RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
SMC4-214ENST00000472991 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
SMC4-214ENST00000472991 SLC16A10Q8TF71 515 aa11.72□□□□□ -0.53
SMC4-214ENST00000472991 EPAS1Q99814 870 aa11.72□□□□□ -0.53
SMC4-214ENST00000472991 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
SMC4-214ENST00000472991 A0A087WZG4 1122 aa11.71□□□□□ -0.53
SMC4-214ENST00000472991 PDIA6Q15084 440 aa11.71□□□□□ -0.53
SMC4-214ENST00000472991 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.53
SMC4-214ENST00000472991 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
SMC4-214ENST00000472991 MTFR1LQ9H019 292 aa11.71□□□□□ -0.53
SMC4-214ENST00000472991 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
SMC4-214ENST00000472991 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.53
SMC4-214ENST00000472991 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.54
SMC4-214ENST00000472991 KIF13BQ9NQT8 1826 aa11.7□□□□□ -0.54
SMC4-214ENST00000472991 ZPR1O75312 459 aa11.7□□□□□ -0.54
SMC4-214ENST00000472991 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
SMC4-214ENST00000472991 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
SMC4-214ENST00000472991 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
SMC4-214ENST00000472991 ARXQ96QS3 562 aa11.7□□□□□ -0.54
SMC4-214ENST00000472991 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.541e-26■■■■■ 198.7
SMC4-214ENST00000472991 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
SMC4-214ENST00000472991 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
SMC4-214ENST00000472991 VAMP4O75379 141 aa11.69□□□□□ -0.54
SMC4-214ENST00000472991 GYS1P13807 737 aa11.69□□□□□ -0.54
SMC4-214ENST00000472991 E2F4Q16254 413 aa11.69□□□□□ -0.54
SMC4-214ENST00000472991 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
SMC4-214ENST00000472991 YTHDC1Q96MU7 727 aaKnown RBP11.69□□□□□ -0.54
SMC4-214ENST00000472991 SPON1Q9HCB6 807 aa11.69□□□□□ -0.54
SMC4-214ENST00000472991 DBF4Q9UBU7 674 aaPredicted RBP11.69□□□□□ -0.54
SMC4-214ENST00000472991 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 CAMTA2O94983 1202 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 PROX2Q3B8N5 592 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 KIF6Q6ZMV9 814 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
SMC4-214ENST00000472991 DDX12PQ92771 950 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 N4BP2Q86UW6 1770 aaPredicted RBP11.68□□□□□ -0.54
SMC4-214ENST00000472991 CACNA1SQ13698 1873 aa11.68□□□□□ -0.54
SMC4-214ENST00000472991 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
SMC4-214ENST00000472991 C6orf132Q5T0Z8 1188 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 COPS6Q7L5N1 327 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 XAGE3Q8WTP9 111 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 STK31Q9BXU1 1019 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 ZBTB3Q9H5J0 574 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 HYPKQ9NX55 129 aa11.67□□□□□ -0.54
SMC4-214ENST00000472991 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
SMC4-214ENST00000472991 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 POLD1P28340 1107 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
SMC4-214ENST00000472991 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 RABGEF1Q9UJ41 708 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 LAMB2P55268 1798 aa11.66□□□□□ -0.54
SMC4-214ENST00000472991 DLEC1Q9Y238 1755 aa11.65□□□□□ -0.54
SMC4-214ENST00000472991 MYH3P11055 1940 aa11.65□□□□□ -0.54
SMC4-214ENST00000472991 SPDYE16A6NNV3 312 aaPredicted RBP11.65□□□□□ -0.54
SMC4-214ENST00000472991 MMP10P09238 476 aa11.65□□□□□ -0.54
SMC4-214ENST00000472991 HLFQ16534 295 aa11.65□□□□□ -0.54
SMC4-214ENST00000472991 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
SMC4-214ENST00000472991 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
SMC4-214ENST00000472991 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.54
SMC4-214ENST00000472991 COL11A2P13942 1736 aaPredicted RBP11.64□□□□□ -0.55
SMC4-214ENST00000472991 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 DDR1Q08345 913 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 NFIXQ14938 502 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 TBC1D9BQ66K14 1250 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 G2E3Q7L622 706 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
SMC4-214ENST00000472991 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
SMC4-214ENST00000472991 SRCAPQ6ZRS2 3230 aa11.63□□□□□ -0.55
SMC4-214ENST00000472991 TNRC6CQ9HCJ0 1690 aaKnown RBP11.63□□□□□ -0.55
SMC4-214ENST00000472991 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
SMC4-214ENST00000472991 CLEC4GQ6UXB4 293 aa11.63□□□□□ -0.55
SMC4-214ENST00000472991 GIGYF2Q6Y7W6 1299 aaKnown RBP11.63□□□□□ -0.55
SMC4-214ENST00000472991 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
SMC4-214ENST00000472991 PPP1R1BQ9UD71 204 aaPredicted RBP11.63□□□□□ -0.55
SMC4-214ENST00000472991 GOLGA8CPA6NN73 597 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 POLRMTO00411 1230 aaKnown RBP11.62□□□□□ -0.55
SMC4-214ENST00000472991 TM4SF1P30408 202 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 PTPN5P54829 565 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 FLIIQ13045 1269 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 WNT2BQ93097 391 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 NIP7Q9Y221 180 aaKnown RBP eCLIP11.62□□□□□ -0.551e-7■■■■■ 83.2
SMC4-214ENST00000472991 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 ADCY9O60503 1353 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
SMC4-214ENST00000472991 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
SMC4-214ENST00000472991 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
SMC4-214ENST00000472991 GPTP24298 496 aa11.61□□□□□ -0.55
SMC4-214ENST00000472991 NBR1Q14596 966 aa11.61□□□□□ -0.55
SMC4-214ENST00000472991 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
SMC4-214ENST00000472991 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms