RNA–Protein interactions for RNA: ENST00000484793.5

MACF1-219, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-219	ENST00000484793	HSP90B1	P14625	803 aa	Known RBP	33.21	■■■□□ 2.91
MACF1-219	ENST00000484793	EAPP	Q56P03	285 aa	Predicted RBP	33.21	■■■□□ 2.91
MACF1-219	ENST00000484793	IFFO2	Q5TF58	517 aa		33.21	■■■□□ 2.91
MACF1-219	ENST00000484793	ELL2	O00472	640 aa	Predicted RBP	33.2	■■■□□ 2.91
MACF1-219	ENST00000484793	LMOD1	P29536	600 aa	Predicted RBP	33.2	■■■□□ 2.91
MACF1-219	ENST00000484793	KIAA2012	Q0VF49	1180 aa		33.2	■■■□□ 2.91
MACF1-219	ENST00000484793	AOC3	Q16853	763 aa		33.2	■■■□□ 2.91
MACF1-219	ENST00000484793	PHAX	Q9H814	394 aa	Known RBP	33.2	■■■□□ 2.91
MACF1-219	ENST00000484793	GJA3	Q9Y6H8	435 aa		33.2	■■■□□ 2.91
MACF1-219	ENST00000484793	ITGBL1	O95965	494 aa	Predicted RBP	33.19	■■■□□ 2.9
MACF1-219	ENST00000484793	SCNN1D	P51172	638 aa		33.19	■■■□□ 2.9
MACF1-219	ENST00000484793	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.19	■■■□□ 2.9
MACF1-219	ENST00000484793	ZNRF3	Q9ULT6	936 aa		33.19	■■■□□ 2.9
MACF1-219	ENST00000484793	IL16	Q14005	1332 aa		33.19	■■■□□ 2.9
MACF1-219	ENST00000484793	DDX58	O95786	925 aa	Known RBP	33.18	■■■□□ 2.9
MACF1-219	ENST00000484793	LTBP1	Q14766	1721 aa		33.18	■■■□□ 2.9
MACF1-219	ENST00000484793	DUOX1	Q9NRD9	1551 aa		33.17	■■■□□ 2.9
MACF1-219	ENST00000484793	IRS4	O14654	1257 aa	Predicted RBP	33.17	■■■□□ 2.9
MACF1-219	ENST00000484793	WWC1	Q8IX03	1113 aa		33.17	■■■□□ 2.9
MACF1-219	ENST00000484793	CCDC191	Q8NCU4	936 aa		33.17	■■■□□ 2.9
MACF1-219	ENST00000484793	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.16	■■■□□ 2.9
MACF1-219	ENST00000484793	CDHR2	Q9BYE9	1310 aa		33.15	■■■□□ 2.9
MACF1-219	ENST00000484793	CLEC11A	Q9Y240	323 aa		33.15	■■■□□ 2.9
MACF1-219	ENST00000484793	ANP32C	O43423	234 aa		33.14	■■■□□ 2.9
MACF1-219	ENST00000484793	MRS2	Q9HD23	443 aa		33.14	■■■□□ 2.9
MACF1-219	ENST00000484793	USP50	Q70EL3	339 aa	Predicted RBP	33.13	■■■□□ 2.89
MACF1-219	ENST00000484793	TSPYL6	Q8N831	410 aa		33.13	■■■□□ 2.89
MACF1-219	ENST00000484793	MYD88	Q99836	296 aa		33.13	■■■□□ 2.89
MACF1-219	ENST00000484793	METTL22	Q9BUU2	404 aa	Predicted RBP	33.13	■■■□□ 2.89
MACF1-219	ENST00000484793	PCCA	P05165	728 aa	Predicted RBP	33.12	■■■□□ 2.89
MACF1-219	ENST00000484793	CXCL9	Q07325	125 aa		33.12	■■■□□ 2.89
MACF1-219	ENST00000484793	CELF1	Q92879	486 aa	Known RBP	33.12	■■■□□ 2.89
MACF1-219	ENST00000484793	TAF1	P21675	1872 aa		33.12	■■■□□ 2.89
MACF1-219	ENST00000484793	CNTNAP1	P78357	1384 aa		33.11	■■■□□ 2.89
MACF1-219	ENST00000484793	TMEM88B	A6NKF7	163 aa		33.11	■■■□□ 2.89
MACF1-219	ENST00000484793	CNTROB	Q8N137	903 aa		33.11	■■■□□ 2.89
MACF1-219	ENST00000484793	TSR2	Q969E8	191 aa	Known RBP	33.11	■■■□□ 2.89
MACF1-219	ENST00000484793	CWC25	Q9NXE8	425 aa	Predicted RBP	33.11	■■■□□ 2.89
MACF1-219	ENST00000484793	PCNT	O95613	3336 aa		33.1	■■■□□ 2.89
MACF1-219	ENST00000484793	EPS15	P42566	896 aa		33.1	■■■□□ 2.89
MACF1-219	ENST00000484793	ZNF428	Q96B54	188 aa		33.1	■■■□□ 2.89
MACF1-219	ENST00000484793	STK31	Q9BXU1	1019 aa		33.1	■■■□□ 2.89
MACF1-219	ENST00000484793	GPRC5D	Q9NZD1	345 aa		33.1	■■■□□ 2.89
MACF1-219	ENST00000484793	TNIP1	Q15025	636 aa		33.08	■■■□□ 2.89
MACF1-219	ENST00000484793	RTL5	Q5HYW3	569 aa	Predicted RBP	33.08	■■■□□ 2.89
MACF1-219	ENST00000484793	MAP1S	Q66K74	1059 aa	Predicted RBP	33.08	■■■□□ 2.89
MACF1-219	ENST00000484793	CIAPIN1	Q6FI81	312 aa		33.08	■■■□□ 2.89
MACF1-219	ENST00000484793	KSR2	Q6VAB6	950 aa		33.08	■■■□□ 2.89
MACF1-219	ENST00000484793	ADARB2	Q9NS39	739 aa	Known RBP	33.08	■■■□□ 2.89
MACF1-219	ENST00000484793	RPS8	P62241	208 aa	Known RBP	33.07	■■■□□ 2.88
MACF1-219	ENST00000484793	TWISTNB	Q3B726	338 aa	Predicted RBP	33.07	■■■□□ 2.88
MACF1-219	ENST00000484793	CCDC152	Q4G0S7	254 aa		33.06	■■■□□ 2.88
MACF1-219	ENST00000484793	MAP3K2	Q9Y2U5	619 aa		33.06	■■■□□ 2.88
MACF1-219	ENST00000484793	COL4A1	P02462	1669 aa		33.06	■■■□□ 2.88
MACF1-219	ENST00000484793	PDE8A	O60658	829 aa		33.05	■■■□□ 2.88
MACF1-219	ENST00000484793	MKRN1	Q9UHC7	482 aa	Known RBP	33.05	■■■□□ 2.88
MACF1-219	ENST00000484793	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.05	■■■□□ 2.88
MACF1-219	ENST00000484793	WASHC4	Q2M389	1173 aa		33.04	■■■□□ 2.88
MACF1-219	ENST00000484793	HSPA1A	P0DMV8	641 aa	Known RBP	33.03	■■■□□ 2.88
MACF1-219	ENST00000484793	HSPA1B	P0DMV9	641 aa	Known RBP	33.03	■■■□□ 2.88
MACF1-219	ENST00000484793	GMPS	P49915	693 aa	Predicted RBP	33.03	■■■□□ 2.88
MACF1-219	ENST00000484793	WDR63	Q8IWG1	891 aa		33.03	■■■□□ 2.88
MACF1-219	ENST00000484793	EYA3	Q99504	573 aa		33.03	■■■□□ 2.88
MACF1-219	ENST00000484793	PODXL2	Q9NZ53	605 aa		33.03	■■■□□ 2.88
MACF1-219	ENST00000484793	PI4KAP2	A4QPH2	592 aa		33.02	■■■□□ 2.88
MACF1-219	ENST00000484793	PI4KAP1	Q8N8J0	262 aa		33.02	■■■□□ 2.88
MACF1-219	ENST00000484793	YDJC	A8MPS7	323 aa		33.01	■■■□□ 2.87
MACF1-219	ENST00000484793	GPSM2	P81274	684 aa		33.01	■■■□□ 2.87
MACF1-219	ENST00000484793	NEXN	Q0ZGT2	675 aa		33.01	■■■□□ 2.87
MACF1-219	ENST00000484793	POLL	Q9UGP5	575 aa		33.01	■■■□□ 2.87
MACF1-219	ENST00000484793	FANCI	Q9NVI1	1328 aa		33.01	■■■□□ 2.87
MACF1-219	ENST00000484793	RASSF10	A6NK89	507 aa		33	■■■□□ 2.87
MACF1-219	ENST00000484793	IGKV5-2	P06315	115 aa		33	■■■□□ 2.87
MACF1-219	ENST00000484793	RAD17	O75943	681 aa		32.99	■■■□□ 2.87
MACF1-219	ENST00000484793	C6orf229	H3BNL8	230 aa		32.98	■■■□□ 2.87
MACF1-219	ENST00000484793	TBC1D16	Q8TBP0	767 aa		32.98	■■■□□ 2.87
MACF1-219	ENST00000484793	ZC3H15	Q8WU90	426 aa	Known RBP	32.98	■■■□□ 2.87
MACF1-219	ENST00000484793	BCL2L13	Q9BXK5	485 aa		32.98	■■■□□ 2.87
MACF1-219	ENST00000484793	SEC31B	Q9NQW1	1179 aa		32.98	■■■□□ 2.87
MACF1-219	ENST00000484793	DPF2	Q92785	391 aa		32.97	■■■□□ 2.87
MACF1-219	ENST00000484793	PGAP2	Q9UHJ9	254 aa		32.97	■■■□□ 2.87
MACF1-219	ENST00000484793	RTL9	Q8NET4	1388 aa		32.96	■■■□□ 2.87
MACF1-219	ENST00000484793	SLC4A2	P04920	1241 aa		32.96	■■■□□ 2.87
MACF1-219	ENST00000484793	CACNA1F	O60840	1977 aa		32.96	■■■□□ 2.87
MACF1-219	ENST00000484793	CTSW	P56202	376 aa		32.95	■■■□□ 2.87
MACF1-219	ENST00000484793	NEURL1B	A8MQ27	555 aa		32.94	■■■□□ 2.86
MACF1-219	ENST00000484793	RPS12	P25398	132 aa	Known RBP	32.94	■■■□□ 2.86
MACF1-219	ENST00000484793	DBNDD1	Q9H9R9	158 aa		32.94	■■■□□ 2.86
MACF1-219	ENST00000484793	VEGFB	P49765	207 aa		32.93	■■■□□ 2.86
MACF1-219	ENST00000484793	FLII	Q13045	1269 aa		32.93	■■■□□ 2.86
MACF1-219	ENST00000484793	G2E3	Q7L622	706 aa		32.93	■■■□□ 2.86
MACF1-219	ENST00000484793	ANKRD18A	Q8IVF6	992 aa		32.93	■■■□□ 2.86
MACF1-219	ENST00000484793	CDC5L	Q99459	802 aa	Known RBP	32.93	■■■□□ 2.86
MACF1-219	ENST00000484793	ECE2	O60344	883 aa		32.92	■■■□□ 2.86
MACF1-219	ENST00000484793	DEFB115	Q30KQ5	88 aa		32.92	■■■□□ 2.86
MACF1-219	ENST00000484793	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.92	■■■□□ 2.86
MACF1-219	ENST00000484793	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.92	■■■□□ 2.86
MACF1-219	ENST00000484793	CNOT7	Q9UIV1	285 aa	Known RBP	32.92	■■■□□ 2.86
MACF1-219	ENST00000484793	GGA1	Q9UJY5	639 aa		32.92	■■■□□ 2.86
MACF1-219	ENST00000484793	TRPM7	Q96QT4	1865 aa		32.91	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms