RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ALAS2	P22557	587 aa		7.68	□□□□□ -1.18
RBM39-231	ENST00000477334	KCNQ4	P56696	695 aa		7.68	□□□□□ -1.18
RBM39-231	ENST00000477334	SPEM2	Q0P670	501 aa		7.68	□□□□□ -1.18
RBM39-231	ENST00000477334	TREML1	Q86YW5	311 aa		7.68	□□□□□ -1.18
RBM39-231	ENST00000477334	SLC30A3	Q99726	388 aa		7.68	□□□□□ -1.18
RBM39-231	ENST00000477334	BIN2	Q9UBW5	565 aa	Predicted RBP	7.68	□□□□□ -1.18
RBM39-231	ENST00000477334	ADARB2-AS1	A8MUL3	147 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	MICAL2	O94851	1124 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	FAM13A	O94988	1023 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	NEUROD1	Q13562	356 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	BTLA	Q7Z6A9	289 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	ATCAY	Q86WG3	371 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	ABTB2	Q8N961	1025 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	TNFRSF25	Q93038	417 aa		7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	DMGDH	Q9UI17	866 aa	Known RBP	7.67	□□□□□ -1.18
RBM39-231	ENST00000477334	EIF1AX	P47813	144 aa	Known RBP	7.66	□□□□□ -1.18
RBM39-231	ENST00000477334	IDH3A	P50213	366 aa		7.66	□□□□□ -1.18
RBM39-231	ENST00000477334	AAMP	Q13685	434 aa		7.66	□□□□□ -1.18
RBM39-231	ENST00000477334	IER5	Q5VY09	327 aa		7.66	□□□□□ -1.18
RBM39-231	ENST00000477334	KCNH4	Q9UQ05	1017 aa		7.66	□□□□□ -1.18
RBM39-231	ENST00000477334	NPR3	P17342	541 aa		7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	ZAP70	P43403	619 aa		7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	ECM1	Q16610	540 aa		7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	NOM1	Q5C9Z4	860 aa	Known RBP	7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	TRIM11	Q96F44	468 aa		7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	USP20	Q9Y2K6	914 aa		7.65	□□□□□ -1.18
RBM39-231	ENST00000477334	OPLAH	O14841	1288 aa		7.64	□□□□□ -1.19
RBM39-231	ENST00000477334	GPR152	Q8TDT2	470 aa		7.64	□□□□□ -1.19
RBM39-231	ENST00000477334	KRTAP4-8	Q9BYQ9	185 aa		7.64	□□□□□ -1.19
RBM39-231	ENST00000477334	ADAM23	O75077	832 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	INPP5B	P32019	993 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	ADH7	P40394	386 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	ARSD	P51689	593 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	ARHGAP4	P98171	946 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	ALKBH2	Q6NS38	261 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	RGL4	Q8IZJ4	473 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	PLVAP	Q9BX97	442 aa		7.63	□□□□□ -1.19
RBM39-231	ENST00000477334	C1QTNF9B	B2RNN3	333 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334		M0R082	166 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	BAG6	P46379	1132 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	DNM1	Q05193	864 aa	Known RBP	7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	CD163	Q86VB7	1156 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	ZNF417	Q8TAU3	575 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	EDEM1	Q92611	657 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	CCDC87	Q9NVE4	849 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	STARD13	Q9Y3M8	1113 aa		7.62	□□□□□ -1.19
RBM39-231	ENST00000477334	SPATA31C1	P0DKV0	1188 aa		7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	GRN	P28799	593 aa	Known RBP	7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	CHRNA4	P43681	627 aa		7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	CMTR1	Q8N1G2	835 aa	Known RBP	7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	BHMT	Q93088	406 aa		7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	PRDM6	Q9NQX0	595 aa		7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	RTCB	Q9Y3I0	505 aa	Known RBP	7.61	□□□□□ -1.19
RBM39-231	ENST00000477334	SPDYE3	A6NKU9	549 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	FZD6	O60353	706 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	ALB	P02768	609 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	EPB42	P16452	691 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	NUDT16	Q96DE0	195 aa	Known RBP	7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	EFCC1	Q9HA90	598 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	FAM13B	Q9NYF5	915 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	POLI	Q9UNA4	740 aa		7.6	□□□□□ -1.19
RBM39-231	ENST00000477334	COL9A3	Q14050	684 aa	Predicted RBP	7.59	□□□□□ -1.19
RBM39-231	ENST00000477334	XP32	Q5T750	250 aa		7.59	□□□□□ -1.19
RBM39-231	ENST00000477334	MICALL1	Q8N3F8	863 aa		7.59	□□□□□ -1.19
RBM39-231	ENST00000477334	PIK3R5	Q8WYR1	880 aa		7.59	□□□□□ -1.19
RBM39-231	ENST00000477334	BRPF3	Q9ULD4	1205 aa		7.59	□□□□□ -1.19
RBM39-231	ENST00000477334		K7ELQ4	463 aa	Predicted RBP	7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	NDUFB5	O43674	189 aa		7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	PDGFA	P04085	211 aa		7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	MAPK1	P28482	360 aa		7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	MZF1	P28698	734 aa	Predicted RBP	7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	TMCO4	Q5TGY1	634 aa		7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	UBE2O	Q9C0C9	1292 aa	Known RBP	7.58	□□□□□ -1.2
RBM39-231	ENST00000477334	KCNMB2	Q9Y691	235 aa		7.58	□□□□□ -1.2
RBM39-231	ENST00000477334		A6NHS1	94 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	PCSK2	P16519	638 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	TRIP4	Q15650	581 aa	Predicted RBP	7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	CCDC27	Q2M243	656 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	C8orf34	Q49A92	452 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	PRRT3	Q5FWE3	981 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	C20orf204	Q6ZNR8	217 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	C8orf86	Q6ZUL3	223 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	GSX2	Q9BZM3	304 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	DCTN4	Q9UJW0	460 aa		7.57	□□□□□ -1.2
RBM39-231	ENST00000477334	UBAP1L	F5GYI3	381 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	XYLB	O75191	536 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	FURIN	P09958	794 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	NID1	P14543	1247 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	TBC1D8B	Q0IIM8	1120 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	CCIN	Q13939	588 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	KRT25	Q7Z3Z0	450 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	TTC16	Q8NEE8	873 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	TMC1	Q8TDI8	760 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	PNMA5	Q96PV4	448 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	GGNBP2	Q9H3C7	697 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	PODXL2	Q9NZ53	605 aa		7.56	□□□□□ -1.2
RBM39-231	ENST00000477334	SLC6A14	Q9UN76	642 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms