RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 VPS33BQ9H267 617 aa24.96■■□□□ 1.59
CD55-209ENST00000488171 LRRC37AA6NMS7 1700 aa24.96■■□□□ 1.59
CD55-209ENST00000488171 LTBP1Q14766 1721 aa24.95■■□□□ 1.59
CD55-209ENST00000488171 NCBP3Q53F19 620 aaKnown RBP24.95■■□□□ 1.59
CD55-209ENST00000488171 NIM1KQ8IY84 436 aa24.95■■□□□ 1.59
CD55-209ENST00000488171 GJA3Q9Y6H8 435 aa24.95■■□□□ 1.59
CD55-209ENST00000488171 COL4A1P02462 1669 aa24.95■■□□□ 1.58
CD55-209ENST00000488171 EAPPQ56P03 285 aaPredicted RBP24.94■■□□□ 1.58
CD55-209ENST00000488171 DPP8Q6V1X1 898 aaPredicted RBP24.94■■□□□ 1.58
CD55-209ENST00000488171 MPNDQ8N594 471 aa24.94■■□□□ 1.58
CD55-209ENST00000488171 SUPT20HQ8NEM7 779 aa24.94■■□□□ 1.58
CD55-209ENST00000488171 MYD88Q99836 296 aa24.94■■□□□ 1.58
CD55-209ENST00000488171 DUOX1Q9NRD9 1551 aa24.94■■□□□ 1.58
CD55-209ENST00000488171 IRS4O14654 1257 aaPredicted RBP24.93■■□□□ 1.58
CD55-209ENST00000488171 CHMP4AQ9BY43 222 aa24.93■■□□□ 1.58
CD55-209ENST00000488171 IL16Q14005 1332 aa24.93■■□□□ 1.58
CD55-209ENST00000488171 TMC4Q7Z404 712 aa24.93■■□□□ 1.58
CD55-209ENST00000488171 ZBTB38Q8NAP3 1195 aaPredicted RBP24.93■■□□□ 1.58
CD55-209ENST00000488171 CELF1Q92879 486 aaKnown RBP24.93■■□□□ 1.58
CD55-209ENST00000488171 PASKQ96RG2 1323 aa24.92■■□□□ 1.58
CD55-209ENST00000488171 SCNN1DP51172 638 aa24.92■■□□□ 1.58
CD55-209ENST00000488171 PNMA8AQ86V59 439 aaPredicted RBP24.92■■□□□ 1.58
CD55-209ENST00000488171 METTL22Q9BUU2 404 aaPredicted RBP24.92■■□□□ 1.58
CD55-209ENST00000488171 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
CD55-209ENST00000488171 CCDC191Q8NCU4 936 aa24.91■■□□□ 1.58
CD55-209ENST00000488171 DDX58O95786 925 aaKnown RBP24.9■■□□□ 1.58
CD55-209ENST00000488171 ITGBL1O95965 494 aaPredicted RBP24.9■■□□□ 1.58
CD55-209ENST00000488171 TWISTNBQ3B726 338 aaPredicted RBP24.9■■□□□ 1.58
CD55-209ENST00000488171 CREBZFQ9NS37 354 aa24.9■■□□□ 1.58
CD55-209ENST00000488171 ZNRF3Q9ULT6 936 aa24.9■■□□□ 1.58
CD55-209ENST00000488171 CLEC11AQ9Y240 323 aa24.9■■□□□ 1.58
CD55-209ENST00000488171 MAP3K2Q9Y2U5 619 aa24.89■■□□□ 1.57
CD55-209ENST00000488171 PCCAP05165 728 aaPredicted RBP24.88■■□□□ 1.57
CD55-209ENST00000488171 EPS15P42566 896 aa24.88■■□□□ 1.57
CD55-209ENST00000488171 CXCL9Q07325 125 aa24.88■■□□□ 1.57
CD55-209ENST00000488171 CWC25Q9NXE8 425 aaPredicted RBP24.88■■□□□ 1.57
CD55-209ENST00000488171 LMOD1P29536 600 aaPredicted RBP24.87■■□□□ 1.57
CD55-209ENST00000488171 KSR2Q6VAB6 950 aa24.87■■□□□ 1.57
CD55-209ENST00000488171 JARID2Q92833 1246 aaPredicted RBP24.87■■□□□ 1.57
CD55-209ENST00000488171 STK31Q9BXU1 1019 aa24.87■■□□□ 1.57
CD55-209ENST00000488171 PI4KAP2A4QPH2 592 aa24.86■■□□□ 1.57
CD55-209ENST00000488171 MAP1SQ66K74 1059 aaPredicted RBP24.86■■□□□ 1.57
CD55-209ENST00000488171 PI4KAP1Q8N8J0 262 aa24.86■■□□□ 1.57
CD55-209ENST00000488171 SALL2Q9Y467 1007 aaPredicted RBP24.86■■□□□ 1.57
CD55-209ENST00000488171 FANCIQ9NVI1 1328 aa24.86■■□□□ 1.57
CD55-209ENST00000488171 IGKV5-2P06315 115 aa24.85■■□□□ 1.57
CD55-209ENST00000488171 HSP90B1P14625 803 aaKnown RBP24.85■■□□□ 1.57
CD55-209ENST00000488171 G2E3Q7L622 706 aa24.85■■□□□ 1.57
CD55-209ENST00000488171 RPS8P62241 208 aaKnown RBP24.84■■□□□ 1.57
CD55-209ENST00000488171 GPSM2P81274 684 aa24.84■■□□□ 1.57
CD55-209ENST00000488171 WDR63Q8IWG1 891 aa24.84■■□□□ 1.57
CD55-209ENST00000488171 CNTROBQ8N137 903 aa24.84■■□□□ 1.57
CD55-209ENST00000488171 SEC31BQ9NQW1 1179 aa24.84■■□□□ 1.57
CD55-209ENST00000488171 NSFL1CQ9UNZ2 370 aaKnown RBP24.84■■□□□ 1.57
CD55-209ENST00000488171 PDE8AO60658 829 aa24.83■■□□□ 1.57
CD55-209ENST00000488171 GPRC5DQ9NZD1 345 aa24.83■■□□□ 1.57
CD55-209ENST00000488171 YDJCA8MPS7 323 aa24.82■■□□□ 1.56
CD55-209ENST00000488171 SLC4A2P04920 1241 aa24.82■■□□□ 1.56
CD55-209ENST00000488171 CIAPIN1Q6FI81 312 aa24.82■■□□□ 1.56
CD55-209ENST00000488171 POLLQ9UGP5 575 aa24.82■■□□□ 1.56
CD55-209ENST00000488171 CDHR2Q9BYE9 1310 aa24.81■■□□□ 1.56
CD55-209ENST00000488171 RAD17O75943 681 aa24.81■■□□□ 1.56
CD55-209ENST00000488171 WASHC4Q2M389 1173 aa24.81■■□□□ 1.56
CD55-209ENST00000488171 CCDC152Q4G0S7 254 aa24.81■■□□□ 1.56
CD55-209ENST00000488171 USP50Q70EL3 339 aaPredicted RBP24.81■■□□□ 1.56
CD55-209ENST00000488171 PCNTO95613 3336 aa24.8■■□□□ 1.56
CD55-209ENST00000488171 GMPSP49915 693 aaPredicted RBP24.8■■□□□ 1.56
CD55-209ENST00000488171 MKRN1Q9UHC7 482 aaKnown RBP24.8■■□□□ 1.56
CD55-209ENST00000488171 TMEM88BA6NKF7 163 aa24.8■■□□□ 1.56
CD55-209ENST00000488171 CWF19L2Q2TBE0 894 aaKnown RBP24.8■■□□□ 1.56
CD55-209ENST00000488171 IFFO2Q5TF58 517 aa24.8■■□□□ 1.56
CD55-209ENST00000488171 CCDC85AQ96PX6 553 aaPredicted RBP24.8■■□□□ 1.56
CD55-209ENST00000488171 ADARB2Q9NS39 739 aaKnown RBP24.8■■□□□ 1.56
CD55-209ENST00000488171 CNTNAP1P78357 1384 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 NEURL1BA8MQ27 555 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 C6orf229H3BNL8 230 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 VAMP4O75379 141 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 NEXNQ0ZGT2 675 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 TNIP1Q15025 636 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 TBC1D16Q8TBP0 767 aa24.79■■□□□ 1.56
CD55-209ENST00000488171 SPINK5Q9NQ38 1064 aaPredicted RBP24.79■■□□□ 1.56
CD55-209ENST00000488171 RIMBP2O15034 1052 aa24.78■■□□□ 1.56
CD55-209ENST00000488171 EXOSC9Q06265 439 aaKnown RBP24.78■■□□□ 1.56
CD55-209ENST00000488171 FLIIQ13045 1269 aa24.78■■□□□ 1.56
CD55-209ENST00000488171 DBNDD1Q9H9R9 158 aa24.78■■□□□ 1.56
CD55-209ENST00000488171 PODXL2Q9NZ53 605 aa24.78■■□□□ 1.56
CD55-209ENST00000488171 CTSWP56202 376 aa24.77■■□□□ 1.56
CD55-209ENST00000488171 GPR101Q96P66 508 aaPredicted RBP24.77■■□□□ 1.56
CD55-209ENST00000488171 EYA3Q99504 573 aa24.76■■□□□ 1.55
CD55-209ENST00000488171 BCL2L13Q9BXK5 485 aa24.76■■□□□ 1.55
CD55-209ENST00000488171 CACNA1FO60840 1977 aa24.75■■□□□ 1.55
CD55-209ENST00000488171 MYH3P11055 1940 aa24.75■■□□□ 1.55
CD55-209ENST00000488171 FMR1Q06787 632 aaKnown RBP eCLIP24.75■■□□□ 1.55
CD55-209ENST00000488171 TTLL11Q8NHH1 800 aa24.75■■□□□ 1.55
CD55-209ENST00000488171 H7C1W4 665 aa24.74■■□□□ 1.55
CD55-209ENST00000488171 HSPA1AP0DMV8 641 aaKnown RBP24.74■■□□□ 1.55
CD55-209ENST00000488171 HSPA1BP0DMV9 641 aaKnown RBP24.74■■□□□ 1.55
CD55-209ENST00000488171 ANKRD18AQ8IVF6 992 aa24.74■■□□□ 1.55
CD55-209ENST00000488171 SHTN1A0MZ66 631 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms