RNA–Protein interactions for RNA: ENST00000466544.5

RNFT1-202, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 2

Gene RNFT1, Length 1,809 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-202ENST00000466544 NPHP1O15259 732 aa17.17■□□□□ 0.34
RNFT1-202ENST00000466544 CSF1RP07333 972 aa17.17■□□□□ 0.34
RNFT1-202ENST00000466544 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
RNFT1-202ENST00000466544 MMP10P09238 476 aa17.17■□□□□ 0.34
RNFT1-202ENST00000466544 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
RNFT1-202ENST00000466544 PRR5LQ6MZQ0 368 aa17.17■□□□□ 0.34
RNFT1-202ENST00000466544 NYXQ9GZU5 481 aa17.17■□□□□ 0.34
RNFT1-202ENST00000466544 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
RNFT1-202ENST00000466544 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
RNFT1-202ENST00000466544 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
RNFT1-202ENST00000466544 GCC1Q96CN9 775 aa17.16■□□□□ 0.34
RNFT1-202ENST00000466544 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
RNFT1-202ENST00000466544 SEC31BQ9NQW1 1179 aa17.16■□□□□ 0.34
RNFT1-202ENST00000466544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.15■□□□□ 0.34
RNFT1-202ENST00000466544 DDX60Q8IY21 1712 aaKnown RBP17.15■□□□□ 0.34
RNFT1-202ENST00000466544 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.34
RNFT1-202ENST00000466544 ITGA6P23229 1130 aa17.14■□□□□ 0.34
RNFT1-202ENST00000466544 SLC10A5Q5PT55 438 aa17.14■□□□□ 0.34
RNFT1-202ENST00000466544 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.34
RNFT1-202ENST00000466544 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.34
RNFT1-202ENST00000466544 RGS3P49796 1198 aa17.14■□□□□ 0.33
RNFT1-202ENST00000466544 NUCB1Q02818 461 aa17.14■□□□□ 0.33
RNFT1-202ENST00000466544 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
RNFT1-202ENST00000466544 PDE4AP27815 886 aa17.13■□□□□ 0.33
RNFT1-202ENST00000466544 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
RNFT1-202ENST00000466544 CCDC57Q2TAC2 916 aa17.13■□□□□ 0.33
RNFT1-202ENST00000466544 LRRC24Q50LG9 513 aa17.13■□□□□ 0.33
RNFT1-202ENST00000466544 IL1RAPL2Q9NP60 686 aa17.13■□□□□ 0.33
RNFT1-202ENST00000466544 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
RNFT1-202ENST00000466544 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
RNFT1-202ENST00000466544 CHD1LQ86WJ1 897 aa17.12■□□□□ 0.33
RNFT1-202ENST00000466544 OTUD7AQ8TE49 926 aaPredicted RBP17.12■□□□□ 0.33
RNFT1-202ENST00000466544 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
RNFT1-202ENST00000466544 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
RNFT1-202ENST00000466544 COL4A1P02462 1669 aa17.11■□□□□ 0.33
RNFT1-202ENST00000466544 SASH1O94885 1247 aa17.11■□□□□ 0.33
RNFT1-202ENST00000466544 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
RNFT1-202ENST00000466544 CCDC152Q4G0S7 254 aa17.11■□□□□ 0.33
RNFT1-202ENST00000466544 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
RNFT1-202ENST00000466544 QSER1Q2KHR3 1735 aa17.11■□□□□ 0.33
RNFT1-202ENST00000466544 ANKRD18BA2A2Z9 1011 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
RNFT1-202ENST00000466544 MYH3P11055 1940 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
RNFT1-202ENST00000466544 ST5P78524 1137 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
RNFT1-202ENST00000466544 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 LRRCC1Q9C099 1032 aa17.1■□□□□ 0.33
RNFT1-202ENST00000466544 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
RNFT1-202ENST00000466544 TAF1P21675 1872 aa17.08■□□□□ 0.33
RNFT1-202ENST00000466544 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.33
RNFT1-202ENST00000466544 TFCP2Q12800 502 aa17.08■□□□□ 0.33
RNFT1-202ENST00000466544 LAMB2P55268 1798 aa17.08■□□□□ 0.32
RNFT1-202ENST00000466544 EYA2O00167 538 aa17.07■□□□□ 0.32
RNFT1-202ENST00000466544 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
RNFT1-202ENST00000466544 CELF1Q92879 486 aaKnown RBP17.07■□□□□ 0.32
RNFT1-202ENST00000466544 LDHAL6AQ6ZMR3 332 aa17.07■□□□□ 0.32
RNFT1-202ENST00000466544 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
RNFT1-202ENST00000466544 CASZ1Q86V15 1759 aa17.06■□□□□ 0.32
RNFT1-202ENST00000466544 TSHZ3Q63HK5 1081 aa17.06■□□□□ 0.32
RNFT1-202ENST00000466544 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
RNFT1-202ENST00000466544 HSP90AB4PQ58FF6 505 aa17.05■□□□□ 0.32
RNFT1-202ENST00000466544 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
RNFT1-202ENST00000466544 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
RNFT1-202ENST00000466544 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
RNFT1-202ENST00000466544 SLC16A10Q8TF71 515 aa17.05■□□□□ 0.32
RNFT1-202ENST00000466544 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
RNFT1-202ENST00000466544 BRIP1Q9BX63 1249 aa17.04■□□□□ 0.32
RNFT1-202ENST00000466544 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
RNFT1-202ENST00000466544 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
RNFT1-202ENST00000466544 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
RNFT1-202ENST00000466544 SNAP23O00161 211 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 IL15P40933 162 aaPredicted RBP17.03■□□□□ 0.32
RNFT1-202ENST00000466544 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
RNFT1-202ENST00000466544 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 TLR7Q9NYK1 1049 aaKnown RBP17.03■□□□□ 0.32
RNFT1-202ENST00000466544 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
RNFT1-202ENST00000466544 CIAO1O76071 339 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
RNFT1-202ENST00000466544 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 AACSQ86V21 672 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
RNFT1-202ENST00000466544 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
RNFT1-202ENST00000466544 TAF5LO75529 589 aa17.02■□□□□ 0.31
RNFT1-202ENST00000466544 TIMM10P62072 90 aa17.02■□□□□ 0.31
RNFT1-202ENST00000466544 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.31
RNFT1-202ENST00000466544 METTL24Q5JXM2 366 aa17.02■□□□□ 0.31
RNFT1-202ENST00000466544 CDC5LQ99459 802 aaKnown RBP17.02■□□□□ 0.31
RNFT1-202ENST00000466544 MTFR1LQ9H019 292 aa17.02■□□□□ 0.31
RNFT1-202ENST00000466544 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
RNFT1-202ENST00000466544 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
RNFT1-202ENST00000466544 CHRNA5P30532 468 aa17.01■□□□□ 0.31
RNFT1-202ENST00000466544 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
RNFT1-202ENST00000466544 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
RNFT1-202ENST00000466544 RIC1Q4ADV7 1423 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms