RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 CCDC85AQ96PX6 553 aaPredicted RBP16.08■□□□□ 0.16
PPP1R3F-204ENST00000471261 PDE8AO60658 829 aa16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 CCDC152Q4G0S7 254 aa16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 CELF1Q92879 486 aaKnown RBP16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 DDX60Q8IY21 1712 aaKnown RBP16.07■□□□□ 0.16
PPP1R3F-204ENST00000471261 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 LAMB2P55268 1798 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 GCKRQ14397 625 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 LARGE2Q8N3Y3 721 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
PPP1R3F-204ENST00000471261 SNED1Q8TER0 1413 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 CDHR2Q9BYE9 1310 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 DDNO94850 711 aaPredicted RBP16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 SLC4A10Q6U841 1118 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 TMC4Q7Z404 712 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 MPNDQ8N594 471 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
PPP1R3F-204ENST00000471261 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
PPP1R3F-204ENST00000471261 TOMM70O94826 608 aa16.04■□□□□ 0.16
PPP1R3F-204ENST00000471261 CTSWP56202 376 aa16.04■□□□□ 0.16
PPP1R3F-204ENST00000471261 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
PPP1R3F-204ENST00000471261 AOC3Q16853 763 aa16.04■□□□□ 0.16
PPP1R3F-204ENST00000471261 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
PPP1R3F-204ENST00000471261 ZNF541Q9H0D2 1346 aa16.03■□□□□ 0.16
PPP1R3F-204ENST00000471261 H7C1W4 665 aa16.03■□□□□ 0.16
PPP1R3F-204ENST00000471261 VEGFAP15692 232 aaPredicted RBP16.03■□□□□ 0.16
PPP1R3F-204ENST00000471261 MRPL50Q8N5N7 158 aaKnown RBP16.03■□□□□ 0.16
PPP1R3F-204ENST00000471261 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
PPP1R3F-204ENST00000471261 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
PPP1R3F-204ENST00000471261 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
PPP1R3F-204ENST00000471261 BEND3Q5T5X7 828 aa16.02■□□□□ 0.16
PPP1R3F-204ENST00000471261 NIM1KQ8IY84 436 aa16.02■□□□□ 0.16
PPP1R3F-204ENST00000471261 TAF1P21675 1872 aa16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 FZD9O00144 591 aa16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 EIF6P56537 245 aaKnown RBP16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 RTFDC1Q9BY42 306 aaPredicted RBP16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 GREM2Q9H772 168 aa16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 SMC4Q9NTJ3 1288 aa16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 DICER1Q9UPY3 1922 aaKnown RBP16.01■□□□□ 0.15
PPP1R3F-204ENST00000471261 CACNA1FO60840 1977 aa16■□□□□ 0.15
PPP1R3F-204ENST00000471261 C6orf229H3BNL8 230 aa16■□□□□ 0.15
PPP1R3F-204ENST00000471261 GPSM2P81274 684 aa16■□□□□ 0.15
PPP1R3F-204ENST00000471261 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
PPP1R3F-204ENST00000471261 CDC5LQ99459 802 aaKnown RBP16■□□□□ 0.15
PPP1R3F-204ENST00000471261 SRCIN1Q9C0H9 1055 aa16■□□□□ 0.15
PPP1R3F-204ENST00000471261 ANKIB1Q9P2G1 1089 aa16■□□□□ 0.15
PPP1R3F-204ENST00000471261 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
PPP1R3F-204ENST00000471261 COL4A1P02462 1669 aa15.99■□□□□ 0.15
PPP1R3F-204ENST00000471261 POTECB2RU33 542 aa15.99■□□□□ 0.15
PPP1R3F-204ENST00000471261 CASP7P55210 303 aa15.99■□□□□ 0.15
PPP1R3F-204ENST00000471261 VPS33BQ9H267 617 aa15.99■□□□□ 0.15
PPP1R3F-204ENST00000471261 C9orf78Q9NZ63 289 aaPredicted RBP15.99■□□□□ 0.15
PPP1R3F-204ENST00000471261 COL4A5P29400 1685 aa15.99■□□□□ 0.15
PPP1R3F-204ENST00000471261 PTPRCP08575 1304 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 KIAA2012Q0VF49 1180 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 WASHC4Q2M389 1173 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 ALDH1L2Q3SY69 923 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 GPC2Q8N158 579 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
PPP1R3F-204ENST00000471261 GRM8O00222 908 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 RIMBP2O15034 1052 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 ITGA6P23229 1130 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 L3MBTL3Q96JM7 780 aaPredicted RBP15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 ZNRF3Q9ULT6 936 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 CHMP3Q9Y3E7 222 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
PPP1R3F-204ENST00000471261 UFL1O94874 794 aa15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 HSPA6P17066 643 aa15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 IGHMBP2P38935 993 aaKnown RBP15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 SMC1BQ8NDV3 1235 aa15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 GPR101Q96P66 508 aaPredicted RBP15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 EYA3Q99504 573 aa15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 WDR90Q96KV7 1748 aa15.96■□□□□ 0.15
PPP1R3F-204ENST00000471261 FSTL1Q12841 308 aa15.95■□□□□ 0.14
PPP1R3F-204ENST00000471261 EAPPQ56P03 285 aaPredicted RBP15.95■□□□□ 0.14
PPP1R3F-204ENST00000471261 BSDC1Q9NW68 430 aaPredicted RBP15.95■□□□□ 0.14
PPP1R3F-204ENST00000471261 HACL1Q9UJ83 578 aa15.95■□□□□ 0.14
PPP1R3F-204ENST00000471261 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
PPP1R3F-204ENST00000471261 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
PPP1R3F-204ENST00000471261 LRRC37AA6NMS7 1700 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 RAD17O75943 681 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 CSF1RP07333 972 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 LMOD1P29536 600 aaPredicted RBP15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 FOXO4P98177 505 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms