RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 TMTC2Q8N394 836 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 CCDC178Q5BJE1 867 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 CCDC102BQ68D86 513 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 ESYT1Q9BSJ8 1104 aa18.17■□□□□ 0.5
BRAT1-204ENST00000469750 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 ESR2Q92731 530 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
BRAT1-204ENST00000469750 ZBTB43O43298 467 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 C19orf44Q9H6X5 657 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 EIF2AK4Q9P2K8 1649 aaKnown RBP18.16■□□□□ 0.5
BRAT1-204ENST00000469750 NEMFO60524 1076 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 USO1O60763 962 aaKnown RBP18.16■□□□□ 0.5
BRAT1-204ENST00000469750 ANAPC15P60006 121 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
BRAT1-204ENST00000469750 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
BRAT1-204ENST00000469750 SLC4A4Q9Y6R1 1079 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 PANK2Q9BZ23 570 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 MAPKBP1O60336 1514 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
BRAT1-204ENST00000469750 CETN1Q12798 172 aa18.16■□□□□ 0.5
BRAT1-204ENST00000469750 MYO1BO43795 1136 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 CPLX3Q8WVH0 158 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 GBP2P32456 591 aaPredicted RBP18.15■□□□□ 0.5
BRAT1-204ENST00000469750 GSDMDP57764 484 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 UTP14AQ9BVJ6 771 aaKnown RBP18.15■□□□□ 0.5
BRAT1-204ENST00000469750 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 CASQ1P31415 396 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 CCDC150Q8NCX0 1101 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 URI1O94763 535 aaPredicted RBP18.15■□□□□ 0.5
BRAT1-204ENST00000469750 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
BRAT1-204ENST00000469750 CRACR2AQ9BSW2 395 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 ABCC1P33527 1531 aa18.15■□□□□ 0.5
BRAT1-204ENST00000469750 MAP3K5Q99683 1374 aa18.14■□□□□ 0.5
BRAT1-204ENST00000469750 ZFYVE9O95405 1425 aa18.14■□□□□ 0.5
BRAT1-204ENST00000469750 GOLGA6L7A0A1B0GV03 622 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 CAVIN2O95810 425 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 TSPY3P0CV98 308 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 TSPY8P0CW00 308 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 ZSCAN22P10073 491 aaPredicted RBP18.14■□□□□ 0.49
BRAT1-204ENST00000469750 CCDC40Q4G0X9 1142 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 STXBP4Q6ZWJ1 553 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 NFATC2IPQ8NCF5 419 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 TMCO3Q6UWJ1 677 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 NECAB1Q8N987 351 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 LRRC27Q9C0I9 530 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
BRAT1-204ENST00000469750 USP8P40818 1118 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 ZNF165P49910 485 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 NAA16Q6N069 864 aaPredicted RBP18.14■□□□□ 0.49
BRAT1-204ENST00000469750 FAM114A1Q8IWE2 563 aa18.14■□□□□ 0.49
BRAT1-204ENST00000469750 IFIT1BQ5T764 474 aaKnown RBP18.13■□□□□ 0.49
BRAT1-204ENST00000469750 SLC9C2Q5TAH2 1124 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 TESK2Q96S53 571 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 BMP15O95972 392 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 DZIP3Q86Y13 1208 aaKnown RBP18.13■□□□□ 0.49
BRAT1-204ENST00000469750 VAMP4O75379 141 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
BRAT1-204ENST00000469750 PPP4R3BQ5MIZ7 849 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 TCERG1LQ5VWI1 586 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 PDCL2Q8N4E4 241 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 SIRT1Q96EB6 747 aa18.13■□□□□ 0.49
BRAT1-204ENST00000469750 GCP02774 474 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 RTN1Q16799 776 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 DCAF5Q96JK2 942 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 EYA1Q99502 592 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 KLHL40Q2TBA0 621 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 TMC6Q7Z403 805 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 ALG1Q9BT22 464 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 LRRC2Q9BYS8 371 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 NYXQ9GZU5 481 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
BRAT1-204ENST00000469750 TTC41PQ6P2S7 1318 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
BRAT1-204ENST00000469750 TRPM2O94759 1503 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 GNAQP50148 359 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
BRAT1-204ENST00000469750 PAFAH1B1P43034 410 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 TRAF1Q13077 416 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 LUZP1Q86V48 1076 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.11■□□□□ 0.49
BRAT1-204ENST00000469750 LIG1P18858 919 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 MAP9Q49MG5 647 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
BRAT1-204ENST00000469750 SAMM50Q9Y512 469 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 KIAA0556O60303 1618 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 A0A1W2PP64 1363 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 SYKP43405 635 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 TSPYL6Q8N831 410 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 ZNF804AQ7Z570 1209 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 KIF21AQ7Z4S6 1674 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 MCM3P25205 808 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 NMIQ13287 307 aaPredicted RBP18.1■□□□□ 0.49
BRAT1-204ENST00000469750 KCNG4Q8TDN1 519 aa18.1■□□□□ 0.49
BRAT1-204ENST00000469750 HDAC9Q9UKV0 1011 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms