RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
ABCF3-205ENST00000466416 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
ABCF3-205ENST00000466416 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
ABCF3-205ENST00000466416 NTSR2O95665 410 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 GPTP24298 496 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 NOM1Q5C9Z4 860 aaKnown RBP12.33□□□□□ -0.44
ABCF3-205ENST00000466416 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 NGEFQ8N5V2 710 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 ZNF296Q8WUU4 475 aaPredicted RBP12.33□□□□□ -0.44
ABCF3-205ENST00000466416 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
ABCF3-205ENST00000466416 YDJCA8MPS7 323 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 ADM5C9JUS6 153 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 RPS12P25398 132 aaKnown RBP12.32□□□□□ -0.44
ABCF3-205ENST00000466416 FKBP1BP68106 108 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
ABCF3-205ENST00000466416 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 SULF1Q8IWU6 871 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 PHACTR3Q96KR7 559 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
ABCF3-205ENST00000466416 ABCC4O15439 1325 aa12.32□□□□□ -0.44
ABCF3-205ENST00000466416 PSMD14O00487 310 aa12.31□□□□□ -0.44
ABCF3-205ENST00000466416 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
ABCF3-205ENST00000466416 FXR1P51114 621 aaKnown RBP eCLIP12.31□□□□□ -0.44
ABCF3-205ENST00000466416 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
ABCF3-205ENST00000466416 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
ABCF3-205ENST00000466416 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
ABCF3-205ENST00000466416 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 MCM10Q7L590 875 aa12.3□□□□□ -0.44
ABCF3-205ENST00000466416 TMC4Q7Z404 712 aa12.3□□□□□ -0.44
ABCF3-205ENST00000466416 UTP14AQ9BVJ6 771 aaKnown RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
ABCF3-205ENST00000466416 GPR25O00155 361 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 EGFRP00533 1210 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 TM4SF4P48230 202 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 WASHC4Q2M389 1173 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 DDX46Q7L014 1031 aaKnown RBP12.29□□□□□ -0.44
ABCF3-205ENST00000466416 CDCA5Q96FF9 252 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
ABCF3-205ENST00000466416 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
ABCF3-205ENST00000466416 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
ABCF3-205ENST00000466416 POLR2AP24928 1970 aaKnown RBP12.28□□□□□ -0.44
ABCF3-205ENST00000466416 NUP98P52948 1817 aa12.27□□□□□ -0.44
ABCF3-205ENST00000466416 FKTNO75072 461 aa12.27□□□□□ -0.45
ABCF3-205ENST00000466416 GRAPQ13588 217 aa12.27□□□□□ -0.45
ABCF3-205ENST00000466416 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
ABCF3-205ENST00000466416 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
ABCF3-205ENST00000466416 CFHR5Q9BXR6 569 aa12.27□□□□□ -0.45
ABCF3-205ENST00000466416 GGA3Q9NZ52 723 aa12.27□□□□□ -0.45
ABCF3-205ENST00000466416 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
ABCF3-205ENST00000466416 MYL6BP14649 208 aa12.26□□□□□ -0.45
ABCF3-205ENST00000466416 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
ABCF3-205ENST00000466416 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
ABCF3-205ENST00000466416 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
ABCF3-205ENST00000466416 VIL1P09327 827 aaKnown RBP12.25□□□□□ -0.45
ABCF3-205ENST00000466416 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
ABCF3-205ENST00000466416 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
ABCF3-205ENST00000466416 MIS18AQ9NYP9 233 aa12.25□□□□□ -0.45
ABCF3-205ENST00000466416 SREBF2Q12772 1141 aa12.24□□□□□ -0.45
ABCF3-205ENST00000466416 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
ABCF3-205ENST00000466416 EYA3Q99504 573 aa12.24□□□□□ -0.45
ABCF3-205ENST00000466416 NUDCQ9Y266 331 aa12.24□□□□□ -0.45
ABCF3-205ENST00000466416 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 RIMBP2O15034 1052 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 ECE2O60344 883 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
ABCF3-205ENST00000466416 ZNF280AP59817 542 aaPredicted RBP12.23□□□□□ -0.45
ABCF3-205ENST00000466416 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
ABCF3-205ENST00000466416 SCARF1Q14162 830 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
ABCF3-205ENST00000466416 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
ABCF3-205ENST00000466416 NSFL1CQ9UNZ2 370 aaKnown RBP12.23□□□□□ -0.45
ABCF3-205ENST00000466416 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
ABCF3-205ENST00000466416 ASTN2O75129 1339 aaPredicted RBP12.22□□□□□ -0.45
ABCF3-205ENST00000466416 UBE2Q2LH0YL09 131 aa12.22□□□□□ -0.45
ABCF3-205ENST00000466416 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
ABCF3-205ENST00000466416 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
ABCF3-205ENST00000466416 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
ABCF3-205ENST00000466416 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
ABCF3-205ENST00000466416 PAPPA2Q9BXP8 1791 aa12.21□□□□□ -0.45
ABCF3-205ENST00000466416 DLL1O00548 723 aa12.21□□□□□ -0.45
ABCF3-205ENST00000466416 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
ABCF3-205ENST00000466416 AGBL3Q8NEM8 1001 aa12.21□□□□□ -0.45
ABCF3-205ENST00000466416 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
ABCF3-205ENST00000466416 TRMT112Q9UI30 125 aaKnown RBP12.21□□□□□ -0.45
ABCF3-205ENST00000466416 TRIM17Q9Y577 477 aa12.21□□□□□ -0.45
ABCF3-205ENST00000466416 KIAA0100Q14667 2235 aaKnown RBP12.21□□□□□ -0.46
ABCF3-205ENST00000466416 SH3TC1Q8TE82 1336 aa12.2□□□□□ -0.46
ABCF3-205ENST00000466416 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
ABCF3-205ENST00000466416 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.46
ABCF3-205ENST00000466416 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms