RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 PKD2L1Q9P0L9 805 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 PIK3R4Q99570 1358 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 TMCO5BA8MYB1 307 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 UBA7P41226 1012 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 BAG6P46379 1132 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 TEX14Q8IWB6 1497 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 MAP3K11Q16584 847 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
CD46-212ENST00000469535 SAP30BPQ9UHR5 308 aaKnown RBP8.11□□□□□ -1.11
CD46-212ENST00000469535 USP21Q9UK80 565 aa8.11□□□□□ -1.11
CD46-212ENST00000469535 NAPAP54920 295 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 FANCIQ9NVI1 1328 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 ERLIN1O75477 346 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 ISM2Q6H9L7 571 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 LUZP1Q86V48 1076 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 MIGA1Q8NAN2 632 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 ZYXQ15942 572 aaKnown RBP8.1□□□□□ -1.11
CD46-212ENST00000469535 MSL1Q68DK7 614 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 CWC15Q9P013 229 aaKnown RBP8.1□□□□□ -1.11
CD46-212ENST00000469535 BACH1O14867 736 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 KIAA0754O94854 1291 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 UFL1O94874 794 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 SPOUT1Q5T280 376 aaKnown RBP8.1□□□□□ -1.11
CD46-212ENST00000469535 LARGE2Q8N3Y3 721 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 ECHDC1Q9NTX5 307 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 GOLGA6L7A0A1B0GV03 622 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 SPDYE3A6NKU9 549 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 IRS4O14654 1257 aaPredicted RBP8.1□□□□□ -1.11
CD46-212ENST00000469535 NOP2P46087 812 aaKnown RBP8.1□□□□□ -1.11
CD46-212ENST00000469535 ALDH1L2Q3SY69 923 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 MCM9Q9NXL9 1143 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 PTPRCP08575 1304 aa8.1□□□□□ -1.11
CD46-212ENST00000469535 H0YIN7 160 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 STAMBPO95630 424 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 SLFN5Q08AF3 891 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
CD46-212ENST00000469535 EXOC1Q9NV70 894 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 BCS1LQ9Y276 419 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 BIN1O00499 593 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 LDHBP07195 334 aaKnown RBP8.09□□□□□ -1.11
CD46-212ENST00000469535 TCIRG1Q13488 830 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 CCDC102AQ96A19 550 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 C19orf44Q9H6X5 657 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.11
CD46-212ENST00000469535 CUL7Q14999 1698 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 WDR97A6NE52 1622 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 SBNO2Q9Y2G9 1366 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 TRAF1Q13077 416 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 LMBR1LQ6UX01 489 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 GJC1P36383 396 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 CCDC117Q8IWD4 279 aaPredicted RBP8.09□□□□□ -1.11
CD46-212ENST00000469535 CCDC24Q8N4L8 307 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 TSNARE1Q96NA8 513 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 ORC3Q9UBD5 711 aaPredicted RBP8.09□□□□□ -1.11
CD46-212ENST00000469535 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 KRT23Q9C075 422 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 C6orf50Q9HD87 102 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 ESR2Q92731 530 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 MBIPQ9NS73 344 aa8.09□□□□□ -1.11
CD46-212ENST00000469535 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.12
CD46-212ENST00000469535 IFFO1Q0D2I5 559 aa8.09□□□□□ -1.12
CD46-212ENST00000469535 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.12
CD46-212ENST00000469535 FSIP1Q8NA03 581 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 LRRC45Q96CN5 670 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 GINS2Q9Y248 185 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 UHRF1BP1LA0JNW5 1464 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 KRT13P13646 458 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 ACTN2P35609 894 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 SLC9C2Q5TAH2 1124 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 MAGEB6Q8N7X4 407 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 TOP1P11387 765 aaKnown RBP8.08□□□□□ -1.12
CD46-212ENST00000469535 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 LRRC2Q9BYS8 371 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 ARHGAP27Q6ZUM4 889 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 NEK1Q96PY6 1258 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 CCDC87Q9NVE4 849 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 LPXNO60711 386 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 IMPG2Q9BZV3 1241 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 GOLGA6L10A0A0M3HER8 536 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 KLF18A0A0U1RQI7 1052 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 USO1O60763 962 aaKnown RBP8.08□□□□□ -1.12
CD46-212ENST00000469535 HARSP12081 509 aaKnown RBP8.08□□□□□ -1.12
CD46-212ENST00000469535 ANKRD2Q9GZV1 360 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 SH2B1Q9NRF2 756 aaPredicted RBP8.08□□□□□ -1.12
CD46-212ENST00000469535 ANO10Q9NW15 660 aa8.08□□□□□ -1.12
CD46-212ENST00000469535 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
CD46-212ENST00000469535 TBC1D5Q92609 795 aa8.07□□□□□ -1.12
CD46-212ENST00000469535 YEATS4O95619 227 aa8.07□□□□□ -1.12
CD46-212ENST00000469535 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
CD46-212ENST00000469535 RRP36Q96EU6 259 aaKnown RBP8.07□□□□□ -1.12
CD46-212ENST00000469535 LRRC27Q9C0I9 530 aa8.07□□□□□ -1.12
CD46-212ENST00000469535 ABCC11Q96J66 1382 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms