RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 FBXO3Q9UK99 471 aa20.08■□□□□ 0.81
PCOLCE-205ENST00000472348 SYT17Q9BSW7 474 aa20.07■□□□□ 0.8
PCOLCE-205ENST00000472348 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
PCOLCE-205ENST00000472348 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
PCOLCE-205ENST00000472348 BRCA1P38398 1863 aaKnown RBP20.06■□□□□ 0.8
PCOLCE-205ENST00000472348 ATP8B2P98198 1209 aa20.06■□□□□ 0.8
PCOLCE-205ENST00000472348 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
PCOLCE-205ENST00000472348 ANKRD44Q8N8A2 993 aa20.06■□□□□ 0.8
PCOLCE-205ENST00000472348 BICC1Q9H694 974 aaKnown RBP20.06■□□□□ 0.8
PCOLCE-205ENST00000472348 COL11A2P13942 1736 aaPredicted RBP20.05■□□□□ 0.8
PCOLCE-205ENST00000472348 HCLS1P14317 486 aaPredicted RBP20.05■□□□□ 0.8
PCOLCE-205ENST00000472348 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
PCOLCE-205ENST00000472348 CRAMP1Q96RY5 1269 aa20.05■□□□□ 0.8
PCOLCE-205ENST00000472348 HMMRO75330 724 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 SRGNP10124 158 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 NPR1P16066 1061 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 EPHA10Q5JZY3 1008 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 STYK1Q6J9G0 422 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 CEP85Q6P2H3 762 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 LMBR1LQ6UX01 489 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 TMC4Q7Z404 712 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 SSH3Q8TE77 659 aa20.04■□□□□ 0.8
PCOLCE-205ENST00000472348 H0YIN7 160 aa20.03■□□□□ 0.8
PCOLCE-205ENST00000472348 ALDH1B1P30837 517 aa20.03■□□□□ 0.8
PCOLCE-205ENST00000472348 POLA2Q14181 598 aa20.03■□□□□ 0.8
PCOLCE-205ENST00000472348 RTL5Q5HYW3 569 aaPredicted RBP20.03■□□□□ 0.8
PCOLCE-205ENST00000472348 MASTLQ96GX5 879 aa20.03■□□□□ 0.8
PCOLCE-205ENST00000472348 CDC5LQ99459 802 aaKnown RBP20.02■□□□□ 0.8
PCOLCE-205ENST00000472348 COPRSQ9NQ92 184 aa20.02■□□□□ 0.8
PCOLCE-205ENST00000472348 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
PCOLCE-205ENST00000472348 HDAC1Q13547 482 aaPredicted RBP20.01■□□□□ 0.79
PCOLCE-205ENST00000472348 CCDC57Q2TAC2 916 aa20.01■□□□□ 0.79
PCOLCE-205ENST00000472348 DDX46Q7L014 1031 aaKnown RBP20.01■□□□□ 0.79
PCOLCE-205ENST00000472348 JARID2Q92833 1246 aaPredicted RBP20.01■□□□□ 0.79
PCOLCE-205ENST00000472348 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
PCOLCE-205ENST00000472348 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
PCOLCE-205ENST00000472348 BBOX1O75936 387 aa20■□□□□ 0.79
PCOLCE-205ENST00000472348 RPGRQ92834 1020 aaKnown RBP20■□□□□ 0.79
PCOLCE-205ENST00000472348 LRRC37AA6NMS7 1700 aa19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 ITGA6P23229 1130 aa19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 RFX5P48382 616 aaPredicted RBP19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 NLGN2Q8NFZ4 835 aa19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 CNKSR1Q969H4 720 aa19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 GREM2Q9H772 168 aa19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
PCOLCE-205ENST00000472348 GRAPQ13588 217 aa19.98■□□□□ 0.79
PCOLCE-205ENST00000472348 GRIPAP1Q4V328 841 aa19.98■□□□□ 0.79
PCOLCE-205ENST00000472348 C3orf67Q6ZVT6 689 aa19.98■□□□□ 0.79
PCOLCE-205ENST00000472348 C2CD5Q86YS7 1000 aa19.98■□□□□ 0.79
PCOLCE-205ENST00000472348 GRAPLQ8TC17 118 aaPredicted RBP19.98■□□□□ 0.79
PCOLCE-205ENST00000472348 PCDHB15Q9Y5E8 787 aa19.98■□□□□ 0.79
PCOLCE-205ENST00000472348 ARFGEF1Q9Y6D6 1849 aa19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 CIAO1O76071 339 aa19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 PTPN12Q05209 780 aaKnown RBP19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 FAM161AQ3B820 660 aa19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 HSP90AB4PQ58FF6 505 aa19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 SIRT2Q8IXJ6 389 aa19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 BSDC1Q9NW68 430 aaPredicted RBP19.97■□□□□ 0.79
PCOLCE-205ENST00000472348 PNMA6EA0A0J9YXQ4 647 aa19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 RPS8P62241 208 aaKnown RBP19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 CC2D2BQ6DHV5 1058 aa19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 CCDC24Q8N4L8 307 aa19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 RWDD1Q9H446 243 aaPredicted RBP19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 TAF1P21675 1872 aa19.96■□□□□ 0.79
PCOLCE-205ENST00000472348 KCNA3P22001 575 aa19.95■□□□□ 0.78
PCOLCE-205ENST00000472348 IGHMBP2P38935 993 aaKnown RBP19.95■□□□□ 0.78
PCOLCE-205ENST00000472348 IRX6P78412 446 aaPredicted RBP19.95■□□□□ 0.78
PCOLCE-205ENST00000472348 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
PCOLCE-205ENST00000472348 A0A1B0GUL6 1792 aa19.95■□□□□ 0.78
PCOLCE-205ENST00000472348 GCC1Q96CN9 775 aa19.94■□□□□ 0.78
PCOLCE-205ENST00000472348 DCTPP1Q9H773 170 aa19.94■□□□□ 0.78
PCOLCE-205ENST00000472348 PIM2Q9P1W9 311 aa19.94■□□□□ 0.78
PCOLCE-205ENST00000472348 SPEF2Q9C093 1822 aa19.94■□□□□ 0.78
PCOLCE-205ENST00000472348 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
PCOLCE-205ENST00000472348 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
PCOLCE-205ENST00000472348 TTLL6Q8N841 843 aa19.93■□□□□ 0.78
PCOLCE-205ENST00000472348 MPHOSPH8Q99549 860 aa19.93■□□□□ 0.78
PCOLCE-205ENST00000472348 SEC31BQ9NQW1 1179 aa19.93■□□□□ 0.78
PCOLCE-205ENST00000472348 CHMP3Q9Y3E7 222 aa19.93■□□□□ 0.78
PCOLCE-205ENST00000472348 SLX4Q8IY92 1834 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 EYA2O00167 538 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 RAB11FIP3O75154 756 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 DPEP1P16444 411 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 IL15P40933 162 aaPredicted RBP19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 SOGA3Q5TF21 947 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 ERC1Q8IUD2 1116 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 SP8Q8IXZ3 490 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 PELP1Q8IZL8 1130 aaKnown RBP19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 MROH5Q6ZUA9 1318 aa19.92■□□□□ 0.78
PCOLCE-205ENST00000472348 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
PCOLCE-205ENST00000472348 LDHAL6AQ6ZMR3 332 aa19.91■□□□□ 0.78
PCOLCE-205ENST00000472348 CELF1Q92879 486 aaKnown RBP19.91■□□□□ 0.78
PCOLCE-205ENST00000472348 PPP4R2Q9NY27 417 aa19.91■□□□□ 0.78
PCOLCE-205ENST00000472348 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
PCOLCE-205ENST00000472348 RIPOR2Q9Y4F9 1068 aa19.91■□□□□ 0.78
PCOLCE-205ENST00000472348 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
PCOLCE-205ENST00000472348 CHRNA5P30532 468 aa19.9■□□□□ 0.78
PCOLCE-205ENST00000472348 SMC5Q8IY18 1101 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms