RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 USP17L18D6R9N7 530 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 USP17L22D6RA61 530 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 USP17L17D6RBQ6 530 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 USP17L19D6RCP7 530 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 USP17L20D6RJB6 530 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 SUPT5HO00267 1087 aaKnown RBP6.32□□□□□ -1.4
TPR-204ENST00000469463 INPP5BP32019 993 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 IDH3AP50213 366 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 GPLD1P80108 840 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 USP17L24Q0WX57 530 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 DHX32Q7L7V1 743 aaKnown RBP6.32□□□□□ -1.4
TPR-204ENST00000469463 FBXO11Q86XK2 927 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 TRPM4Q8TD43 1214 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 LPIN3Q9BQK8 851 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 SSBP4Q9BWG4 385 aaPredicted RBP6.32□□□□□ -1.4
TPR-204ENST00000469463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.4
TPR-204ENST00000469463 BCS1LQ9Y276 419 aa6.32□□□□□ -1.4
TPR-204ENST00000469463 CPB1P15086 417 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
TPR-204ENST00000469463 ELMSAN1Q6PJG2 1045 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 ARID3AQ99856 593 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 PPP1R12CQ9BZL4 782 aa6.31□□□□□ -1.4
TPR-204ENST00000469463 RARAP10276 462 aa6.3□□□□□ -1.4
TPR-204ENST00000469463 NRLP54845 237 aa6.3□□□□□ -1.4
TPR-204ENST00000469463 KANK4Q5T7N3 995 aaPredicted RBP6.3□□□□□ -1.4
TPR-204ENST00000469463 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
TPR-204ENST00000469463 DCAF11Q8TEB1 546 aa6.3□□□□□ -1.4
TPR-204ENST00000469463 MYO19Q96H55 970 aa6.3□□□□□ -1.4
TPR-204ENST00000469463 VRTNQ9H8Y1 702 aa6.3□□□□□ -1.4
TPR-204ENST00000469463 RFX1P22670 979 aa6.29□□□□□ -1.4
TPR-204ENST00000469463 GRNP28799 593 aaKnown RBP6.29□□□□□ -1.4
TPR-204ENST00000469463 DGKZQ13574 1117 aa6.29□□□□□ -1.4
TPR-204ENST00000469463 GRIK5Q16478 980 aa6.29□□□□□ -1.4
TPR-204ENST00000469463 C11orf91Q3C1V1 193 aa6.29□□□□□ -1.4
TPR-204ENST00000469463 PERM1Q5SV97 790 aa6.29□□□□□ -1.4
TPR-204ENST00000469463 SRA1Q9HD15 236 aaKnown RBP6.29□□□□□ -1.4
TPR-204ENST00000469463 KLK14Q9P0G3 267 aa6.29□□□□□ -1.4
TPR-204ENST00000469463 MICAL2O94851 1124 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 EGFRP00533 1210 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 LMOD1P29536 600 aaPredicted RBP6.28□□□□□ -1.4
TPR-204ENST00000469463 WEE1P30291 646 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 KRT25Q7Z3Z0 450 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 SLC51AQ86UW1 340 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 CCDC82Q8N4S0 544 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 IFT43Q96FT9 208 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 QTRT2Q9H974 415 aaKnown RBP6.28□□□□□ -1.4
TPR-204ENST00000469463 ZFATQ9P243 1243 aa6.28□□□□□ -1.4
TPR-204ENST00000469463 ZBTB42B2RXF5 422 aa6.27□□□□□ -1.41
TPR-204ENST00000469463 TARSP26639 723 aaKnown RBP6.27□□□□□ -1.41
TPR-204ENST00000469463 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
TPR-204ENST00000469463 RNF112Q9ULX5 631 aa6.27□□□□□ -1.41
TPR-204ENST00000469463 HYAL3O43820 417 aaPredicted RBP6.26□□□□□ -1.41
TPR-204ENST00000469463 EIF2AK2P19525 551 aaKnown RBP6.26□□□□□ -1.41
TPR-204ENST00000469463 IREB2P48200 963 aaKnown RBP6.26□□□□□ -1.41
TPR-204ENST00000469463 MAP4K3Q8IVH8 894 aa6.26□□□□□ -1.41
TPR-204ENST00000469463 CACTIN-AS1Q8N1I8 211 aa6.26□□□□□ -1.41
TPR-204ENST00000469463 ARXQ96QS3 562 aa6.26□□□□□ -1.41
TPR-204ENST00000469463 SMG9Q9H0W8 520 aaKnown RBP6.26□□□□□ -1.41
TPR-204ENST00000469463 RBSNQ9H1K0 784 aa6.26□□□□□ -1.41
TPR-204ENST00000469463 TLR7Q9NYK1 1049 aaKnown RBP6.26□□□□□ -1.41
TPR-204ENST00000469463 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
TPR-204ENST00000469463 SASH3O75995 380 aa6.25□□□□□ -1.41
TPR-204ENST00000469463 PSAPP07602 524 aa6.25□□□□□ -1.41
TPR-204ENST00000469463 HOXD8P13378 290 aaPredicted RBP6.25□□□□□ -1.41
TPR-204ENST00000469463 NOS3P29474 1203 aa6.25□□□□□ -1.41
TPR-204ENST00000469463 SOX18P35713 384 aa6.25□□□□□ -1.41
TPR-204ENST00000469463 PLAURQ03405 335 aa6.25□□□□□ -1.41
TPR-204ENST00000469463 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
TPR-204ENST00000469463 SERPINA10Q9UK55 444 aa6.25□□□□□ -1.41
TPR-204ENST00000469463 RTCBQ9Y3I0 505 aaKnown RBP6.25□□□□□ -1.41
TPR-204ENST00000469463 GHRHP01286 108 aa6.24□□□□□ -1.41
TPR-204ENST00000469463 MLLT1Q03111 559 aaPredicted RBP6.24□□□□□ -1.41
TPR-204ENST00000469463 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
TPR-204ENST00000469463 PRR23CQ6ZRP0 262 aa6.24□□□□□ -1.41
TPR-204ENST00000469463 FAM200AQ8TCP9 573 aa6.24□□□□□ -1.41
TPR-204ENST00000469463 AKTIPQ9H8T0 292 aa6.24□□□□□ -1.41
TPR-204ENST00000469463 DLL1O00548 723 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 OPLAHO14841 1288 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 XYLBO75191 536 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 DEAF1O75398 565 aaPredicted RBP6.23□□□□□ -1.41
TPR-204ENST00000469463 LGR5O75473 907 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 TREML1Q86YW5 311 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 TMEM130Q8N3G9 435 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 PLD4Q96BZ4 506 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 MEGF10Q96KG7 1140 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 MUC3BQ9H195 1237 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 C1orf115Q9H7X2 142 aa6.23□□□□□ -1.41
TPR-204ENST00000469463 LOC102724428A0A0B4J2F2 783 aa6.22□□□□□ -1.41
TPR-204ENST00000469463 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
TPR-204ENST00000469463 SIK1P57059 783 aa6.22□□□□□ -1.41
TPR-204ENST00000469463 SWI5Q1ZZU3 235 aa6.22□□□□□ -1.41
TPR-204ENST00000469463 CFAP70Q5T0N1 1121 aa6.22□□□□□ -1.41
TPR-204ENST00000469463 DZIP1LQ8IYY4 767 aaKnown RBP6.22□□□□□ -1.41
TPR-204ENST00000469463 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.21□□□□□ -1.42
TPR-204ENST00000469463 HFE2Q6ZVN8 426 aa6.21□□□□□ -1.42
TPR-204ENST00000469463 RGL4Q8IZJ4 473 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms