RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 ST3GAL1Q11201 340 aa10.3□□□□□ -0.76
PKP4-210ENST00000480171 PROSER3Q2NL68 480 aa10.3□□□□□ -0.76
PKP4-210ENST00000480171 LARP1Q6PKG0 1096 aaKnown RBP10.3□□□□□ -0.76
PKP4-210ENST00000480171 BOLA2Q9H3K6 86 aa10.3□□□□□ -0.76
PKP4-210ENST00000480171 BICC1Q9H694 974 aaKnown RBP10.3□□□□□ -0.76
PKP4-210ENST00000480171 AIMP1Q12904 312 aaKnown RBP10.3□□□□□ -0.76
PKP4-210ENST00000480171 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
PKP4-210ENST00000480171 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
PKP4-210ENST00000480171 TTC6Q86TZ1 520 aa10.3□□□□□ -0.76
PKP4-210ENST00000480171 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
PKP4-210ENST00000480171 FERMT3Q86UX7 667 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 SPATA32Q96LK8 384 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 DDX19AQ9NUU7 478 aaKnown RBP10.29□□□□□ -0.76
PKP4-210ENST00000480171 NPHP3Q7Z494 1330 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 GTF2F1P35269 517 aaKnown RBP eCLIP10.29□□□□□ -0.76
PKP4-210ENST00000480171 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 TNMDQ9H2S6 317 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 FER1L4A9Z1Z3 1794 aa10.29□□□□□ -0.76
PKP4-210ENST00000480171 A0A0D9SFI3 127 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 TYRO3Q06418 890 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 ANKRD24Q8TF21 1146 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 SIL1Q9H173 461 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 MED23Q9ULK4 1368 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 KAZALD1Q96I82 304 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 RGPD2P0DJD1 1756 aa10.28□□□□□ -0.76
PKP4-210ENST00000480171 GCP02774 474 aa10.27□□□□□ -0.76
PKP4-210ENST00000480171 LIG1P18858 919 aa10.27□□□□□ -0.76
PKP4-210ENST00000480171 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.76
PKP4-210ENST00000480171 SPC24Q8NBT2 197 aa10.27□□□□□ -0.76
PKP4-210ENST00000480171 PXDNQ92626 1479 aa10.27□□□□□ -0.77
PKP4-210ENST00000480171 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.77
PKP4-210ENST00000480171 DTNBO60941 627 aa10.27□□□□□ -0.77
PKP4-210ENST00000480171 C17orf53Q8N3J3 647 aaPredicted RBP10.27□□□□□ -0.77
PKP4-210ENST00000480171 DACT1Q9NYF0 836 aa10.27□□□□□ -0.77
PKP4-210ENST00000480171 TLR7Q9NYK1 1049 aaKnown RBP10.27□□□□□ -0.77
PKP4-210ENST00000480171 MRVI1Q9Y6F6 885 aa10.27□□□□□ -0.77
PKP4-210ENST00000480171 AP5Z1O43299 807 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 TOB2Q14106 344 aaPredicted RBP10.26□□□□□ -0.77
PKP4-210ENST00000480171 CAMK4Q16566 473 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 LEO1Q8WVC0 666 aaPredicted RBP10.26□□□□□ -0.77
PKP4-210ENST00000480171 CLSTN2Q9H4D0 955 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
PKP4-210ENST00000480171 PRAMEF22A3QJZ6 481 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 TAF5LO75529 589 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 CAVIN2O95810 425 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 ATP5JP18859 108 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 STK3Q13188 491 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 USPL1Q5W0Q7 1092 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 DRC7Q8IY82 874 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 BICD2Q8TD16 824 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 TCEANC2Q96MN5 208 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 CCDC94Q9BW85 323 aaPredicted RBP10.26□□□□□ -0.77
PKP4-210ENST00000480171 TFIP11Q9UBB9 837 aaKnown RBP10.26□□□□□ -0.77
PKP4-210ENST00000480171 JCADQ9P266 1359 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 H3BQV1 296 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 IGKV5-2P06315 115 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 GCKRQ14397 625 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 FAM173BQ6P4H8 233 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 ANKLE2Q86XL3 938 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 ZSCAN16Q9H4T2 348 aaPredicted RBP10.26□□□□□ -0.77
PKP4-210ENST00000480171 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
PKP4-210ENST00000480171 RFX7Q2KHR2 1363 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 PDIA6Q15084 440 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 ANO6Q4KMQ2 910 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
PKP4-210ENST00000480171 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
PKP4-210ENST00000480171 KCNF1Q9H3M0 494 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 COPRSQ9NQ92 184 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 PYCARDQ9ULZ3 195 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 LMTK3Q96Q04 1460 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 ZNF589Q86UQ0 364 aaPredicted RBP10.25□□□□□ -0.77
PKP4-210ENST00000480171 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 MYD88Q99836 296 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 CBX8Q9HC52 389 aa10.25□□□□□ -0.77
PKP4-210ENST00000480171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.25□□□□□ -0.77
PKP4-210ENST00000480171 MRC1P22897 1456 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 MYL6BP14649 208 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 CC2D2BQ6DHV5 1058 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 ZNF790Q6PG37 636 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 RBM43Q6ZSC3 357 aaKnown RBP10.24□□□□□ -0.77
PKP4-210ENST00000480171 XAGE3Q8WTP9 111 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 TRIM5Q9C035 493 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 SLIT3O75094 1523 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 CHRM1P11229 460 aaPredicted RBP10.24□□□□□ -0.77
PKP4-210ENST00000480171 TNNI3KQ59H18 835 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 SMAP1Q8IYB5 467 aaPredicted RBP10.24□□□□□ -0.77
PKP4-210ENST00000480171 TDRD7Q8NHU6 1098 aaKnown RBP10.24□□□□□ -0.77
PKP4-210ENST00000480171 KLHDC4Q8TBB5 520 aa10.24□□□□□ -0.77
PKP4-210ENST00000480171 RAPGEF4Q8WZA2 1011 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms