RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 RARAP10276 462 aa10.33□□□□□ -0.76
RTN4-214ENST00000486085 MAPK8P45983 427 aa10.33□□□□□ -0.76
RTN4-214ENST00000486085 DSC3Q14574 896 aa10.33□□□□□ -0.76
RTN4-214ENST00000486085 TTC39BQ5VTQ0 682 aaPredicted RBP10.33□□□□□ -0.76
RTN4-214ENST00000486085 ZFATQ9P243 1243 aa10.33□□□□□ -0.76
RTN4-214ENST00000486085 FOXD3Q9UJU5 478 aaPredicted RBP10.33□□□□□ -0.76
RTN4-214ENST00000486085 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
RTN4-214ENST00000486085 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
RTN4-214ENST00000486085 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
RTN4-214ENST00000486085 ORC1Q13415 861 aa10.32□□□□□ -0.76
RTN4-214ENST00000486085 IRF7Q92985 503 aa10.32□□□□□ -0.76
RTN4-214ENST00000486085 ALKBH8Q96BT7 664 aaKnown RBP10.32□□□□□ -0.76
RTN4-214ENST00000486085 ABI2Q9NYB9 513 aaPredicted RBP10.32□□□□□ -0.76
RTN4-214ENST00000486085 NEFLP07196 543 aa10.31□□□□□ -0.76
RTN4-214ENST00000486085 P4HBP07237 508 aaKnown RBP10.31□□□□□ -0.76
RTN4-214ENST00000486085 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
RTN4-214ENST00000486085 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
RTN4-214ENST00000486085 MBIPQ9NS73 344 aa10.31□□□□□ -0.76
RTN4-214ENST00000486085 CNTN3Q9P232 1028 aa10.31□□□□□ -0.76
RTN4-214ENST00000486085 MMP20O60882 483 aa10.3□□□□□ -0.76
RTN4-214ENST00000486085 PHACTR2O75167 634 aa10.3□□□□□ -0.76
RTN4-214ENST00000486085 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.765e-11■□□□□ 8.4
RTN4-214ENST00000486085 EAPPQ56P03 285 aaPredicted RBP10.3□□□□□ -0.76
RTN4-214ENST00000486085 SYT9Q86SS6 491 aa10.3□□□□□ -0.76
RTN4-214ENST00000486085 C1orf127Q8N9H9 656 aa10.3□□□□□ -0.76
RTN4-214ENST00000486085 EFCC1Q9HA90 598 aa10.3□□□□□ -0.76
RTN4-214ENST00000486085 PCBP4P57723 403 aaKnown RBP10.29□□□□□ -0.76
RTN4-214ENST00000486085 SNX29Q8TEQ0 813 aa10.29□□□□□ -0.76
RTN4-214ENST00000486085 CSRNP1Q96S65 589 aa10.29□□□□□ -0.76
RTN4-214ENST00000486085 BCL2L13Q9BXK5 485 aa10.29□□□□□ -0.76
RTN4-214ENST00000486085 IGFLR1Q9H665 355 aa10.29□□□□□ -0.76
RTN4-214ENST00000486085 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
RTN4-214ENST00000486085 EIF1AYO14602 144 aaKnown RBP10.28□□□□□ -0.76
RTN4-214ENST00000486085 COL19A1Q14993 1142 aa10.28□□□□□ -0.76
RTN4-214ENST00000486085 ZFYVE28Q9HCC9 887 aa10.28□□□□□ -0.76
RTN4-214ENST00000486085 IGF1RP08069 1367 aa10.27□□□□□ -0.76
RTN4-214ENST00000486085 PNMA6FA0A0J9YX94 578 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 CPNE3O75131 537 aaKnown RBP10.27□□□□□ -0.77
RTN4-214ENST00000486085 MAP3K6O95382 1288 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 CYP2E1P05181 493 aaPredicted RBP10.27□□□□□ -0.77
RTN4-214ENST00000486085 PSAPP07602 524 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 MAP2K3P46734 347 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 TBC1D8BQ0IIM8 1120 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 ZNF468Q5VIY5 522 aaPredicted RBP10.27□□□□□ -0.77
RTN4-214ENST00000486085 USPL1Q5W0Q7 1092 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 DHX32Q7L7V1 743 aaKnown RBP10.27□□□□□ -0.77
RTN4-214ENST00000486085 CNTNAP3BQ96NU0 1288 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 CNTNAP3Q9BZ76 1288 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 TLR7Q9NYK1 1049 aaKnown RBP10.27□□□□□ -0.77
RTN4-214ENST00000486085 WWC3Q9ULE0 1092 aa10.27□□□□□ -0.77
RTN4-214ENST00000486085 CES1P23141 567 aa10.26□□□□□ -0.77
RTN4-214ENST00000486085 KRT76Q01546 638 aa10.26□□□□□ -0.77
RTN4-214ENST00000486085 TAGLNQ01995 201 aaKnown RBP10.26□□□□□ -0.77
RTN4-214ENST00000486085 ENOX2Q16206 610 aaKnown RBP10.26□□□□□ -0.77
RTN4-214ENST00000486085 OR13H1Q8NG92 308 aa10.26□□□□□ -0.77
RTN4-214ENST00000486085 GIPC2Q8TF65 315 aa10.26□□□□□ -0.77
RTN4-214ENST00000486085 ZNF775Q96BV0 537 aaPredicted RBP10.26□□□□□ -0.77
RTN4-214ENST00000486085 SETDB2Q96T68 719 aa10.26□□□□□ -0.77
RTN4-214ENST00000486085 CHRDQ9H2X0 955 aa10.26□□□□□ -0.77
RTN4-214ENST00000486085 EREGO14944 169 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 WFS1O76024 890 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
RTN4-214ENST00000486085 LDHBP07195 334 aaKnown RBP10.25□□□□□ -0.77
RTN4-214ENST00000486085 FBXO33Q7Z6M2 555 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 PMEPA1Q969W9 287 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 KANSL3Q9P2N6 904 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 KLF15Q9UIH9 416 aa10.25□□□□□ -0.77
RTN4-214ENST00000486085 PHF20L1A8MW92 1017 aa10.24□□□□□ -0.77
RTN4-214ENST00000486085 SIN3BO75182 1162 aa10.24□□□□□ -0.77
RTN4-214ENST00000486085 ARAFP10398 606 aa10.24□□□□□ -0.77
RTN4-214ENST00000486085 UBE2OQ9C0C9 1292 aaKnown RBP10.24□□□□□ -0.77
RTN4-214ENST00000486085 AVENQ9NQS1 362 aaPredicted RBP10.24□□□□□ -0.77
RTN4-214ENST00000486085 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
RTN4-214ENST00000486085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.24□□□□□ -0.77
RTN4-214ENST00000486085 NEURL1BA8MQ27 555 aa10.23□□□□□ -0.77
RTN4-214ENST00000486085 GMPRP36959 345 aa10.23□□□□□ -0.77
RTN4-214ENST00000486085 ATP2B2Q01814 1243 aa10.23□□□□□ -0.77
RTN4-214ENST00000486085 MLLT1Q03111 559 aaPredicted RBP10.23□□□□□ -0.77
RTN4-214ENST00000486085 PLAURQ03405 335 aa10.23□□□□□ -0.77
RTN4-214ENST00000486085 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
RTN4-214ENST00000486085 DNAJB12Q9NXW2 375 aaKnown RBP10.23□□□□□ -0.77
RTN4-214ENST00000486085 ZBTB42B2RXF5 422 aa10.22□□□□□ -0.77
RTN4-214ENST00000486085 ADH6P28332 368 aa10.22□□□□□ -0.77
RTN4-214ENST00000486085 SRSF11Q05519 484 aaKnown RBP10.22□□□□□ -0.77
RTN4-214ENST00000486085 COL13A1Q5TAT6 717 aaPredicted RBP10.22□□□□□ -0.77
RTN4-214ENST00000486085 HFE2Q6ZVN8 426 aa10.22□□□□□ -0.77
RTN4-214ENST00000486085 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
RTN4-214ENST00000486085 NSUN5Q96P11 429 aaKnown RBP10.22□□□□□ -0.77
RTN4-214ENST00000486085 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
RTN4-214ENST00000486085 RBM47A0AV96 593 aaKnown RBP10.21□□□□□ -0.77
RTN4-214ENST00000486085 ADAMTS2O95450 1211 aa10.21□□□□□ -0.77
RTN4-214ENST00000486085 ZNF16P17020 682 aaPredicted RBP10.21□□□□□ -0.77
RTN4-214ENST00000486085 HYAL2Q12891 473 aa10.21□□□□□ -0.77
RTN4-214ENST00000486085 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.77
RTN4-214ENST00000486085 ALG1LQ6GMV1 187 aa10.21□□□□□ -0.77
RTN4-214ENST00000486085 CCDC74AQ96AQ1 378 aa10.21□□□□□ -0.77
RTN4-214ENST00000486085 SOX18P35713 384 aa10.2□□□□□ -0.78
RTN4-214ENST00000486085 NRLP54845 237 aa10.2□□□□□ -0.78
RTN4-214ENST00000486085 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms