RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 TNS4Q8IZW8 715 aa17.78■□□□□ 0.44
SCAF4-206ENST00000485790 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.44
SCAF4-206ENST00000485790 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.44
SCAF4-206ENST00000485790 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
SCAF4-206ENST00000485790 CIAPIN1Q6FI81 312 aa17.77■□□□□ 0.44
SCAF4-206ENST00000485790 AIDAQ96BJ3 306 aa17.77■□□□□ 0.44
SCAF4-206ENST00000485790 BCL2L13Q9BXK5 485 aa17.77■□□□□ 0.44
SCAF4-206ENST00000485790 ADARB2Q9NS39 739 aaKnown RBP17.77■□□□□ 0.44
SCAF4-206ENST00000485790 NSFL1CQ9UNZ2 370 aaKnown RBP17.77■□□□□ 0.44
SCAF4-206ENST00000485790 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
SCAF4-206ENST00000485790 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
SCAF4-206ENST00000485790 IRS4O14654 1257 aaPredicted RBP17.76■□□□□ 0.43
SCAF4-206ENST00000485790 SCNN1DP51172 638 aa17.76■□□□□ 0.43
SCAF4-206ENST00000485790 WASHC4Q2M389 1173 aa17.76■□□□□ 0.43
SCAF4-206ENST00000485790 GPRC5DQ9NZD1 345 aa17.76■□□□□ 0.43
SCAF4-206ENST00000485790 ABT1Q9ULW3 272 aaKnown RBP17.76■□□□□ 0.43
SCAF4-206ENST00000485790 CNTNAP1P78357 1384 aa17.76■□□□□ 0.43
SCAF4-206ENST00000485790 SNED1Q8TER0 1413 aa17.75■□□□□ 0.43
SCAF4-206ENST00000485790 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
SCAF4-206ENST00000485790 VEGFBP49765 207 aa17.75■□□□□ 0.43
SCAF4-206ENST00000485790 RPS8P62241 208 aaKnown RBP17.75■□□□□ 0.43
SCAF4-206ENST00000485790 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
SCAF4-206ENST00000485790 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
SCAF4-206ENST00000485790 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
SCAF4-206ENST00000485790 C6orf229H3BNL8 230 aa17.74■□□□□ 0.43
SCAF4-206ENST00000485790 H7C1D1 291 aa17.74■□□□□ 0.43
SCAF4-206ENST00000485790 ZBTB38Q8NAP3 1195 aaPredicted RBP17.74■□□□□ 0.43
SCAF4-206ENST00000485790 EYA3Q99504 573 aa17.74■□□□□ 0.43
SCAF4-206ENST00000485790 DICER1Q9UPY3 1922 aaKnown RBP17.74■□□□□ 0.43
SCAF4-206ENST00000485790 RAD17O75943 681 aa17.73■□□□□ 0.43
SCAF4-206ENST00000485790 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
SCAF4-206ENST00000485790 GMPSP49915 693 aaPredicted RBP17.73■□□□□ 0.43
SCAF4-206ENST00000485790 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
SCAF4-206ENST00000485790 ZC3H15Q8WU90 426 aaKnown RBP17.73■□□□□ 0.43
SCAF4-206ENST00000485790 NUP98P52948 1817 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 ARFGEF2Q9Y6D5 1785 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 RASSF10A6NK89 507 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 G3V3G9 751 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 DCAF8Q5TAQ9 597 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 MYD88Q99836 296 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 ZC3H12CQ9C0D7 883 aaKnown RBP17.72■□□□□ 0.43
SCAF4-206ENST00000485790 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
SCAF4-206ENST00000485790 CDHR2Q9BYE9 1310 aa17.72■□□□□ 0.43
SCAF4-206ENST00000485790 ECE1P42892 770 aa17.71■□□□□ 0.43
SCAF4-206ENST00000485790 CTCFP49711 727 aaPredicted RBP17.71■□□□□ 0.43
SCAF4-206ENST00000485790 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
SCAF4-206ENST00000485790 CCDC152Q4G0S7 254 aa17.71■□□□□ 0.43
SCAF4-206ENST00000485790 CELF1Q92879 486 aaKnown RBP17.71■□□□□ 0.43
SCAF4-206ENST00000485790 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
SCAF4-206ENST00000485790 CNOT7Q9UIV1 285 aaKnown RBP17.71■□□□□ 0.43
SCAF4-206ENST00000485790 SCN4AP35499 1836 aa17.7■□□□□ 0.42
SCAF4-206ENST00000485790 PCNTO95613 3336 aa17.7■□□□□ 0.42
SCAF4-206ENST00000485790 RIMBP2O15034 1052 aa17.7■□□□□ 0.42
SCAF4-206ENST00000485790 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
SCAF4-206ENST00000485790 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
SCAF4-206ENST00000485790 ANKIB1Q9P2G1 1089 aa17.7■□□□□ 0.42
SCAF4-206ENST00000485790 PDE8AO60658 829 aa17.69■□□□□ 0.42
SCAF4-206ENST00000485790 PCCAP05165 728 aaPredicted RBP17.69■□□□□ 0.42
SCAF4-206ENST00000485790 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
SCAF4-206ENST00000485790 PAXIP1Q6ZW49 1069 aaPredicted RBP17.69■□□□□ 0.42
SCAF4-206ENST00000485790 CDC37L1Q7L3B6 337 aa17.69■□□□□ 0.42
SCAF4-206ENST00000485790 DPF2Q92785 391 aa17.69■□□□□ 0.42
SCAF4-206ENST00000485790 BEGAINQ9BUH8 593 aa17.69■□□□□ 0.42
SCAF4-206ENST00000485790 PGAP2Q9UHJ9 254 aa17.69■□□□□ 0.42
SCAF4-206ENST00000485790 WDR33Q9C0J8 1336 aaKnown RBP17.69■□□□□ 0.42
SCAF4-206ENST00000485790 GPSM2P81274 684 aa17.68■□□□□ 0.42
SCAF4-206ENST00000485790 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
SCAF4-206ENST00000485790 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
SCAF4-206ENST00000485790 PRDM10Q9NQV6 1147 aa17.68■□□□□ 0.42
SCAF4-206ENST00000485790 WBP1LQ9NX94 342 aa17.68■□□□□ 0.42
SCAF4-206ENST00000485790 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
SCAF4-206ENST00000485790 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
SCAF4-206ENST00000485790 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
SCAF4-206ENST00000485790 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
SCAF4-206ENST00000485790 MAP3K2Q9Y2U5 619 aa17.67■□□□□ 0.42
SCAF4-206ENST00000485790 TRAF5O00463 557 aa17.66■□□□□ 0.42
SCAF4-206ENST00000485790 FOXN1O15353 648 aa17.66■□□□□ 0.42
SCAF4-206ENST00000485790 CAPN15O75808 1086 aa17.66■□□□□ 0.42
SCAF4-206ENST00000485790 CST9Q5W186 159 aa17.66■□□□□ 0.42
SCAF4-206ENST00000485790 GPR101Q96P66 508 aaPredicted RBP17.66■□□□□ 0.42
SCAF4-206ENST00000485790 DBNDD1Q9H9R9 158 aa17.66■□□□□ 0.42
SCAF4-206ENST00000485790 PODXL2Q9NZ53 605 aa17.66■□□□□ 0.42
SCAF4-206ENST00000485790 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 YDJCA8MPS7 323 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 ANP32CO43423 234 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
SCAF4-206ENST00000485790 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 DOK7Q18PE1 504 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 WWC1Q8IX03 1113 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 MICALL2Q8IY33 904 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 CAPNS2Q96L46 248 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
SCAF4-206ENST00000485790 PSMD14O00487 310 aa17.64■□□□□ 0.41
SCAF4-206ENST00000485790 GRM1Q13255 1194 aa17.64■□□□□ 0.41
SCAF4-206ENST00000485790 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 977 ms