RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 KSR2Q6VAB6 950 aa14.73□□□□□ -0.05
CPNE1-222ENST00000473373 PI4KAP1Q8N8J0 262 aa14.73□□□□□ -0.05
CPNE1-222ENST00000473373 CCDC191Q8NCU4 936 aa14.73□□□□□ -0.05
CPNE1-222ENST00000473373 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-222ENST00000473373 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
CPNE1-222ENST00000473373 ZBTB38Q8NAP3 1195 aaPredicted RBP14.72□□□□□ -0.05
CPNE1-222ENST00000473373 C7orf43Q8WVR3 580 aa14.72□□□□□ -0.05
CPNE1-222ENST00000473373 BBOX1O75936 387 aa14.71□□□□□ -0.05
CPNE1-222ENST00000473373 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.05
CPNE1-222ENST00000473373 FLIIQ13045 1269 aa14.71□□□□□ -0.05
CPNE1-222ENST00000473373 GRAPQ13588 217 aa14.71□□□□□ -0.05
CPNE1-222ENST00000473373 SUPT20HQ8NEM7 779 aa14.71□□□□□ -0.05
CPNE1-222ENST00000473373 GRAPLQ8TC17 118 aaPredicted RBP14.71□□□□□ -0.05
CPNE1-222ENST00000473373 JARID2Q92833 1246 aaPredicted RBP14.71□□□□□ -0.05
CPNE1-222ENST00000473373 SCN4AP35499 1836 aa14.71□□□□□ -0.06
CPNE1-222ENST00000473373 PCNTO95613 3336 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 PPIP5K2O43314 1243 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 POTEIP0CG38 1075 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
CPNE1-222ENST00000473373 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
CPNE1-222ENST00000473373 DPP8Q6V1X1 898 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-222ENST00000473373 NIM1KQ8IY84 436 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 MPNDQ8N594 471 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 PSMD1Q99460 953 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
CPNE1-222ENST00000473373 ATP6V0A2Q9Y487 856 aa14.7□□□□□ -0.06
CPNE1-222ENST00000473373 VAMP4O75379 141 aa14.69□□□□□ -0.06
CPNE1-222ENST00000473373 DDNO94850 711 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-222ENST00000473373 PCCAP05165 728 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-222ENST00000473373 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
CPNE1-222ENST00000473373 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
CPNE1-222ENST00000473373 G2E3Q7L622 706 aa14.69□□□□□ -0.06
CPNE1-222ENST00000473373 TMC4Q7Z404 712 aa14.69□□□□□ -0.06
CPNE1-222ENST00000473373 CCDC85AQ96PX6 553 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-222ENST00000473373 GJA3Q9Y6H8 435 aa14.69□□□□□ -0.06
CPNE1-222ENST00000473373 PDE8AO60658 829 aa14.68□□□□□ -0.06
CPNE1-222ENST00000473373 SP8Q8IXZ3 490 aa14.68□□□□□ -0.06
CPNE1-222ENST00000473373 DNAAF4Q8WXU2 420 aa14.68□□□□□ -0.06
CPNE1-222ENST00000473373 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
CPNE1-222ENST00000473373 IQCA1LA6NCM1 817 aa14.67□□□□□ -0.06
CPNE1-222ENST00000473373 E9PSI1 815 aa14.67□□□□□ -0.06
CPNE1-222ENST00000473373 G3V3G9 751 aa14.67□□□□□ -0.06
CPNE1-222ENST00000473373 AOC3Q16853 763 aa14.67□□□□□ -0.06
CPNE1-222ENST00000473373 CWF19L2Q2TBE0 894 aaKnown RBP14.67□□□□□ -0.06
CPNE1-222ENST00000473373 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
CPNE1-222ENST00000473373 LRRC37AA6NMS7 1700 aa14.66□□□□□ -0.06
CPNE1-222ENST00000473373 C6orf229H3BNL8 230 aa14.66□□□□□ -0.06
CPNE1-222ENST00000473373 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-222ENST00000473373 SF3B3Q15393 1217 aaKnown RBP14.66□□□□□ -0.06
CPNE1-222ENST00000473373 EAPPQ56P03 285 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-222ENST00000473373 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
CPNE1-222ENST00000473373 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
CPNE1-222ENST00000473373 NSFL1CQ9UNZ2 370 aaKnown RBP14.66□□□□□ -0.06
CPNE1-222ENST00000473373 ZNF541Q9H0D2 1346 aa14.66□□□□□ -0.06
CPNE1-222ENST00000473373 NEURL1BA8MQ27 555 aa14.65□□□□□ -0.06
CPNE1-222ENST00000473373 SLC4A10Q6U841 1118 aa14.65□□□□□ -0.06
CPNE1-222ENST00000473373 ANKRD18AQ8IVF6 992 aa14.65□□□□□ -0.06
CPNE1-222ENST00000473373 CELF1Q92879 486 aaKnown RBP14.65□□□□□ -0.06
CPNE1-222ENST00000473373 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
CPNE1-222ENST00000473373 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
CPNE1-222ENST00000473373 IGKV5-2P06315 115 aa14.64□□□□□ -0.07
CPNE1-222ENST00000473373 RPS8P62241 208 aaKnown RBP14.64□□□□□ -0.07
CPNE1-222ENST00000473373 SLC51AQ86UW1 340 aa14.64□□□□□ -0.07
CPNE1-222ENST00000473373 CDC5LQ99459 802 aaKnown RBP14.64□□□□□ -0.07
CPNE1-222ENST00000473373 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
CPNE1-222ENST00000473373 CDHR2Q9BYE9 1310 aa14.64□□□□□ -0.07
CPNE1-222ENST00000473373 F6X3S4 739 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 RIMBP2O15034 1052 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 CTSWP56202 376 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 LINS1Q8NG48 757 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 EYA3Q99504 573 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 SEC31BQ9NQW1 1179 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 HACL1Q9UJ83 578 aa14.63□□□□□ -0.07
CPNE1-222ENST00000473373 FZD9O00144 591 aa14.62□□□□□ -0.07
CPNE1-222ENST00000473373 FOXN1O15353 648 aa14.62□□□□□ -0.07
CPNE1-222ENST00000473373 GCKRQ14397 625 aa14.62□□□□□ -0.07
CPNE1-222ENST00000473373 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
CPNE1-222ENST00000473373 GPC2Q8N158 579 aa14.62□□□□□ -0.07
CPNE1-222ENST00000473373 VPS33BQ9H267 617 aa14.62□□□□□ -0.07
CPNE1-222ENST00000473373 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
CPNE1-222ENST00000473373 SNED1Q8TER0 1413 aa14.61□□□□□ -0.07
CPNE1-222ENST00000473373 BCL2L13Q9BXK5 485 aa14.61□□□□□ -0.07
CPNE1-222ENST00000473373 TAF1DQ9H5J8 278 aaPredicted RBP14.61□□□□□ -0.07
CPNE1-222ENST00000473373 ZNF521Q96K83 1311 aa14.61□□□□□ -0.07
CPNE1-222ENST00000473373 UFL1O94874 794 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 EPHX2P34913 555 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 IGHMBP2P38935 993 aaKnown RBP14.6□□□□□ -0.07
CPNE1-222ENST00000473373 VEGFBP49765 207 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 GPSM2P81274 684 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 SLFN5Q08AF3 891 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 MIER1Q8N108 512 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 GGA1Q9UJY5 639 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 ZNRF3Q9ULT6 936 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 PASKQ96RG2 1323 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
CPNE1-222ENST00000473373 COL4A5P29400 1685 aa14.59□□□□□ -0.07
CPNE1-222ENST00000473373 KIAA2012Q0VF49 1180 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms