RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SEPT3Q9UH03 358 aa9.25□□□□□ -0.93
LTN1-204ENST00000475344 CARNS1A5YM72 827 aa9.24□□□□□ -0.93
LTN1-204ENST00000475344 TNFRSF10BO14763 440 aa9.24□□□□□ -0.93
LTN1-204ENST00000475344 MSTNO14793 375 aa9.24□□□□□ -0.93
LTN1-204ENST00000475344 CPB1P15086 417 aa9.24□□□□□ -0.93
LTN1-204ENST00000475344 PSAPL1Q6NUJ1 521 aa9.24□□□□□ -0.93
LTN1-204ENST00000475344 DHX32Q7L7V1 743 aaKnown RBP9.24□□□□□ -0.93
LTN1-204ENST00000475344 FAM35AQ86V20 835 aa9.24□□□□□ -0.93
LTN1-204ENST00000475344 ALYREFQ86V81 257 aaKnown RBP9.24□□□□□ -0.93
LTN1-204ENST00000475344 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
LTN1-204ENST00000475344 LILRB5O75023 590 aa9.23□□□□□ -0.93
LTN1-204ENST00000475344 IGHA1P01876 353 aa9.23□□□□□ -0.93
LTN1-204ENST00000475344 NAGPAQ9UK23 515 aa9.23□□□□□ -0.93
LTN1-204ENST00000475344 TMEM88BA6NKF7 163 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 ITGB2P05107 769 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 ZAP70P43403 619 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 HFE2Q6ZVN8 426 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 SPOCK3Q9BQ16 436 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 STIM2Q9P246 746 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 KCNMB2Q9Y691 235 aa9.22□□□□□ -0.93
LTN1-204ENST00000475344 RGS9O75916 674 aaPredicted RBP9.21□□□□□ -0.94
LTN1-204ENST00000475344 PCSK7Q16549 785 aa9.21□□□□□ -0.94
LTN1-204ENST00000475344 PRRT3Q5FWE3 981 aa9.21□□□□□ -0.94
LTN1-204ENST00000475344 TRAPPC3LQ5T215 181 aa9.21□□□□□ -0.94
LTN1-204ENST00000475344 MAP3K6O95382 1288 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 GPR152Q8TDT2 470 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 PIK3R5Q8WYR1 880 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 C11orf16Q9NQ32 467 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 FAM13BQ9NYF5 915 aa9.2□□□□□ -0.94
LTN1-204ENST00000475344 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 UBAP1LF5GYI3 381 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 ZBTB39O15060 712 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 SPATA31C1P0DKV0 1188 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 NID1P14543 1247 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 ARID4AP29374 1257 aaPredicted RBP9.19□□□□□ -0.94
LTN1-204ENST00000475344 TRIM28Q13263 835 aaKnown RBP9.19□□□□□ -0.94
LTN1-204ENST00000475344 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
LTN1-204ENST00000475344 TRIP4Q15650 581 aaPredicted RBP9.19□□□□□ -0.94
LTN1-204ENST00000475344 ELMSAN1Q6PJG2 1045 aa9.19□□□□□ -0.94
LTN1-204ENST00000475344 MMP20O60882 483 aa9.18□□□□□ -0.94
LTN1-204ENST00000475344 EGFRP00533 1210 aa9.18□□□□□ -0.94
LTN1-204ENST00000475344 PSAPP07602 524 aa9.18□□□□□ -0.94
LTN1-204ENST00000475344 EIF2AK2P19525 551 aaKnown RBP9.18□□□□□ -0.94
LTN1-204ENST00000475344 CHRNA4P43681 627 aa9.18□□□□□ -0.94
LTN1-204ENST00000475344 CD163Q86VB7 1156 aa9.18□□□□□ -0.94
LTN1-204ENST00000475344 NSUN5Q96P11 429 aaKnown RBP9.18□□□□□ -0.94
LTN1-204ENST00000475344 PRDM6Q9NQX0 595 aa9.18□□□□□ -0.94
LTN1-204ENST00000475344 PROCP04070 461 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
LTN1-204ENST00000475344 GPLD1P80108 840 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 PERM1Q5SV97 790 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 NLRP13Q86W25 1043 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 ATCAYQ86WG3 371 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 TRPM4Q8TD43 1214 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 TLR7Q9NYK1 1049 aaKnown RBP9.17□□□□□ -0.94
LTN1-204ENST00000475344 TIMELESSQ9UNS1 1208 aa9.17□□□□□ -0.94
LTN1-204ENST00000475344 J3QW42 95 aa9.16□□□□□ -0.94
LTN1-204ENST00000475344 APBA3O96018 575 aa9.16□□□□□ -0.94
LTN1-204ENST00000475344 SSFA2P28290 1259 aa9.16□□□□□ -0.94
LTN1-204ENST00000475344 PLAURQ03405 335 aa9.16□□□□□ -0.94
LTN1-204ENST00000475344 MTMR3Q13615 1198 aa9.16□□□□□ -0.94
LTN1-204ENST00000475344 LPIN3Q9BQK8 851 aa9.16□□□□□ -0.94
LTN1-204ENST00000475344 NRLP54845 237 aa9.15□□□□□ -0.94
LTN1-204ENST00000475344 GRIK4Q16099 956 aa9.15□□□□□ -0.94
LTN1-204ENST00000475344 DMRTC2Q8IXT2 367 aaPredicted RBP9.15□□□□□ -0.94
LTN1-204ENST00000475344 HELQQ8TDG4 1101 aa9.15□□□□□ -0.94
LTN1-204ENST00000475344 GTF3C2Q8WUA4 911 aaPredicted RBP9.15□□□□□ -0.94
LTN1-204ENST00000475344 SMG9Q9H0W8 520 aaKnown RBP9.15□□□□□ -0.94
LTN1-204ENST00000475344 FNDC3AQ9Y2H6 1198 aaKnown RBP9.15□□□□□ -0.94
LTN1-204ENST00000475344 GHRHP01286 108 aa9.14□□□□□ -0.95
LTN1-204ENST00000475344 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
LTN1-204ENST00000475344 MPSTP25325 297 aa9.13□□□□□ -0.95
LTN1-204ENST00000475344 SIK1P57059 783 aa9.13□□□□□ -0.95
LTN1-204ENST00000475344 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
LTN1-204ENST00000475344 AAMPQ13685 434 aa9.13□□□□□ -0.95
LTN1-204ENST00000475344 EDEM1Q92611 657 aa9.13□□□□□ -0.95
LTN1-204ENST00000475344 NUDT16Q96DE0 195 aaKnown RBP9.13□□□□□ -0.95
LTN1-204ENST00000475344 FRRS1LQ9P0K9 344 aa9.13□□□□□ -0.95
LTN1-204ENST00000475344 A0A0A0MRY4 1105 aa9.12□□□□□ -0.95
LTN1-204ENST00000475344 ABL1P00519 1130 aa9.12□□□□□ -0.95
LTN1-204ENST00000475344 BAG6P46379 1132 aa9.12□□□□□ -0.95
LTN1-204ENST00000475344 RAC1P63000 192 aa9.12□□□□□ -0.95
LTN1-204ENST00000475344 NOM1Q5C9Z4 860 aaKnown RBP9.12□□□□□ -0.95
LTN1-204ENST00000475344 TTC39BQ5VTQ0 682 aaPredicted RBP9.12□□□□□ -0.95
LTN1-204ENST00000475344 RBSNQ9H1K0 784 aa9.12□□□□□ -0.95
LTN1-204ENST00000475344 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
LTN1-204ENST00000475344 GDF6Q6KF10 455 aaPredicted RBP9.11□□□□□ -0.95
LTN1-204ENST00000475344 PLD4Q96BZ4 506 aa9.11□□□□□ -0.95
LTN1-204ENST00000475344 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
LTN1-204ENST00000475344 MTMR7Q9Y216 660 aa9.11□□□□□ -0.95
LTN1-204ENST00000475344 SOX18P35713 384 aa9.1□□□□□ -0.95
LTN1-204ENST00000475344 EIF1AXP47813 144 aaKnown RBP9.1□□□□□ -0.95
LTN1-204ENST00000475344 C8orf34Q49A92 452 aa9.1□□□□□ -0.95
LTN1-204ENST00000475344 ZNF438Q7Z4V0 828 aa9.1□□□□□ -0.95
LTN1-204ENST00000475344 WFDC8Q8IUA0 241 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms