RNA–Protein interactions for RNA: ENST00000480358.6

SFXN2-203, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 2,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-203ENST00000480358 ST5P78524 1137 aa17.36■□□□□ 0.37
SFXN2-203ENST00000480358 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
SFXN2-203ENST00000480358 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
SFXN2-203ENST00000480358 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
SFXN2-203ENST00000480358 CCDC24Q8N4L8 307 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
SFXN2-203ENST00000480358 GREM2Q9H772 168 aa17.35■□□□□ 0.37
SFXN2-203ENST00000480358 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
SFXN2-203ENST00000480358 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
SFXN2-203ENST00000480358 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
SFXN2-203ENST00000480358 COPRSQ9NQ92 184 aa17.34■□□□□ 0.37
SFXN2-203ENST00000480358 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
SFXN2-203ENST00000480358 NOP58Q9Y2X3 529 aaKnown RBP17.34■□□□□ 0.37
SFXN2-203ENST00000480358 RTL9Q8NET4 1388 aa17.33■□□□□ 0.37
SFXN2-203ENST00000480358 PTPN12Q05209 780 aaKnown RBP17.33■□□□□ 0.37
SFXN2-203ENST00000480358 ITGA6P23229 1130 aa17.33■□□□□ 0.36
SFXN2-203ENST00000480358 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
SFXN2-203ENST00000480358 PA2G4Q9UQ80 394 aaKnown RBP17.33■□□□□ 0.36
SFXN2-203ENST00000480358 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
SFXN2-203ENST00000480358 C3orf67Q6ZVT6 689 aa17.32■□□□□ 0.36
SFXN2-203ENST00000480358 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
SFXN2-203ENST00000480358 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
SFXN2-203ENST00000480358 RAB11FIP3O75154 756 aa17.31■□□□□ 0.36
SFXN2-203ENST00000480358 MTFR1LQ9H019 292 aa17.31■□□□□ 0.36
SFXN2-203ENST00000480358 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
SFXN2-203ENST00000480358 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
SFXN2-203ENST00000480358 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
SFXN2-203ENST00000480358 ZBTB7AO95365 584 aa17.3■□□□□ 0.36
SFXN2-203ENST00000480358 NUCB1Q02818 461 aa17.3■□□□□ 0.36
SFXN2-203ENST00000480358 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
SFXN2-203ENST00000480358 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
SFXN2-203ENST00000480358 BRIP1Q9BX63 1249 aa17.3■□□□□ 0.36
SFXN2-203ENST00000480358 SIL1Q9H173 461 aa17.3■□□□□ 0.36
SFXN2-203ENST00000480358 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
SFXN2-203ENST00000480358 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
SFXN2-203ENST00000480358 APBB1O00213 710 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 LRRCC1Q9C099 1032 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-203ENST00000480358 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-203ENST00000480358 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 SEC31BQ9NQW1 1179 aa17.29■□□□□ 0.36
SFXN2-203ENST00000480358 CIAO1O76071 339 aa17.28■□□□□ 0.36
SFXN2-203ENST00000480358 KIF1BPQ96EK5 621 aa17.28■□□□□ 0.36
SFXN2-203ENST00000480358 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
SFXN2-203ENST00000480358 EYA2O00167 538 aa17.27■□□□□ 0.36
SFXN2-203ENST00000480358 RHPN1Q8TCX5 695 aa17.27■□□□□ 0.36
SFXN2-203ENST00000480358 PDE6BP35913 854 aa17.27■□□□□ 0.35
SFXN2-203ENST00000480358 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.35
SFXN2-203ENST00000480358 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.35
SFXN2-203ENST00000480358 POLD1P28340 1107 aa17.26■□□□□ 0.35
SFXN2-203ENST00000480358 IL15P40933 162 aaPredicted RBP17.26■□□□□ 0.35
SFXN2-203ENST00000480358 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
SFXN2-203ENST00000480358 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
SFXN2-203ENST00000480358 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
SFXN2-203ENST00000480358 LRP5O75197 1615 aa17.26■□□□□ 0.35
SFXN2-203ENST00000480358 IGHMBP2P38935 993 aaKnown RBP17.26■□□□□ 0.35
SFXN2-203ENST00000480358 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
SFXN2-203ENST00000480358 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
SFXN2-203ENST00000480358 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
SFXN2-203ENST00000480358 SASH1O94885 1247 aa17.25■□□□□ 0.35
SFXN2-203ENST00000480358 ANKRD18AQ8IVF6 992 aa17.25■□□□□ 0.35
SFXN2-203ENST00000480358 PUS3Q9BZE2 481 aaKnown RBP17.25■□□□□ 0.35
SFXN2-203ENST00000480358 CNNM1Q9NRU3 951 aa17.25■□□□□ 0.35
SFXN2-203ENST00000480358 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
SFXN2-203ENST00000480358 TAF1P21675 1872 aa17.25■□□□□ 0.35
SFXN2-203ENST00000480358 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
SFXN2-203ENST00000480358 RIPOR2Q9Y4F9 1068 aa17.24■□□□□ 0.35
SFXN2-203ENST00000480358 SPEF2Q9C093 1822 aa17.24■□□□□ 0.35
SFXN2-203ENST00000480358 C10orf71Q711Q0 1435 aa17.24■□□□□ 0.35
SFXN2-203ENST00000480358 HOXA10P31260 410 aaPredicted RBP17.24■□□□□ 0.35
SFXN2-203ENST00000480358 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
SFXN2-203ENST00000480358 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
SFXN2-203ENST00000480358 IL1RAPL2Q9NP60 686 aa17.24■□□□□ 0.35
SFXN2-203ENST00000480358 COL4A1P02462 1669 aa17.23■□□□□ 0.35
SFXN2-203ENST00000480358 SRGNP10124 158 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 GRAPQ13588 217 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
SFXN2-203ENST00000480358 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
SFXN2-203ENST00000480358 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
SFXN2-203ENST00000480358 NPR1P16066 1061 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 TFCP2Q12800 502 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 SKAP1Q86WV1 359 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 CRAMP1Q96RY5 1269 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
SFXN2-203ENST00000480358 COL11A2P13942 1736 aaPredicted RBP17.22■□□□□ 0.35
SFXN2-203ENST00000480358 CEP126Q9P2H0 1117 aa17.21■□□□□ 0.35
SFXN2-203ENST00000480358 H0YIN7 160 aa17.21■□□□□ 0.35
SFXN2-203ENST00000480358 PDE4AP27815 886 aa17.21■□□□□ 0.35
SFXN2-203ENST00000480358 METTL24Q5JXM2 366 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms