RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LTBP1Q14766 1721 aa25.03■■□□□ 1.6
HDAC7-220ENST00000471235 RASSF7Q02833 373 aa25.03■■□□□ 1.6
HDAC7-220ENST00000471235 DDX46Q7L014 1031 aaKnown RBP25.03■■□□□ 1.6
HDAC7-220ENST00000471235 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
HDAC7-220ENST00000471235 API5Q9BZZ5 524 aaKnown RBP25.03■■□□□ 1.6
HDAC7-220ENST00000471235 PPEF1O14829 653 aaPredicted RBP25.02■■□□□ 1.6
HDAC7-220ENST00000471235 CTSWP56202 376 aa25.02■■□□□ 1.6
HDAC7-220ENST00000471235 OLFM4Q6UX06 510 aa25.02■■□□□ 1.6
HDAC7-220ENST00000471235 SLC51AQ86UW1 340 aa25.02■■□□□ 1.6
HDAC7-220ENST00000471235 NFKBIEO00221 500 aa25.01■■□□□ 1.59
HDAC7-220ENST00000471235 GRM8O00222 908 aa25.01■■□□□ 1.59
HDAC7-220ENST00000471235 GRAPQ13588 217 aa25.01■■□□□ 1.59
HDAC7-220ENST00000471235 SOGA3Q5TF21 947 aa25.01■■□□□ 1.59
HDAC7-220ENST00000471235 GRAPLQ8TC17 118 aaPredicted RBP25.01■■□□□ 1.59
HDAC7-220ENST00000471235 CCDC93Q567U6 631 aa25■■□□□ 1.59
HDAC7-220ENST00000471235 ARHGAP45Q92619 1136 aa25■■□□□ 1.59
HDAC7-220ENST00000471235 PLA2G12BQ9BX93 195 aa25■■□□□ 1.59
HDAC7-220ENST00000471235 CCDC152Q4G0S7 254 aa24.99■■□□□ 1.59
HDAC7-220ENST00000471235 DUOX1Q9NRD9 1551 aa24.98■■□□□ 1.59
HDAC7-220ENST00000471235 RTL9Q8NET4 1388 aa24.98■■□□□ 1.59
HDAC7-220ENST00000471235 YY1P25490 414 aa24.98■■□□□ 1.59
HDAC7-220ENST00000471235 FRAT1Q92837 279 aaPredicted RBP24.98■■□□□ 1.59
HDAC7-220ENST00000471235 CELF1Q92879 486 aaKnown RBP24.98■■□□□ 1.59
HDAC7-220ENST00000471235 CCDC85AQ96PX6 553 aaPredicted RBP24.98■■□□□ 1.59
HDAC7-220ENST00000471235 C9orf78Q9NZ63 289 aaPredicted RBP24.98■■□□□ 1.59
HDAC7-220ENST00000471235 UTYO14607 1347 aa24.97■■□□□ 1.59
HDAC7-220ENST00000471235 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
HDAC7-220ENST00000471235 TTLL11Q8NHH1 800 aa24.97■■□□□ 1.59
HDAC7-220ENST00000471235 SEC31BQ9NQW1 1179 aa24.97■■□□□ 1.59
HDAC7-220ENST00000471235 TNNQ9UQP3 1299 aa24.97■■□□□ 1.59
HDAC7-220ENST00000471235 TRIM27P14373 513 aa24.96■■□□□ 1.59
HDAC7-220ENST00000471235 CCT4P50991 539 aaKnown RBP24.96■■□□□ 1.59
HDAC7-220ENST00000471235 PRELPP51888 382 aa24.96■■□□□ 1.59
HDAC7-220ENST00000471235 ATF7IPQ6VMQ6 1270 aa24.96■■□□□ 1.59
HDAC7-220ENST00000471235 ATP6V0A2Q9Y487 856 aa24.96■■□□□ 1.59
HDAC7-220ENST00000471235 IPO8O15397 1037 aaKnown RBP24.95■■□□□ 1.58
HDAC7-220ENST00000471235 BBOX1O75936 387 aa24.95■■□□□ 1.58
HDAC7-220ENST00000471235 NBPF7P0C2Y1 421 aaPredicted RBP24.95■■□□□ 1.58
HDAC7-220ENST00000471235 TAOK3Q9H2K8 898 aa24.95■■□□□ 1.58
HDAC7-220ENST00000471235 GREM2Q9H772 168 aa24.95■■□□□ 1.58
HDAC7-220ENST00000471235 FOXO4P98177 505 aa24.94■■□□□ 1.58
HDAC7-220ENST00000471235 CC2D2BQ6DHV5 1058 aa24.94■■□□□ 1.58
HDAC7-220ENST00000471235 FAM161AQ3B820 660 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 EPHA10Q5JZY3 1008 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 C9orf131Q5VYM1 1079 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 ZKSCAN2Q63HK3 967 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 RTKN2Q8IZC4 609 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 SUCLG2Q96I99 432 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 RNF181Q9P0P0 153 aa24.93■■□□□ 1.58
HDAC7-220ENST00000471235 CSF1RP07333 972 aa24.92■■□□□ 1.58
HDAC7-220ENST00000471235 LMNB1P20700 586 aa24.92■■□□□ 1.58
HDAC7-220ENST00000471235 FKBP4Q02790 459 aaKnown RBP eCLIP24.92■■□□□ 1.58
HDAC7-220ENST00000471235 TMC4Q7Z404 712 aa24.92■■□□□ 1.58
HDAC7-220ENST00000471235 SP8Q8IXZ3 490 aa24.92■■□□□ 1.58
HDAC7-220ENST00000471235 USP44Q9H0E7 712 aa24.92■■□□□ 1.58
HDAC7-220ENST00000471235 INTS3Q68E01 1043 aaKnown RBP24.91■■□□□ 1.58
HDAC7-220ENST00000471235 KAZALD1Q96I82 304 aa24.91■■□□□ 1.58
HDAC7-220ENST00000471235 RPS8P62241 208 aaKnown RBP24.9■■□□□ 1.58
HDAC7-220ENST00000471235 CLUAP1Q96AJ1 413 aa24.9■■□□□ 1.58
HDAC7-220ENST00000471235 RCAN3Q9UKA8 241 aa24.9■■□□□ 1.58
HDAC7-220ENST00000471235 COL4A5P29400 1685 aa24.9■■□□□ 1.58
HDAC7-220ENST00000471235 GRIPAP1Q4V328 841 aa24.89■■□□□ 1.58
HDAC7-220ENST00000471235 ANKRD18AQ8IVF6 992 aa24.89■■□□□ 1.58
HDAC7-220ENST00000471235 CDC5LQ99459 802 aaKnown RBP24.89■■□□□ 1.58
HDAC7-220ENST00000471235 PSMD1Q99460 953 aa24.89■■□□□ 1.58
HDAC7-220ENST00000471235 ITGA6P23229 1130 aa24.88■■□□□ 1.57
HDAC7-220ENST00000471235 LMBR1LQ6UX01 489 aa24.88■■□□□ 1.57
HDAC7-220ENST00000471235 TMX4Q9H1E5 349 aaPredicted RBP24.88■■□□□ 1.57
HDAC7-220ENST00000471235 ZNF277Q9NRM2 450 aaPredicted RBP24.88■■□□□ 1.57
HDAC7-220ENST00000471235 CHMP3Q9Y3E7 222 aa24.87■■□□□ 1.57
HDAC7-220ENST00000471235 ANKRD44Q8N8A2 993 aa24.86■■□□□ 1.57
HDAC7-220ENST00000471235 BICC1Q9H694 974 aaKnown RBP24.86■■□□□ 1.57
HDAC7-220ENST00000471235 RABL6Q3YEC7 729 aaPredicted RBP24.85■■□□□ 1.57
HDAC7-220ENST00000471235 DPP8Q6V1X1 898 aaPredicted RBP24.85■■□□□ 1.57
HDAC7-220ENST00000471235 MPNDQ8N594 471 aa24.85■■□□□ 1.57
HDAC7-220ENST00000471235 TMEM57Q8N5G2 664 aa24.85■■□□□ 1.57
HDAC7-220ENST00000471235 MEIS3Q99687 375 aa24.85■■□□□ 1.57
HDAC7-220ENST00000471235 ANKRD18BA2A2Z9 1011 aa24.84■■□□□ 1.57
HDAC7-220ENST00000471235 UBTFL1P0CB47 393 aaPredicted RBP24.84■■□□□ 1.57
HDAC7-220ENST00000471235 IARSP41252 1262 aaKnown RBP24.84■■□□□ 1.57
HDAC7-220ENST00000471235 RTFDC1Q9BY42 306 aaPredicted RBP24.84■■□□□ 1.57
HDAC7-220ENST00000471235 PSME4Q14997 1843 aa24.84■■□□□ 1.57
HDAC7-220ENST00000471235 ZC3H4Q9UPT8 1303 aaKnown RBP24.84■■□□□ 1.57
HDAC7-220ENST00000471235 RLBP1P12271 317 aa24.83■■□□□ 1.57
HDAC7-220ENST00000471235 GPSM2P81274 684 aa24.83■■□□□ 1.57
HDAC7-220ENST00000471235 FTSJ3Q8IY81 847 aaKnown RBP24.83■■□□□ 1.57
HDAC7-220ENST00000471235 DZIP1LQ8IYY4 767 aaKnown RBP24.83■■□□□ 1.57
HDAC7-220ENST00000471235 IGHMBP2P38935 993 aaKnown RBP24.82■■□□□ 1.56
HDAC7-220ENST00000471235 IFIT5Q13325 482 aaKnown RBP24.82■■□□□ 1.56
HDAC7-220ENST00000471235 ZNF784Q8NCA9 323 aaPredicted RBP24.81■■□□□ 1.56
HDAC7-220ENST00000471235 SUPT20HQ8NEM7 779 aa24.81■■□□□ 1.56
HDAC7-220ENST00000471235 BSDC1Q9NW68 430 aaPredicted RBP24.81■■□□□ 1.56
HDAC7-220ENST00000471235 CCDC57Q2TAC2 916 aa24.8■■□□□ 1.56
HDAC7-220ENST00000471235 NSFL1CQ9UNZ2 370 aaKnown RBP24.8■■□□□ 1.56
HDAC7-220ENST00000471235 WDR90Q96KV7 1748 aa24.8■■□□□ 1.56
HDAC7-220ENST00000471235 ZNF594Q96JF6 807 aaPredicted RBP24.79■■□□□ 1.56
HDAC7-220ENST00000471235 PODXL2Q9NZ53 605 aa24.79■■□□□ 1.56
HDAC7-220ENST00000471235 LRRFIP2Q9Y608 721 aaKnown RBP24.79■■□□□ 1.56
HDAC7-220ENST00000471235 SCN9AQ15858 1988 aa24.79■■□□□ 1.56
HDAC7-220ENST00000471235 ZNF646O15015 1829 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms