RNA–Protein interactions for RNA: ENST00000473312.5

AGAP3-211, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 1 (best) BASIC

Gene AGAP3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-211	ENST00000473312	FBXO3	Q9UK99	471 aa		32.46	■■■□□ 2.79
AGAP3-211	ENST00000473312	PLA2G12B	Q9BX93	195 aa		32.45	■■■□□ 2.79
AGAP3-211	ENST00000473312	GRPEL1	Q9HAV7	217 aa		32.45	■■■□□ 2.79
AGAP3-211	ENST00000473312	HMG20B	Q9P0W2	317 aa		32.45	■■■□□ 2.79
AGAP3-211	ENST00000473312	WDR33	Q9C0J8	1336 aa	Known RBP	32.45	■■■□□ 2.79
AGAP3-211	ENST00000473312	TSGA10IP	Q3SY00	556 aa		32.44	■■■□□ 2.78
AGAP3-211	ENST00000473312	SH2B1	Q9NRF2	756 aa	Predicted RBP	32.44	■■■□□ 2.78
AGAP3-211	ENST00000473312	PCCA	P05165	728 aa	Predicted RBP	32.44	■■■□□ 2.78
AGAP3-211	ENST00000473312	EDC3	Q96F86	508 aa	Known RBP	32.43	■■■□□ 2.78
AGAP3-211	ENST00000473312	WNK3	Q9BYP7	1800 aa		32.43	■■■□□ 2.78
AGAP3-211	ENST00000473312	ZNF609	O15014	1411 aa		32.43	■■■□□ 2.78
AGAP3-211	ENST00000473312	MAP3K15	Q6ZN16	1313 aa		32.43	■■■□□ 2.78
AGAP3-211	ENST00000473312	TAF5L	O75529	589 aa		32.43	■■■□□ 2.78
AGAP3-211	ENST00000473312	USPL1	Q5W0Q7	1092 aa		32.43	■■■□□ 2.78
AGAP3-211	ENST00000473312	EXOC5	O00471	708 aa		32.42	■■■□□ 2.78
AGAP3-211	ENST00000473312	PRPF40A	O75400	957 aa	Known RBP	32.42	■■■□□ 2.78
AGAP3-211	ENST00000473312	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	32.41	■■■□□ 2.78
AGAP3-211	ENST00000473312	PALLD	Q8WX93	1383 aa		32.41	■■■□□ 2.78
AGAP3-211	ENST00000473312	CPA1	P15085	419 aa		32.41	■■■□□ 2.78
AGAP3-211	ENST00000473312	ZNF589	Q86UQ0	364 aa	Predicted RBP	32.41	■■■□□ 2.78
AGAP3-211	ENST00000473312	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.4	■■■□□ 2.78
AGAP3-211	ENST00000473312	KBTBD3	Q8NAB2	608 aa		32.4	■■■□□ 2.78
AGAP3-211	ENST00000473312	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.39	■■■□□ 2.78
AGAP3-211	ENST00000473312	DNAJC2	Q99543	621 aa	Known RBP	32.39	■■■□□ 2.78
AGAP3-211	ENST00000473312	GAS2L3	Q86XJ1	694 aa		32.39	■■■□□ 2.78
AGAP3-211	ENST00000473312	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.39	■■■□□ 2.78
AGAP3-211	ENST00000473312	CYP19A1	P11511	503 aa	Predicted RBP	32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	LRRC24	Q50LG9	513 aa		32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	HSP90AB3P	Q58FF7	597 aa		32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	CDHR2	Q9BYE9	1310 aa		32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	ZNF445	P59923	1031 aa		32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	NEUROD6	Q96NK8	337 aa		32.38	■■■□□ 2.77
AGAP3-211	ENST00000473312	SH3TC1	Q8TE82	1336 aa		32.37	■■■□□ 2.77
AGAP3-211	ENST00000473312	CSF1R	P07333	972 aa		32.37	■■■□□ 2.77
AGAP3-211	ENST00000473312	CCDC57	Q2TAC2	916 aa		32.37	■■■□□ 2.77
AGAP3-211	ENST00000473312	MCMDC2	Q4G0Z9	681 aa		32.37	■■■□□ 2.77
AGAP3-211	ENST00000473312	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.37	■■■□□ 2.77
AGAP3-211	ENST00000473312	FOXD4L5	Q5VV16	416 aa	Predicted RBP	32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	ZNF594	Q96JF6	807 aa	Predicted RBP	32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	SMC3	Q9UQE7	1217 aa		32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	SPEF2	Q9C093	1822 aa		32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	KRT32	Q14532	448 aa		32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	ANKRD1	Q15327	319 aa		32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	ARX	Q96QS3	562 aa		32.36	■■■□□ 2.77
AGAP3-211	ENST00000473312	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	LARGE1	O95461	756 aa		32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	MBD3	O95983	291 aa		32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	BLOC1S2	Q6QNY1	142 aa		32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	GPT2	Q8TD30	523 aa		32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	SLC4A9	Q96Q91	983 aa		32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	CEP126	Q9P2H0	1117 aa		32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312		U3KPZ7	1027 aa	Predicted RBP	32.35	■■■□□ 2.77
AGAP3-211	ENST00000473312	TIMM10	P62072	90 aa		32.34	■■■□□ 2.77
AGAP3-211	ENST00000473312	PAG1	Q9NWQ8	432 aa		32.34	■■■□□ 2.77
AGAP3-211	ENST00000473312		A0A1B0GUL7	405 aa		32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	RPS6KB1	P23443	525 aa		32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	DDX46	Q7L014	1031 aa	Known RBP	32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	HELLS	Q9NRZ9	838 aa		32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	NDUFB9	Q9Y6M9	179 aa		32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	CAVIN1	Q6NZI2	390 aa	Known RBP	32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	LARP6	Q9BRS8	491 aa	Known RBP	32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	PANK2	Q9BZ23	570 aa		32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	AKAP2	Q9Y2D5	859 aa		32.33	■■■□□ 2.77
AGAP3-211	ENST00000473312	PUS3	Q9BZE2	481 aa	Known RBP	32.32	■■■□□ 2.76
AGAP3-211	ENST00000473312	THRAP3	Q9Y2W1	955 aa	Known RBP	32.32	■■■□□ 2.76
AGAP3-211	ENST00000473312	ZSCAN22	P10073	491 aa	Predicted RBP	32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	NCL	P19338	710 aa	Known RBP	32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	FAM89A	Q96GI7	184 aa		32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	STX6	O43752	255 aa		32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	ZSCAN23	Q3MJ62	389 aa		32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	NLRP10	Q86W26	655 aa		32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	CCDC83	Q8IWF9	413 aa		32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	ANKRD36C	Q5JPF3	1778 aa		32.31	■■■□□ 2.76
AGAP3-211	ENST00000473312	SYT1	P21579	422 aa		32.3	■■■□□ 2.76
AGAP3-211	ENST00000473312	ME3	Q16798	604 aa		32.3	■■■□□ 2.76
AGAP3-211	ENST00000473312	CHAMP1	Q96JM3	812 aa		32.3	■■■□□ 2.76
AGAP3-211	ENST00000473312	ERVV-1	B6SEH8	477 aa		32.29	■■■□□ 2.76
AGAP3-211	ENST00000473312	PDIA4	P13667	645 aa	Known RBP	32.29	■■■□□ 2.76
AGAP3-211	ENST00000473312	GOLIM4	O00461	696 aa		32.29	■■■□□ 2.76
AGAP3-211	ENST00000473312	IFIT1	P09914	478 aa	Known RBP	32.29	■■■□□ 2.76
AGAP3-211	ENST00000473312	HLF	Q16534	295 aa		32.29	■■■□□ 2.76
AGAP3-211	ENST00000473312	TPCN1	Q9ULQ1	816 aa		32.29	■■■□□ 2.76
AGAP3-211	ENST00000473312	NRAP	Q86VF7	1730 aa		32.28	■■■□□ 2.76
AGAP3-211	ENST00000473312	IL6ST	P40189	918 aa	Predicted RBP	32.28	■■■□□ 2.76
AGAP3-211	ENST00000473312	ST3GAL1	Q11201	340 aa		32.28	■■■□□ 2.76
AGAP3-211	ENST00000473312	IFIT5	Q13325	482 aa	Known RBP	32.28	■■■□□ 2.76
AGAP3-211	ENST00000473312	LTBP4	Q8N2S1	1624 aa		32.28	■■■□□ 2.76
AGAP3-211	ENST00000473312	ZMYM1	Q5SVZ6	1142 aa		32.27	■■■□□ 2.76
AGAP3-211	ENST00000473312	TMEM87A	Q8NBN3	555 aa		32.27	■■■□□ 2.76
AGAP3-211	ENST00000473312	ZBTB1	Q9Y2K1	713 aa		32.27	■■■□□ 2.76
AGAP3-211	ENST00000473312	DOT1L	Q8TEK3	1739 aa		32.27	■■■□□ 2.76
AGAP3-211	ENST00000473312	SPATA31A1	Q5TZJ5	1347 aa		32.27	■■■□□ 2.76
AGAP3-211	ENST00000473312	GJB2	P29033	226 aa		32.26	■■■□□ 2.76
AGAP3-211	ENST00000473312	SEC62	Q99442	399 aa	Known RBP	32.26	■■■□□ 2.76
AGAP3-211	ENST00000473312	TAF6L	Q9Y6J9	622 aa		32.26	■■■□□ 2.76
AGAP3-211	ENST00000473312	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.26	■■■□□ 2.75
AGAP3-211	ENST00000473312	ATP6V1D	Q9Y5K8	247 aa		32.26	■■■□□ 2.75
AGAP3-211	ENST00000473312	PRIM1	P49642	420 aa	Known RBP	32.25	■■■□□ 2.75

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