RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 GRAPQ13588 217 aa24.49■■□□□ 1.51
GMDS-205ENST00000486793 CST9Q5W186 159 aa24.49■■□□□ 1.51
GMDS-205ENST00000486793 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
GMDS-205ENST00000486793 GMPSP49915 693 aaPredicted RBP24.48■■□□□ 1.51
GMDS-205ENST00000486793 KIAA2012Q0VF49 1180 aa24.48■■□□□ 1.51
GMDS-205ENST00000486793 ADAMTS8Q9UP79 889 aa24.48■■□□□ 1.51
GMDS-205ENST00000486793 LBX1P52954 281 aa24.47■■□□□ 1.51
GMDS-205ENST00000486793 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
GMDS-205ENST00000486793 HDGFL1Q5TGJ6 251 aa24.47■■□□□ 1.51
GMDS-205ENST00000486793 ANKRD13DQ6ZTN6 518 aa24.47■■□□□ 1.51
GMDS-205ENST00000486793 PLBD2Q8NHP8 589 aa24.47■■□□□ 1.51
GMDS-205ENST00000486793 LTBP1Q14766 1721 aa24.47■■□□□ 1.51
GMDS-205ENST00000486793 RAD17O75943 681 aa24.46■■□□□ 1.51
GMDS-205ENST00000486793 CIAPIN1Q6FI81 312 aa24.46■■□□□ 1.51
GMDS-205ENST00000486793 MAP2K1Q02750 393 aaPredicted RBP24.45■■□□□ 1.5
GMDS-205ENST00000486793 FAM89AQ96GI7 184 aa24.45■■□□□ 1.5
GMDS-205ENST00000486793 ISCA1Q9BUE6 129 aa24.45■■□□□ 1.5
GMDS-205ENST00000486793 DBF4Q9UBU7 674 aaPredicted RBP24.45■■□□□ 1.5
GMDS-205ENST00000486793 ATP5J2-PTCD1G3V325 749 aa24.44■■□□□ 1.5
GMDS-205ENST00000486793 HOXB7P09629 217 aa24.44■■□□□ 1.5
GMDS-205ENST00000486793 PAXIP1Q6ZW49 1069 aaPredicted RBP24.44■■□□□ 1.5
GMDS-205ENST00000486793 CAPNS2Q96L46 248 aa24.44■■□□□ 1.5
GMDS-205ENST00000486793 TNIP1Q15025 636 aa24.43■■□□□ 1.5
GMDS-205ENST00000486793 CYP4F22Q6NT55 531 aa24.43■■□□□ 1.5
GMDS-205ENST00000486793 TMC4Q7Z404 712 aa24.43■■□□□ 1.5
GMDS-205ENST00000486793 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
GMDS-205ENST00000486793 HSPA8P11142 646 aaKnown RBP24.42■■□□□ 1.5
GMDS-205ENST00000486793 GRM1Q13255 1194 aa24.42■■□□□ 1.5
GMDS-205ENST00000486793 DUSP27Q5VZP5 1158 aa24.42■■□□□ 1.5
GMDS-205ENST00000486793 CFAP44Q96MT7 982 aa24.42■■□□□ 1.5
GMDS-205ENST00000486793 GPR101Q96P66 508 aaPredicted RBP24.42■■□□□ 1.5
GMDS-205ENST00000486793 PGAP2Q9UHJ9 254 aa24.42■■□□□ 1.5
GMDS-205ENST00000486793 YDJCA8MPS7 323 aa24.41■■□□□ 1.5
GMDS-205ENST00000486793 HIRAP54198 1017 aaPredicted RBP24.41■■□□□ 1.5
GMDS-205ENST00000486793 SF3B3Q15393 1217 aaKnown RBP24.41■■□□□ 1.5
GMDS-205ENST00000486793 CELF1Q92879 486 aaKnown RBP24.41■■□□□ 1.5
GMDS-205ENST00000486793 HYPKQ9NX55 129 aa24.41■■□□□ 1.5
GMDS-205ENST00000486793 TLL2Q9Y6L7 1015 aa24.41■■□□□ 1.5
GMDS-205ENST00000486793 ECE1P42892 770 aa24.4■■□□□ 1.5
GMDS-205ENST00000486793 RTL5Q5HYW3 569 aaPredicted RBP24.4■■□□□ 1.5
GMDS-205ENST00000486793 GLIS2Q9BZE0 524 aaPredicted RBP24.4■■□□□ 1.5
GMDS-205ENST00000486793 CNOT7Q9UIV1 285 aaKnown RBP24.4■■□□□ 1.5
GMDS-205ENST00000486793 NSFL1CQ9UNZ2 370 aaKnown RBP24.4■■□□□ 1.5
GMDS-205ENST00000486793 ZC3H15Q8WU90 426 aaKnown RBP24.39■■□□□ 1.49
GMDS-205ENST00000486793 MBIPQ9NS73 344 aa24.39■■□□□ 1.49
GMDS-205ENST00000486793 CDHR2Q9BYE9 1310 aa24.38■■□□□ 1.49
GMDS-205ENST00000486793 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
GMDS-205ENST00000486793 TRIM28Q13263 835 aaKnown RBP24.38■■□□□ 1.49
GMDS-205ENST00000486793 WASHC4Q2M389 1173 aa24.38■■□□□ 1.49
GMDS-205ENST00000486793 TRPM4Q8TD43 1214 aa24.38■■□□□ 1.49
GMDS-205ENST00000486793 SHTN1A0MZ66 631 aa24.37■■□□□ 1.49
GMDS-205ENST00000486793 RIMBP2O15034 1052 aa24.37■■□□□ 1.49
GMDS-205ENST00000486793 SAPCD2Q86UD0 394 aa24.37■■□□□ 1.49
GMDS-205ENST00000486793 ZBTB12Q9Y330 459 aaPredicted RBP24.37■■□□□ 1.49
GMDS-205ENST00000486793 C6orf229H3BNL8 230 aa24.36■■□□□ 1.49
GMDS-205ENST00000486793 H7C1D1 291 aa24.36■■□□□ 1.49
GMDS-205ENST00000486793 IRS4O14654 1257 aaPredicted RBP24.36■■□□□ 1.49
GMDS-205ENST00000486793 ZNF853P0CG23 659 aa24.36■■□□□ 1.49
GMDS-205ENST00000486793 GPSM2P81274 684 aa24.36■■□□□ 1.49
GMDS-205ENST00000486793 POLLQ9UGP5 575 aa24.36■■□□□ 1.49
GMDS-205ENST00000486793 AOC2O75106 756 aa24.35■■□□□ 1.49
GMDS-205ENST00000486793 CDC37L1Q7L3B6 337 aa24.35■■□□□ 1.49
GMDS-205ENST00000486793 RIC3Q7Z5B4 369 aa24.35■■□□□ 1.49
GMDS-205ENST00000486793 MICALL2Q8IY33 904 aa24.35■■□□□ 1.49
GMDS-205ENST00000486793 BEGAINQ9BUH8 593 aa24.35■■□□□ 1.49
GMDS-205ENST00000486793 DBNDD1Q9H9R9 158 aa24.35■■□□□ 1.49
GMDS-205ENST00000486793 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
GMDS-205ENST00000486793 PSMD14O00487 310 aa24.34■■□□□ 1.49
GMDS-205ENST00000486793 MAP2K2P36507 400 aa24.34■■□□□ 1.49
GMDS-205ENST00000486793 RPS8P62241 208 aaKnown RBP24.34■■□□□ 1.49
GMDS-205ENST00000486793 DPF2Q92785 391 aa24.34■■□□□ 1.49
GMDS-205ENST00000486793 PHAXQ9H814 394 aaKnown RBP24.34■■□□□ 1.49
GMDS-205ENST00000486793 ZNF408Q9H9D4 720 aa24.34■■□□□ 1.49
GMDS-205ENST00000486793 APAF1O14727 1248 aa24.33■■□□□ 1.49
GMDS-205ENST00000486793 USP48Q86UV5 1035 aa24.33■■□□□ 1.49
GMDS-205ENST00000486793 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
GMDS-205ENST00000486793 KCNQ5Q9NR82 932 aa24.33■■□□□ 1.49
GMDS-205ENST00000486793 DOK7Q18PE1 504 aa24.32■■□□□ 1.48
GMDS-205ENST00000486793 SAMD7Q7Z3H4 446 aa24.32■■□□□ 1.48
GMDS-205ENST00000486793 GOLGA2Q08379 1002 aa24.31■■□□□ 1.48
GMDS-205ENST00000486793 DLK2Q6UY11 383 aa24.31■■□□□ 1.48
GMDS-205ENST00000486793 ZBTB38Q8NAP3 1195 aaPredicted RBP24.31■■□□□ 1.48
GMDS-205ENST00000486793 TBC1D16Q8TBP0 767 aa24.31■■□□□ 1.48
GMDS-205ENST00000486793 IFT57Q9NWB7 429 aa24.31■■□□□ 1.48
GMDS-205ENST00000486793 GNAI1P63096 354 aa24.3■■□□□ 1.48
GMDS-205ENST00000486793 ABHD8Q96I13 439 aa24.3■■□□□ 1.48
GMDS-205ENST00000486793 HHIPL1Q96JK4 782 aa24.3■■□□□ 1.48
GMDS-205ENST00000486793 EYA3Q99504 573 aa24.3■■□□□ 1.48
GMDS-205ENST00000486793 SEC31BQ9NQW1 1179 aa24.3■■□□□ 1.48
GMDS-205ENST00000486793 DUOX1Q9NRD9 1551 aa24.29■■□□□ 1.48
GMDS-205ENST00000486793 ECE2O60344 883 aa24.29■■□□□ 1.48
GMDS-205ENST00000486793 TBC1D10BQ4KMP7 808 aaPredicted RBP24.29■■□□□ 1.48
GMDS-205ENST00000486793 MYD88Q99836 296 aa24.29■■□□□ 1.48
GMDS-205ENST00000486793 TSKSQ9UJT2 592 aa24.29■■□□□ 1.48
GMDS-205ENST00000486793 EGFRP00533 1210 aa24.28■■□□□ 1.48
GMDS-205ENST00000486793 RBM26Q5T8P6 1007 aaKnown RBP24.28■■□□□ 1.48
GMDS-205ENST00000486793 C8orf58Q8NAV2 365 aa24.28■■□□□ 1.48
GMDS-205ENST00000486793 ZC3H12CQ9C0D7 883 aaKnown RBP24.28■■□□□ 1.48
GMDS-205ENST00000486793 ANKRD36CQ5JPF3 1778 aa24.27■■□□□ 1.48
GMDS-205ENST00000486793 RPS12P25398 132 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms