RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MLLT1Q03111 559 aaPredicted RBP9.28□□□□□ -0.92
SMC4-219ENST00000487747 FAM26DQ5JW98 314 aa9.28□□□□□ -0.92
SMC4-219ENST00000487747 ACIN1Q9UKV3 1341 aaKnown RBP9.28□□□□□ -0.92
SMC4-219ENST00000487747 A0A0A0MRY4 1105 aa9.27□□□□□ -0.93
SMC4-219ENST00000487747 APBA3O96018 575 aa9.27□□□□□ -0.93
SMC4-219ENST00000487747 CPB1P15086 417 aa9.27□□□□□ -0.93
SMC4-219ENST00000487747 ILDR2Q71H61 639 aa9.27□□□□□ -0.93
SMC4-219ENST00000487747 FAM35AQ86V20 835 aa9.27□□□□□ -0.93
SMC4-219ENST00000487747 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
SMC4-219ENST00000487747 RTCBQ9Y3I0 505 aaKnown RBP9.27□□□□□ -0.93
SMC4-219ENST00000487747 MAP3K6O95382 1288 aa9.26□□□□□ -0.93
SMC4-219ENST00000487747 DHX32Q7L7V1 743 aaKnown RBP9.26□□□□□ -0.93
SMC4-219ENST00000487747 RGL4Q8IZJ4 473 aa9.26□□□□□ -0.93
SMC4-219ENST00000487747 TPSG1Q9NRR2 321 aa9.26□□□□□ -0.93
SMC4-219ENST00000487747 RGS9O75916 674 aaPredicted RBP9.25□□□□□ -0.93
SMC4-219ENST00000487747 RARAP10276 462 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 SELPP16109 830 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 ELOAQ14241 798 aaKnown RBP9.25□□□□□ -0.93
SMC4-219ENST00000487747 GRIK5Q16478 980 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 SWI5Q1ZZU3 235 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 PERM1Q5SV97 790 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 ETFBKMTQ8IXQ9 262 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 DMRTC2Q8IXT2 367 aaPredicted RBP9.25□□□□□ -0.93
SMC4-219ENST00000487747 LPIN3Q9BQK8 851 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
SMC4-219ENST00000487747 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.24□□□□□ -0.93
SMC4-219ENST00000487747 RSPO4Q2I0M5 234 aaPredicted RBP9.24□□□□□ -0.93
SMC4-219ENST00000487747 TMEM164Q5U3C3 297 aa9.24□□□□□ -0.93
SMC4-219ENST00000487747 HFE2Q6ZVN8 426 aa9.24□□□□□ -0.93
SMC4-219ENST00000487747 CMTR1Q8N1G2 835 aaKnown RBP9.24□□□□□ -0.93
SMC4-219ENST00000487747 TRPM4Q8TD43 1214 aa9.24□□□□□ -0.93
SMC4-219ENST00000487747 MKNK1Q9BUB5 465 aa9.24□□□□□ -0.93
SMC4-219ENST00000487747 ZMYND15Q9H091 742 aa9.23□□□□□ -0.93
SMC4-219ENST00000487747 SLAIN2Q9P270 581 aa9.23□□□□□ -0.93
SMC4-219ENST00000487747 KCNMB2Q9Y691 235 aa9.23□□□□□ -0.93
SMC4-219ENST00000487747 XYLBO75191 536 aa9.22□□□□□ -0.93
SMC4-219ENST00000487747 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
SMC4-219ENST00000487747 NKAPLQ5M9Q1 402 aa9.22□□□□□ -0.93
SMC4-219ENST00000487747 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
SMC4-219ENST00000487747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.22□□□□□ -0.932e-129■■■■■ 884.5
SMC4-219ENST00000487747 ATG7O95352 703 aa9.21□□□□□ -0.94
SMC4-219ENST00000487747 EGFRP00533 1210 aa9.21□□□□□ -0.94
SMC4-219ENST00000487747 ELNP15502 786 aa9.21□□□□□ -0.94
SMC4-219ENST00000487747 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
SMC4-219ENST00000487747 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.94
SMC4-219ENST00000487747 J3QW42 95 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 TNFRSF10BO14763 440 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 GPLD1P80108 840 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 MBTPS1Q14703 1052 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 TRIP4Q15650 581 aaPredicted RBP9.2□□□□□ -0.94
SMC4-219ENST00000487747 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
SMC4-219ENST00000487747 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 NACC1Q96RE7 527 aa9.2□□□□□ -0.94
SMC4-219ENST00000487747 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
SMC4-219ENST00000487747 MMP20O60882 483 aa9.19□□□□□ -0.94
SMC4-219ENST00000487747 ADGRE1Q14246 886 aa9.19□□□□□ -0.94
SMC4-219ENST00000487747 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
SMC4-219ENST00000487747 ELMSAN1Q6PJG2 1045 aa9.19□□□□□ -0.94
SMC4-219ENST00000487747 SMG9Q9H0W8 520 aaKnown RBP9.19□□□□□ -0.94
SMC4-219ENST00000487747 TLR7Q9NYK1 1049 aaKnown RBP9.19□□□□□ -0.94
SMC4-219ENST00000487747 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
SMC4-219ENST00000487747 RAC1P63000 192 aa9.18□□□□□ -0.94
SMC4-219ENST00000487747 PCSK7Q16549 785 aa9.18□□□□□ -0.94
SMC4-219ENST00000487747 Q8N3U1 123 aa9.18□□□□□ -0.94
SMC4-219ENST00000487747 LENG1Q96BZ8 264 aaPredicted RBP9.18□□□□□ -0.94
SMC4-219ENST00000487747 FRRS1LQ9P0K9 344 aa9.18□□□□□ -0.94
SMC4-219ENST00000487747 C9orf172C9J069 976 aa9.17□□□□□ -0.94
SMC4-219ENST00000487747 ZBTB39O15060 712 aa9.17□□□□□ -0.94
SMC4-219ENST00000487747 NRLP54845 237 aa9.17□□□□□ -0.94
SMC4-219ENST00000487747 NSUN5Q96P11 429 aaKnown RBP9.17□□□□□ -0.94
SMC4-219ENST00000487747 DYRK3O43781 588 aa9.16□□□□□ -0.94
SMC4-219ENST00000487747 EIF2AK2P19525 551 aaKnown RBP9.16□□□□□ -0.94
SMC4-219ENST00000487747 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
SMC4-219ENST00000487747 FOXD4L6Q3SYB3 417 aaPredicted RBP9.16□□□□□ -0.94
SMC4-219ENST00000487747 FOXD4L3Q6VB84 417 aaPredicted RBP9.16□□□□□ -0.94
SMC4-219ENST00000487747 COL26A1Q96A83 441 aa9.16□□□□□ -0.94
SMC4-219ENST00000487747 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
SMC4-219ENST00000487747 TTC9Q92623 222 aa9.15□□□□□ -0.94
SMC4-219ENST00000487747 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.94
SMC4-219ENST00000487747 LOC102724428A0A0B4J2F2 783 aa9.14□□□□□ -0.95
SMC4-219ENST00000487747 SIK1P57059 783 aa9.14□□□□□ -0.95
SMC4-219ENST00000487747 TXNRD3Q86VQ6 643 aa9.14□□□□□ -0.95
SMC4-219ENST00000487747 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
SMC4-219ENST00000487747 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
SMC4-219ENST00000487747 USP21Q9UK80 565 aa9.14□□□□□ -0.95
SMC4-219ENST00000487747 PSAPP07602 524 aa9.13□□□□□ -0.95
SMC4-219ENST00000487747 SCNN1AP37088 669 aa9.13□□□□□ -0.95
SMC4-219ENST00000487747 FBXO11Q86XK2 927 aa9.13□□□□□ -0.95
SMC4-219ENST00000487747 PLD4Q96BZ4 506 aa9.13□□□□□ -0.95
SMC4-219ENST00000487747 SEPT3Q9UH03 358 aa9.13□□□□□ -0.95
SMC4-219ENST00000487747 NRG1Q02297 640 aaPredicted RBP9.12□□□□□ -0.95
SMC4-219ENST00000487747 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
SMC4-219ENST00000487747 GDF6Q6KF10 455 aaPredicted RBP9.12□□□□□ -0.95
SMC4-219ENST00000487747 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
SMC4-219ENST00000487747 CCDC97Q96F63 343 aaPredicted RBP9.12□□□□□ -0.95
SMC4-219ENST00000487747 UBAP1LF5GYI3 381 aa9.11□□□□□ -0.95
SMC4-219ENST00000487747 ZAP70P43403 619 aa9.11□□□□□ -0.95
SMC4-219ENST00000487747 DTWD1Q8N5C7 304 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms