000488494 YDJCA8MPS7 323 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 FAM161AQ3B820 660 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 CIAPIN1Q6FI81 312 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
ITGB1-215ENST00000488494 EYA3Q99504 573 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 PLA2G12BQ9BX93 195 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 DBNDD1Q9H9R9 158 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 PODXL2Q9NZ53 605 aa22.56■■□□□ 1.2
ITGB1-215ENST00000488494 EPS15P42566 896 aa22.55■■□□□ 1.2
ITGB1-215ENST00000488494 GMPSP49915 693 aaPredicted RBP22.55■■□□□ 1.2
ITGB1-215ENST00000488494 GGA1Q9UJY5 639 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms