RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 WDR90Q96KV7 1748 aa27.09■■□□□ 1.93
LIME1-204ENST00000476183 NEURL1BA8MQ27 555 aa27.08■■□□□ 1.93
LIME1-204ENST00000476183 NEXNQ0ZGT2 675 aa27.08■■□□□ 1.93
LIME1-204ENST00000476183 SP8Q8IXZ3 490 aa27.08■■□□□ 1.93
LIME1-204ENST00000476183 CELF1Q92879 486 aaKnown RBP27.08■■□□□ 1.93
LIME1-204ENST00000476183 DDNO94850 711 aaPredicted RBP27.07■■□□□ 1.92
LIME1-204ENST00000476183 DIEXFQ68CQ4 756 aaKnown RBP27.07■■□□□ 1.92
LIME1-204ENST00000476183 ZNF541Q9H0D2 1346 aa27.07■■□□□ 1.92
LIME1-204ENST00000476183 E9PSI1 815 aa27.06■■□□□ 1.92
LIME1-204ENST00000476183 DNAAF4Q8WXU2 420 aa27.06■■□□□ 1.92
LIME1-204ENST00000476183 FZD9O00144 591 aa27.05■■□□□ 1.92
LIME1-204ENST00000476183 VEGFAP15692 232 aaPredicted RBP27.05■■□□□ 1.92
LIME1-204ENST00000476183 SLFN5Q08AF3 891 aa27.05■■□□□ 1.92
LIME1-204ENST00000476183 MIER1Q8N108 512 aa27.05■■□□□ 1.92
LIME1-204ENST00000476183 CDCA7LQ96GN5 454 aa27.05■■□□□ 1.92
LIME1-204ENST00000476183 TMX4Q9H1E5 349 aaPredicted RBP27.05■■□□□ 1.92
LIME1-204ENST00000476183 CDHR2Q9BYE9 1310 aa27.05■■□□□ 1.92
LIME1-204ENST00000476183 LRRC37AA6NMS7 1700 aa27.04■■□□□ 1.92
LIME1-204ENST00000476183 CEP350Q5VT06 3117 aa27.04■■□□□ 1.92
LIME1-204ENST00000476183 PDE8AO60658 829 aa27.04■■□□□ 1.92
LIME1-204ENST00000476183 C16orf71Q8IYS4 520 aaPredicted RBP27.04■■□□□ 1.92
LIME1-204ENST00000476183 RBM46Q8TBY0 533 aaKnown RBP27.04■■□□□ 1.92
LIME1-204ENST00000476183 SEC31BQ9NQW1 1179 aa27.04■■□□□ 1.92
LIME1-204ENST00000476183 HSP90B1P14625 803 aaKnown RBP27.03■■□□□ 1.92
LIME1-204ENST00000476183 TMC4Q7Z404 712 aa27.03■■□□□ 1.92
LIME1-204ENST00000476183 RTFDC1Q9BY42 306 aaPredicted RBP27.03■■□□□ 1.92
LIME1-204ENST00000476183 F6X3S4 739 aa27.02■■□□□ 1.92
LIME1-204ENST00000476183 GCKRQ14397 625 aa27.02■■□□□ 1.92
LIME1-204ENST00000476183 DPP8Q6V1X1 898 aaPredicted RBP27.02■■□□□ 1.92
LIME1-204ENST00000476183 LARGE2Q8N3Y3 721 aa27.02■■□□□ 1.92
LIME1-204ENST00000476183 MPNDQ8N594 471 aa27.02■■□□□ 1.92
LIME1-204ENST00000476183 CCDC85AQ96PX6 553 aaPredicted RBP27.02■■□□□ 1.92
LIME1-204ENST00000476183 H7C1W4 665 aa27.01■■□□□ 1.91
LIME1-204ENST00000476183 JDP2Q8WYK2 163 aa27.01■■□□□ 1.91
LIME1-204ENST00000476183 DUOX1Q9NRD9 1551 aa27.01■■□□□ 1.91
LIME1-204ENST00000476183 PPIP5K2O43314 1243 aa27■■□□□ 1.91
LIME1-204ENST00000476183 HSPA6P17066 643 aa27■■□□□ 1.91
LIME1-204ENST00000476183 RPS8P62241 208 aaKnown RBP27■■□□□ 1.91
LIME1-204ENST00000476183 AOC3Q16853 763 aa27■■□□□ 1.91
LIME1-204ENST00000476183 CCDC152Q4G0S7 254 aa27■■□□□ 1.91
LIME1-204ENST00000476183 LINS1Q8NG48 757 aa27■■□□□ 1.91
LIME1-204ENST00000476183 UBE3BQ7Z3V4 1068 aa26.99■■□□□ 1.91
LIME1-204ENST00000476183 L3MBTL3Q96JM7 780 aaPredicted RBP26.99■■□□□ 1.91
LIME1-204ENST00000476183 MYH3P11055 1940 aa26.98■■□□□ 1.91
LIME1-204ENST00000476183 CASP7P55210 303 aa26.98■■□□□ 1.91
LIME1-204ENST00000476183 CTSWP56202 376 aa26.98■■□□□ 1.91
LIME1-204ENST00000476183 TRMT2AQ8IZ69 625 aaKnown RBP26.98■■□□□ 1.91
LIME1-204ENST00000476183 SUPT20HQ8NEM7 779 aa26.98■■□□□ 1.91
LIME1-204ENST00000476183 BEND3Q5T5X7 828 aa26.97■■□□□ 1.91
LIME1-204ENST00000476183 VPS33BQ9H267 617 aa26.97■■□□□ 1.91
LIME1-204ENST00000476183 GPSM2P81274 684 aa26.96■■□□□ 1.91
LIME1-204ENST00000476183 NIM1KQ8IY84 436 aa26.96■■□□□ 1.91
LIME1-204ENST00000476183 MRPL50Q8N5N7 158 aaKnown RBP26.96■■□□□ 1.91
LIME1-204ENST00000476183 TTLL11Q8NHH1 800 aa26.96■■□□□ 1.91
LIME1-204ENST00000476183 LTBP1Q14766 1721 aa26.96■■□□□ 1.91
LIME1-204ENST00000476183 KIAA2012Q0VF49 1180 aa26.95■■□□□ 1.9
LIME1-204ENST00000476183 FSTL1Q12841 308 aa26.95■■□□□ 1.9
LIME1-204ENST00000476183 NSFL1CQ9UNZ2 370 aaKnown RBP26.95■■□□□ 1.9
LIME1-204ENST00000476183 SCN4AP35499 1836 aa26.95■■□□□ 1.9
LIME1-204ENST00000476183 EIF6P56537 245 aaKnown RBP26.94■■□□□ 1.9
LIME1-204ENST00000476183 GPC2Q8N158 579 aa26.94■■□□□ 1.9
LIME1-204ENST00000476183 GREM2Q9H772 168 aa26.94■■□□□ 1.9
LIME1-204ENST00000476183 SMC1BQ8NDV3 1235 aa26.93■■□□□ 1.9
LIME1-204ENST00000476183 SSH1Q8WYL5 1049 aa26.93■■□□□ 1.9
LIME1-204ENST00000476183 PLA2G12BQ9BX93 195 aa26.93■■□□□ 1.9
LIME1-204ENST00000476183 POLLQ9UGP5 575 aa26.93■■□□□ 1.9
LIME1-204ENST00000476183 POTEIP0CG38 1075 aa26.92■■□□□ 1.9
LIME1-204ENST00000476183 POTEJP0CG39 1038 aa26.92■■□□□ 1.9
LIME1-204ENST00000476183 GJA3Q9Y6H8 435 aa26.92■■□□□ 1.9
LIME1-204ENST00000476183 IQCA1LA6NCM1 817 aa26.91■■□□□ 1.9
LIME1-204ENST00000476183 TAF1DQ9H5J8 278 aaPredicted RBP26.91■■□□□ 1.9
LIME1-204ENST00000476183 RTL9Q8NET4 1388 aa26.91■■□□□ 1.9
LIME1-204ENST00000476183 ANKRD18AQ8IVF6 992 aa26.9■■□□□ 1.9
LIME1-204ENST00000476183 ZNRF3Q9ULT6 936 aa26.9■■□□□ 1.9
LIME1-204ENST00000476183 SLC4A10Q6U841 1118 aa26.89■■□□□ 1.9
LIME1-204ENST00000476183 TBC1D16Q8TBP0 767 aa26.89■■□□□ 1.9
LIME1-204ENST00000476183 GPR101Q96P66 508 aaPredicted RBP26.89■■□□□ 1.9
LIME1-204ENST00000476183 BCL2L13Q9BXK5 485 aa26.89■■□□□ 1.9
LIME1-204ENST00000476183 HACL1Q9UJ83 578 aa26.89■■□□□ 1.9
LIME1-204ENST00000476183 SPEF2Q9C093 1822 aa26.88■■□□□ 1.89
LIME1-204ENST00000476183 C6orf229H3BNL8 230 aa26.88■■□□□ 1.89
LIME1-204ENST00000476183 CSF1RP07333 972 aa26.88■■□□□ 1.89
LIME1-204ENST00000476183 CXCL9Q07325 125 aa26.88■■□□□ 1.89
LIME1-204ENST00000476183 CDC5LQ99459 802 aaKnown RBP26.88■■□□□ 1.89
LIME1-204ENST00000476183 PODXL2Q9NZ53 605 aa26.88■■□□□ 1.89
LIME1-204ENST00000476183 YDJCA8MPS7 323 aa26.87■■□□□ 1.89
LIME1-204ENST00000476183 RIMBP2O15034 1052 aa26.87■■□□□ 1.89
LIME1-204ENST00000476183 WASHC4Q2M389 1173 aa26.87■■□□□ 1.89
LIME1-204ENST00000476183 FAM161AQ3B820 660 aa26.87■■□□□ 1.89
LIME1-204ENST00000476183 ALDH1L1O75891 902 aa26.86■■□□□ 1.89
LIME1-204ENST00000476183 EPHX2P34913 555 aa26.86■■□□□ 1.89
LIME1-204ENST00000476183 SCNN1DP51172 638 aa26.86■■□□□ 1.89
LIME1-204ENST00000476183 APLP1P51693 650 aa26.86■■□□□ 1.89
LIME1-204ENST00000476183 ANKIB1Q9P2G1 1089 aa26.86■■□□□ 1.89
LIME1-204ENST00000476183 GRM8O00222 908 aa26.85■■□□□ 1.89
LIME1-204ENST00000476183 FOXO4P98177 505 aa26.85■■□□□ 1.89
LIME1-204ENST00000476183 ALDH1L2Q3SY69 923 aa26.85■■□□□ 1.89
LIME1-204ENST00000476183 SRCIN1Q9C0H9 1055 aa26.85■■□□□ 1.89
LIME1-204ENST00000476183 BSDC1Q9NW68 430 aaPredicted RBP26.85■■□□□ 1.89
LIME1-204ENST00000476183 PTPRCP08575 1304 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms