RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TMEM63CQ9P1W3 806 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 POLKQ9UBT6 870 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 PCSK1NQ9UHG2 260 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 DDX41Q9UJV9 622 aaKnown RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 ZNF777Q9ULD5 760 aaPredicted RBP4.48□□□□□ -1.69
LSM2-211ENST00000475835 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.48□□□□□ -1.69
LSM2-211ENST00000475835 IQGAP2Q13576 1575 aa4.48□□□□□ -1.69
LSM2-211ENST00000475835 SOS1Q07889 1333 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 SMG6Q86US8 1419 aaKnown RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 ARHGEF11O15085 1522 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 KDM6BO15054 1643 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 TLDC2A0PJX2 215 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 PLIN1O60240 522 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 SASH1O94885 1247 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 FMNL1O95466 1100 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 HNRNPCP07910 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
LSM2-211ENST00000475835 ATXN8OSP0DMR3 200 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 GCFC2P16383 781 aaKnown RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 CCNCP24863 283 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 CHMLP26374 656 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 CDR1P51861 262 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 EIF4G2P78344 907 aaKnown RBP eCLIP4.47□□□□□ -1.69
LSM2-211ENST00000475835 POU5F1BQ06416 359 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 IQCB1Q15051 598 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 CNGA3Q16281 694 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 FXNQ16595 210 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 KIAA0753Q2KHM9 967 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 SKOR2Q2VWA4 1001 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 SLC4A8Q2Y0W8 1093 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 B4GALNT3Q6L9W6 998 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 SEPT14Q6ZU15 432 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 DPH6Q7L8W6 267 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 BRSK2Q8IWQ3 736 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 CCDC65Q8IXS2 484 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 PEX5LQ8IYB4 626 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 NDUFAF2Q8N183 169 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 ARMC2Q8NEN0 867 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 GIMAP7Q8NHV1 300 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 USP33Q8TEY7 942 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 KCNB2Q92953 911 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 CLUAP1Q96AJ1 413 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 NAF1Q96HR8 494 aaKnown RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 GSDMAQ96QA5 445 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 SH3GL1Q99961 368 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 BRINP2Q9C0B6 783 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 LRRC27Q9C0I9 530 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 NACA2Q9H009 215 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 FAM107BQ9H098 131 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 MUC3BQ9H195 1237 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 DHX36Q9H2U1 1008 aaKnown RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 GPCPD1Q9NPB8 672 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 ATG3Q9NT62 314 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 RABL2AQ9UBK7 228 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 GABBR1Q9UBS5 961 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 MKL2Q9ULH7 1088 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 DIS3Q9Y2L1 958 aaKnown RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 TMA7Q9Y2S6 64 aaKnown RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 N6AMT1Q9Y5N5 214 aa4.47□□□□□ -1.69
LSM2-211ENST00000475835 V9GYY5 206 aaPredicted RBP4.47□□□□□ -1.69
LSM2-211ENST00000475835 PTPRKQ15262 1439 aa4.46□□□□□ -1.69
LSM2-211ENST00000475835 ARHGAP31Q2M1Z3 1444 aa4.46□□□□□ -1.69
LSM2-211ENST00000475835 MIA2Q96PC5 1412 aa4.46□□□□□ -1.69
LSM2-211ENST00000475835 WDR62O43379 1518 aa4.46□□□□□ -1.69
LSM2-211ENST00000475835 ROCK1Q13464 1354 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 CCDC7Q96M83 1385 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 MYO1BO43795 1136 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 OPA1O60313 960 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 FCHSD2O94868 740 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 ATG7O95352 703 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 CSB-PGBD3P0DP91 1061 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 PECAM1P16284 738 aaPredicted RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 HNRNPH2P55795 449 aaKnown RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 EVA1CP58658 441 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 NSUN2Q08J23 767 aaKnown RBP eCLIP4.46□□□□□ -1.7
LSM2-211ENST00000475835 GPS2Q13227 327 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 EIF4A2Q14240 407 aaKnown RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 NEDD9Q14511 834 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 ZRSR1Q15695 479 aaKnown RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 CLPPQ16740 277 aaPredicted RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 MUM1Q2TAK8 710 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 PREPLQ4J6C6 727 aaPredicted RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 COBLL1Q53SF7 1204 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 TEX35Q5T0J7 233 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 SFMBT2Q5VUG0 894 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 SND1Q7KZF4 910 aaKnown RBP eCLIP4.46□□□□□ -1.7
LSM2-211ENST00000475835 CDC37L1Q7L3B6 337 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 SPATA21Q7Z572 469 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 DAAM2Q86T65 1068 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 KIAA1328Q86T90 577 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 SRLQ86TD4 932 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 NT5DC4Q86YG4 428 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 FAM114A1Q8IWE2 563 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 PLPP6Q8IY26 295 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 SAMD14Q8IZD0 417 aaPredicted RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 CLASRPQ8N2M8 674 aaKnown RBP4.46□□□□□ -1.7
LSM2-211ENST00000475835 ARL6IP6Q8N6S5 226 aa4.46□□□□□ -1.7
LSM2-211ENST00000475835 GABPB2Q8TAK5 448 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms