RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 JCADQ9P266 1359 aa16.4■□□□□ 0.22
UBE4B-206ENST00000466379 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 ZGPATQ8N5A5 531 aaKnown RBP16.39■□□□□ 0.21
UBE4B-206ENST00000466379 PODXL2Q9NZ53 605 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
UBE4B-206ENST00000466379 CHGBP05060 677 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 MCM4P33991 863 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 TNPO1Q92973 898 aaKnown RBP16.39■□□□□ 0.21
UBE4B-206ENST00000466379 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
UBE4B-206ENST00000466379 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
UBE4B-206ENST00000466379 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
UBE4B-206ENST00000466379 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
UBE4B-206ENST00000466379 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
UBE4B-206ENST00000466379 VPS72Q15906 364 aa16.38■□□□□ 0.21
UBE4B-206ENST00000466379 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
UBE4B-206ENST00000466379 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
UBE4B-206ENST00000466379 ZNF609O15014 1411 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 CSF1RP07333 972 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 SSFA2P28290 1259 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
UBE4B-206ENST00000466379 IL17RAQ96F46 866 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 CDHR2Q9BYE9 1310 aa16.37■□□□□ 0.21
UBE4B-206ENST00000466379 HIP1O00291 1037 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 CIAO1O76071 339 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
UBE4B-206ENST00000466379 GREM2Q9H772 168 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
UBE4B-206ENST00000466379 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
UBE4B-206ENST00000466379 KCNQ4P56696 695 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
UBE4B-206ENST00000466379 PTF1AQ7RTS3 328 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 HAUS7Q99871 368 aa16.36■□□□□ 0.21
UBE4B-206ENST00000466379 CPA1P15085 419 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
UBE4B-206ENST00000466379 TTLL11Q8NHH1 800 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 CTSWP56202 376 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 GSE1Q14687 1217 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 ZNF34Q8IZ26 560 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 GPR108Q9NPR9 543 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
UBE4B-206ENST00000466379 ITGA6P23229 1130 aa16.34■□□□□ 0.21
UBE4B-206ENST00000466379 PKP1Q13835 747 aa16.34■□□□□ 0.21
UBE4B-206ENST00000466379 USP21Q9UK80 565 aa16.34■□□□□ 0.21
UBE4B-206ENST00000466379 RBM8AQ9Y5S9 174 aaKnown RBP16.34■□□□□ 0.21
UBE4B-206ENST00000466379 ADORA1P30542 326 aa16.34■□□□□ 0.21
UBE4B-206ENST00000466379 FAM182BQ5T319 152 aa16.34■□□□□ 0.21
UBE4B-206ENST00000466379 LARP6Q9BRS8 491 aaKnown RBP16.34■□□□□ 0.21
UBE4B-206ENST00000466379 MED23Q9ULK4 1368 aa16.33■□□□□ 0.21
UBE4B-206ENST00000466379 GOLIM4O00461 696 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 KCNJ4P48050 445 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 MCM2P49736 904 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 ADCK5Q3MIX3 580 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 SUSD4Q5VX71 490 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.2
UBE4B-206ENST00000466379 RREB1Q92766 1687 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 MYH3P11055 1940 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.2
UBE4B-206ENST00000466379 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.2
UBE4B-206ENST00000466379 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
UBE4B-206ENST00000466379 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
UBE4B-206ENST00000466379 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
UBE4B-206ENST00000466379 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
UBE4B-206ENST00000466379 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
UBE4B-206ENST00000466379 CREB3L3Q68CJ9 461 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 MAP4K1Q92918 833 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 JAKMIP1Q96N16 626 aaKnown RBP16.31■□□□□ 0.2
UBE4B-206ENST00000466379 PAG1Q9NWQ8 432 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 PDE8AO60658 829 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
UBE4B-206ENST00000466379 AK2P54819 239 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
UBE4B-206ENST00000466379 COL5A3P25940 1745 aaPredicted RBP16.3■□□□□ 0.2
UBE4B-206ENST00000466379 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 TTC14Q96N46 770 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
UBE4B-206ENST00000466379 TAF6LQ9Y6J9 622 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
UBE4B-206ENST00000466379 SLC27A2O14975 620 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 CUL4AQ13619 759 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 COL9A3Q14050 684 aaPredicted RBP16.3■□□□□ 0.2
UBE4B-206ENST00000466379 GORABQ5T7V8 394 aa16.3■□□□□ 0.2
UBE4B-206ENST00000466379 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms