RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 CTSWP56202 376 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 RTL5Q5HYW3 569 aaPredicted RBP5.72□□□□□ -1.49
SHANK2-216ENST00000482659 INTS3Q68E01 1043 aaKnown RBP5.72□□□□□ -1.49
SHANK2-216ENST00000482659 PRPF40BQ6NWY9 871 aaKnown RBP5.72□□□□□ -1.49
SHANK2-216ENST00000482659 ARHGAP27Q6ZUM4 889 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 UBE3BQ7Z3V4 1068 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 FTSJ3Q8IY81 847 aaKnown RBP5.72□□□□□ -1.49
SHANK2-216ENST00000482659 CCDC24Q8N4L8 307 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 CDC5LQ99459 802 aaKnown RBP5.72□□□□□ -1.49
SHANK2-216ENST00000482659 PLA2G12BQ9BX93 195 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 VPS33BQ9H267 617 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 UTYO14607 1347 aa5.72□□□□□ -1.49
SHANK2-216ENST00000482659 ITGB4P16144 1822 aa5.71□□□□□ -1.49
SHANK2-216ENST00000482659 TJP1Q07157 1748 aa5.71□□□□□ -1.49
SHANK2-216ENST00000482659 UBR2Q8IWV8 1755 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 ANKRD18BA2A2Z9 1011 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 PPEF1O14829 653 aaPredicted RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 C21orf2O43822 256 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 CSF1RP07333 972 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 UBTFL1P0CB47 393 aaPredicted RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 TRIM27P14373 513 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 RPS8P62241 208 aaKnown RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 IFIT5Q13325 482 aaKnown RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 GRAPQ13588 217 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 CCDC57Q2TAC2 916 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 CCDC93Q567U6 631 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 ANKRD18AQ8IVF6 992 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 SP8Q8IXZ3 490 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 DZIP1LQ8IYY4 767 aaKnown RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 SUPT20HQ8NEM7 779 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 TTLL11Q8NHH1 800 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 GRAPLQ8TC17 118 aaPredicted RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 ATP6V0A2Q9Y487 856 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 FARP1Q9Y4F1 1045 aaPredicted RBP5.71□□□□□ -1.5
SHANK2-216ENST00000482659 PXDNLA1KZ92 1463 aa5.71□□□□□ -1.5
SHANK2-216ENST00000482659 LRP5O75197 1615 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 SIPA1L3O60292 1781 aaPredicted RBP5.7□□□□□ -1.5
SHANK2-216ENST00000482659 KDM3BQ7LBC6 1761 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 CASZ1Q86V15 1759 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 ABCC12Q96J65 1359 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 YBX3P16989 372 aaKnown RBP eCLIP5.7□□□□□ -1.5
SHANK2-216ENST00000482659 IGHMBP2P38935 993 aaKnown RBP5.7□□□□□ -1.5
SHANK2-216ENST00000482659 CASP7P55210 303 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 PDE3AQ14432 1141 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 TAF7LQ5H9L4 462 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 SYNE4Q8N205 404 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 MPHOSPH8Q99549 860 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 USP44Q9H0E7 712 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 TAOK3Q9H2K8 898 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 RTN4Q9NQC3 1192 aaKnown RBP5.7□□□□□ -1.5
SHANK2-216ENST00000482659 ABCC4O15439 1325 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 LTBP3Q9NS15 1303 aa5.7□□□□□ -1.5
SHANK2-216ENST00000482659 RTL9Q8NET4 1388 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 COL5A3P25940 1745 aaPredicted RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 GNAI2P04899 355 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 NBPF7P0C2Y1 421 aaPredicted RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 LMNB1P20700 586 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 ITGA6P23229 1130 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 NUBP1P53384 320 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 FOXO4P98177 505 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 FKBP4Q02790 459 aaKnown RBP eCLIP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 RABL6Q3YEC7 729 aaPredicted RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 LMBR1LQ6UX01 489 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 DPP8Q6V1X1 898 aaPredicted RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 ITPRIPQ8IWB1 547 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 MPNDQ8N594 471 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 JARID2Q92833 1246 aaPredicted RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 CLUAP1Q96AJ1 413 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 PSMD1Q99460 953 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 EYA3Q99504 573 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 ANKRD2Q9GZV1 360 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 BSDC1Q9NW68 430 aaPredicted RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 WWC3Q9ULE0 1092 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 CHMP3Q9Y3E7 222 aa5.69□□□□□ -1.5
SHANK2-216ENST00000482659 ZC3H4Q9UPT8 1303 aaKnown RBP5.69□□□□□ -1.5
SHANK2-216ENST00000482659 ATP2B4P23634 1241 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 DPY19L2Q6NUT2 758 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 LDHAL6AQ6ZMR3 332 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 C3orf67Q6ZVT6 689 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 TMEM57Q8N5G2 664 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 JDP2Q8WYK2 163 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 CELF1Q92879 486 aaKnown RBP5.68□□□□□ -1.5
SHANK2-216ENST00000482659 SUCLG2Q96I99 432 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 RTFDC1Q9BY42 306 aaPredicted RBP5.68□□□□□ -1.5
SHANK2-216ENST00000482659 ZC3H12CQ9C0D7 883 aaKnown RBP5.68□□□□□ -1.5
SHANK2-216ENST00000482659 GREM2Q9H772 168 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 PODXL2Q9NZ53 605 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 ANKIB1Q9P2G1 1089 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 DDX19BQ9UMR2 479 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 NSFL1CQ9UNZ2 370 aaKnown RBP5.68□□□□□ -1.5
SHANK2-216ENST00000482659 LEMD3Q9Y2U8 911 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 QSER1Q2KHR3 1735 aa5.68□□□□□ -1.5
SHANK2-216ENST00000482659 G3V3G9 751 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 ZBTB7BO15156 539 aaPredicted RBP5.67□□□□□ -1.5
SHANK2-216ENST00000482659 MTX1Q13505 466 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 AAMPQ13685 434 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 MVPQ14764 893 aaKnown RBP5.67□□□□□ -1.5
SHANK2-216ENST00000482659 WASHC4Q2M389 1173 aa5.67□□□□□ -1.5
SHANK2-216ENST00000482659 FAM161AQ3B820 660 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms