RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 TCERG1O14776 1098 aaKnown RBP26.18■■□□□ 1.78
SNX13-206ENST00000474067 OLFM4Q6UX06 510 aa26.18■■□□□ 1.78
SNX13-206ENST00000474067 NIM1KQ8IY84 436 aa26.18■■□□□ 1.78
SNX13-206ENST00000474067 MPNDQ8N594 471 aa26.18■■□□□ 1.78
SNX13-206ENST00000474067 L3MBTL3Q96JM7 780 aaPredicted RBP26.18■■□□□ 1.78
SNX13-206ENST00000474067 PDE8AO60658 829 aa26.17■■□□□ 1.78
SNX13-206ENST00000474067 DDNO94850 711 aaPredicted RBP26.17■■□□□ 1.78
SNX13-206ENST00000474067 CCDC152Q4G0S7 254 aa26.17■■□□□ 1.78
SNX13-206ENST00000474067 GPC2Q8N158 579 aa26.17■■□□□ 1.78
SNX13-206ENST00000474067 DDX60Q8IY21 1712 aaKnown RBP26.17■■□□□ 1.78
SNX13-206ENST00000474067 CCER2I3L3R5 266 aa26.16■■□□□ 1.78
SNX13-206ENST00000474067 PPIP5K2O43314 1243 aa26.16■■□□□ 1.78
SNX13-206ENST00000474067 FLIIQ13045 1269 aa26.16■■□□□ 1.78
SNX13-206ENST00000474067 RTFDC1Q9BY42 306 aaPredicted RBP26.16■■□□□ 1.78
SNX13-206ENST00000474067 CDHR2Q9BYE9 1310 aa26.15■■□□□ 1.78
SNX13-206ENST00000474067 VAMP4O75379 141 aa26.15■■□□□ 1.78
SNX13-206ENST00000474067 EXOSC9Q06265 439 aaKnown RBP26.15■■□□□ 1.78
SNX13-206ENST00000474067 FKBP5Q13451 457 aaPredicted RBP26.15■■□□□ 1.78
SNX13-206ENST00000474067 RTL5Q5HYW3 569 aaPredicted RBP26.15■■□□□ 1.78
SNX13-206ENST00000474067 SCN4AP35499 1836 aa26.15■■□□□ 1.78
SNX13-206ENST00000474067 PNMA8AQ86V59 439 aaPredicted RBP26.13■■□□□ 1.77
SNX13-206ENST00000474067 HACL1Q9UJ83 578 aa26.13■■□□□ 1.77
SNX13-206ENST00000474067 LMOD1P29536 600 aaPredicted RBP26.12■■□□□ 1.77
SNX13-206ENST00000474067 RPS8P62241 208 aaKnown RBP26.11■■□□□ 1.77
SNX13-206ENST00000474067 DNAAF4Q8WXU2 420 aa26.11■■□□□ 1.77
SNX13-206ENST00000474067 EYA3Q99504 573 aa26.11■■□□□ 1.77
SNX13-206ENST00000474067 E9PSI1 815 aa26.1■■□□□ 1.77
SNX13-206ENST00000474067 ZNF541Q9H0D2 1346 aa26.1■■□□□ 1.77
SNX13-206ENST00000474067 KIAA2012Q0VF49 1180 aa26.09■■□□□ 1.77
SNX13-206ENST00000474067 LINS1Q8NG48 757 aa26.09■■□□□ 1.77
SNX13-206ENST00000474067 CDC5LQ99459 802 aaKnown RBP26.09■■□□□ 1.77
SNX13-206ENST00000474067 ZNRF3Q9ULT6 936 aa26.09■■□□□ 1.77
SNX13-206ENST00000474067 NEURL1BA8MQ27 555 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 POTECB2RU33 542 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 AOC3Q16853 763 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 CHADLQ6NUI6 762 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 LDHDQ86WU2 507 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 ZNF428Q96B54 188 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 NSFL1CQ9UNZ2 370 aaKnown RBP26.08■■□□□ 1.77
SNX13-206ENST00000474067 ZNF521Q96K83 1311 aa26.08■■□□□ 1.77
SNX13-206ENST00000474067 LRRC37AA6NMS7 1700 aa26.08■■□□□ 1.76
SNX13-206ENST00000474067 ANKRD18AQ8IVF6 992 aa26.07■■□□□ 1.76
SNX13-206ENST00000474067 CELF1Q92879 486 aaKnown RBP26.07■■□□□ 1.76
SNX13-206ENST00000474067 TAF1DQ9H5J8 278 aaPredicted RBP26.07■■□□□ 1.76
SNX13-206ENST00000474067 IGKV5-2P06315 115 aa26.06■■□□□ 1.76
SNX13-206ENST00000474067 TNIP1Q15025 636 aa26.06■■□□□ 1.76
SNX13-206ENST00000474067 G2E3Q7L622 706 aa26.06■■□□□ 1.76
SNX13-206ENST00000474067 GJA3Q9Y6H8 435 aa26.06■■□□□ 1.76
SNX13-206ENST00000474067 EPHX2P34913 555 aa26.05■■□□□ 1.76
SNX13-206ENST00000474067 CTSWP56202 376 aa26.05■■□□□ 1.76
SNX13-206ENST00000474067 WASHC4Q2M389 1173 aa26.05■■□□□ 1.76
SNX13-206ENST00000474067 GCKRQ14397 625 aa26.04■■□□□ 1.76
SNX13-206ENST00000474067 CWF19L2Q2TBE0 894 aaKnown RBP26.04■■□□□ 1.76
SNX13-206ENST00000474067 C6orf229H3BNL8 230 aa26.03■■□□□ 1.76
SNX13-206ENST00000474067 SPINK5Q9NQ38 1064 aaPredicted RBP26.03■■□□□ 1.76
SNX13-206ENST00000474067 ANKIB1Q9P2G1 1089 aa26.03■■□□□ 1.76
SNX13-206ENST00000474067 H7C1W4 665 aa26.02■■□□□ 1.76
SNX13-206ENST00000474067 EAPPQ56P03 285 aaPredicted RBP26.02■■□□□ 1.76
SNX13-206ENST00000474067 UBE3BQ7Z3V4 1068 aa26.02■■□□□ 1.76
SNX13-206ENST00000474067 PODXL2Q9NZ53 605 aa26.02■■□□□ 1.76
SNX13-206ENST00000474067 RTL9Q8NET4 1388 aa26.02■■□□□ 1.76
SNX13-206ENST00000474067 MYH3P11055 1940 aa26.02■■□□□ 1.76
SNX13-206ENST00000474067 G3V3G9 751 aa26.01■■□□□ 1.75
SNX13-206ENST00000474067 DCAF8Q5TAQ9 597 aa26.01■■□□□ 1.75
SNX13-206ENST00000474067 CIAPIN1Q6FI81 312 aa26.01■■□□□ 1.75
SNX13-206ENST00000474067 PLA2G12BQ9BX93 195 aa26.01■■□□□ 1.75
SNX13-206ENST00000474067 ZC3H12CQ9C0D7 883 aaKnown RBP26.01■■□□□ 1.75
SNX13-206ENST00000474067 CLEC11AQ9Y240 323 aa26.01■■□□□ 1.75
SNX13-206ENST00000474067 IGHMBP2P38935 993 aaKnown RBP25.99■■□□□ 1.75
SNX13-206ENST00000474067 USP50Q70EL3 339 aaPredicted RBP25.99■■□□□ 1.75
SNX13-206ENST00000474067 TTLL11Q8NHH1 800 aa25.99■■□□□ 1.75
SNX13-206ENST00000474067 GGA1Q9UJY5 639 aa25.99■■□□□ 1.75
SNX13-206ENST00000474067 TAF1P21675 1872 aa25.98■■□□□ 1.75
SNX13-206ENST00000474067 XDHP47989 1333 aa25.98■■□□□ 1.75
SNX13-206ENST00000474067 GPSM2P81274 684 aa25.98■■□□□ 1.75
SNX13-206ENST00000474067 SEC31BQ9NQW1 1179 aa25.98■■□□□ 1.75
SNX13-206ENST00000474067 CT47B1P0C2W7 299 aaPredicted RBP25.97■■□□□ 1.75
SNX13-206ENST00000474067 CXCL9Q07325 125 aa25.97■■□□□ 1.75
SNX13-206ENST00000474067 BCL2L13Q9BXK5 485 aa25.97■■□□□ 1.75
SNX13-206ENST00000474067 BSDC1Q9NW68 430 aaPredicted RBP25.97■■□□□ 1.75
SNX13-206ENST00000474067 PTPRCP08575 1304 aa25.96■■□□□ 1.75
SNX13-206ENST00000474067 ALDH1L1O75891 902 aa25.96■■□□□ 1.75
SNX13-206ENST00000474067 ATP2B4P23634 1241 aa25.96■■□□□ 1.75
SNX13-206ENST00000474067 SLFN5Q08AF3 891 aa25.96■■□□□ 1.75
SNX13-206ENST00000474067 TBC1D16Q8TBP0 767 aa25.96■■□□□ 1.75
SNX13-206ENST00000474067 JARID2Q92833 1246 aaPredicted RBP25.96■■□□□ 1.75
SNX13-206ENST00000474067 CCDC85AQ96PX6 553 aaPredicted RBP25.96■■□□□ 1.75
SNX13-206ENST00000474067 ADARB2Q9NS39 739 aaKnown RBP25.96■■□□□ 1.75
SNX13-206ENST00000474067 COL4A5P29400 1685 aa25.96■■□□□ 1.75
SNX13-206ENST00000474067 UFL1O94874 794 aa25.95■■□□□ 1.74
SNX13-206ENST00000474067 BEND3Q5T5X7 828 aa25.95■■□□□ 1.74
SNX13-206ENST00000474067 DUOX1Q9NRD9 1551 aa25.95■■□□□ 1.74
SNX13-206ENST00000474067 SCNN1DP51172 638 aa25.94■■□□□ 1.74
SNX13-206ENST00000474067 MPHOSPH8Q99549 860 aa25.94■■□□□ 1.74
SNX13-206ENST00000474067 SRCIN1Q9C0H9 1055 aa25.94■■□□□ 1.74
SNX13-206ENST00000474067 C9orf78Q9NZ63 289 aaPredicted RBP25.94■■□□□ 1.74
SNX13-206ENST00000474067 GPRC5DQ9NZD1 345 aa25.94■■□□□ 1.74
SNX13-206ENST00000474067 POLLQ9UGP5 575 aa25.94■■□□□ 1.74
SNX13-206ENST00000474067 RPS12P25398 132 aaKnown RBP25.93■■□□□ 1.74
SNX13-206ENST00000474067 ALDH1L2Q3SY69 923 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms