RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CDC45O75419 566 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 CIAO1O76071 339 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 PHF14O94880 888 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 APBA3O96018 575 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 IFIT2P09913 472 aaKnown RBP16.86■□□□□ 0.29
TRAF4-210ENST00000475329 RFC4P35249 363 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 IFIT5Q13325 482 aaKnown RBP16.86■□□□□ 0.29
TRAF4-210ENST00000475329 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
TRAF4-210ENST00000475329 SSFA2P28290 1259 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 AACSQ86V21 672 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 AMIGO3Q86WK7 504 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 TTLL11Q8NHH1 800 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
TRAF4-210ENST00000475329 EYA2O00167 538 aa16.84■□□□□ 0.29
TRAF4-210ENST00000475329 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-210ENST00000475329 TSHZ3Q63HK5 1081 aa16.84■□□□□ 0.29
TRAF4-210ENST00000475329 NYXQ9GZU5 481 aa16.84■□□□□ 0.29
TRAF4-210ENST00000475329 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
TRAF4-210ENST00000475329 A0A1B0GUL6 1792 aa16.84■□□□□ 0.29
TRAF4-210ENST00000475329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.83■□□□□ 0.28
TRAF4-210ENST00000475329 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 ZNF609O15014 1411 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 ERC2O15083 957 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 SDSP20132 328 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 TFCP2Q12800 502 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 QSER1Q2KHR3 1735 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 ATG9AQ7Z3C6 839 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 ZNF594Q96JF6 807 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-210ENST00000475329 CCDC85AQ96PX6 553 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-210ENST00000475329 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 GREM2Q9H772 168 aa16.83■□□□□ 0.28
TRAF4-210ENST00000475329 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
TRAF4-210ENST00000475329 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
TRAF4-210ENST00000475329 HCLS1P14317 486 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-210ENST00000475329 ITGA6P23229 1130 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 TNNI3KQ59H18 835 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 CCDC125Q86Z20 511 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 PROM2Q8N271 834 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 PI4K2BQ8TCG2 481 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-210ENST00000475329 ECHDC1Q9NTX5 307 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 FPGT-TNNI3KV9GXZ4 949 aa16.82■□□□□ 0.28
TRAF4-210ENST00000475329 EP400Q96L91 3159 aa16.81■□□□□ 0.28
TRAF4-210ENST00000475329 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
TRAF4-210ENST00000475329 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
TRAF4-210ENST00000475329 SEC24BO95487 1268 aa16.81■□□□□ 0.28
TRAF4-210ENST00000475329 ANP32AP39687 249 aaKnown RBP16.81■□□□□ 0.28
TRAF4-210ENST00000475329 CCDC152Q4G0S7 254 aa16.81■□□□□ 0.28
TRAF4-210ENST00000475329 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
TRAF4-210ENST00000475329 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
TRAF4-210ENST00000475329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
TRAF4-210ENST00000475329 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
TRAF4-210ENST00000475329 RIC1Q4ADV7 1423 aa16.8■□□□□ 0.28
TRAF4-210ENST00000475329 ERFEQ4G0M1 354 aa16.8■□□□□ 0.28
TRAF4-210ENST00000475329 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
TRAF4-210ENST00000475329 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-210ENST00000475329 TAF1P21675 1872 aa16.8■□□□□ 0.28
TRAF4-210ENST00000475329 ABCC12Q96J65 1359 aa16.79■□□□□ 0.28
TRAF4-210ENST00000475329 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
TRAF4-210ENST00000475329 GTF2E1P29083 439 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-210ENST00000475329 PUS3Q9BZE2 481 aaKnown RBP16.79■□□□□ 0.28
TRAF4-210ENST00000475329 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-210ENST00000475329 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
TRAF4-210ENST00000475329 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
TRAF4-210ENST00000475329 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
TRAF4-210ENST00000475329 CNNM1Q9NRU3 951 aa16.78■□□□□ 0.28
TRAF4-210ENST00000475329 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
TRAF4-210ENST00000475329 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
TRAF4-210ENST00000475329 ZNF827Q17R98 1081 aa16.77■□□□□ 0.28
TRAF4-210ENST00000475329 TPTE2Q6XPS3 522 aa16.77■□□□□ 0.28
TRAF4-210ENST00000475329 LDHAL6AQ6ZMR3 332 aa16.77■□□□□ 0.28
TRAF4-210ENST00000475329 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
TRAF4-210ENST00000475329 RILPL2Q969X0 211 aa16.77■□□□□ 0.28
TRAF4-210ENST00000475329 DBNLQ9UJU6 430 aaKnown RBP16.77■□□□□ 0.28
TRAF4-210ENST00000475329 GYS1P13807 737 aa16.76■□□□□ 0.27
TRAF4-210ENST00000475329 NFIXQ14938 502 aa16.76■□□□□ 0.27
TRAF4-210ENST00000475329 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
TRAF4-210ENST00000475329 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
TRAF4-210ENST00000475329 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
TRAF4-210ENST00000475329 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
TRAF4-210ENST00000475329 NRXN2Q9P2S2 1712 aa16.76■□□□□ 0.27
TRAF4-210ENST00000475329 NPHP1O15259 732 aa16.75■□□□□ 0.27
TRAF4-210ENST00000475329 METTL24Q5JXM2 366 aa16.75■□□□□ 0.27
TRAF4-210ENST00000475329 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
TRAF4-210ENST00000475329 CDC5LQ99459 802 aaKnown RBP16.75■□□□□ 0.27
TRAF4-210ENST00000475329 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 ATP5JP18859 108 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 IGHMBP2P38935 993 aaKnown RBP16.74■□□□□ 0.27
TRAF4-210ENST00000475329 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 TBC1D32Q96NH3 1257 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 MPHOSPH8Q99549 860 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 DBNDD2Q9BQY9 259 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 SEC31BQ9NQW1 1179 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms