RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 MCM10Q7L590 875 aa17.77■□□□□ 0.44
HDAC6-215ENST00000465457 NIM1KQ8IY84 436 aa17.77■□□□□ 0.44
HDAC6-215ENST00000465457 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-215ENST00000465457 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.44
HDAC6-215ENST00000465457 ADARB2Q9NS39 739 aaKnown RBP17.77■□□□□ 0.44
HDAC6-215ENST00000465457 IL16Q14005 1332 aa17.76■□□□□ 0.43
HDAC6-215ENST00000465457 PPEF1O14829 653 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-215ENST00000465457 GMPSP49915 693 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-215ENST00000465457 HIRAP54198 1017 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-215ENST00000465457 TRPM4Q8TD43 1214 aa17.76■□□□□ 0.43
HDAC6-215ENST00000465457 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
HDAC6-215ENST00000465457 GPTP24298 496 aa17.75■□□□□ 0.43
HDAC6-215ENST00000465457 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-215ENST00000465457 PRKAR2BP31323 418 aa17.75■□□□□ 0.43
HDAC6-215ENST00000465457 TMPOP42166 694 aaKnown RBP17.75■□□□□ 0.43
HDAC6-215ENST00000465457 CXCL9Q07325 125 aa17.75■□□□□ 0.43
HDAC6-215ENST00000465457 CC2D2BQ6DHV5 1058 aa17.75■□□□□ 0.43
HDAC6-215ENST00000465457 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
HDAC6-215ENST00000465457 HHIPL1Q96JK4 782 aa17.75■□□□□ 0.43
HDAC6-215ENST00000465457 DUOX1Q9NRD9 1551 aa17.74■□□□□ 0.43
HDAC6-215ENST00000465457 DLG5Q8TDM6 1919 aa17.74■□□□□ 0.43
HDAC6-215ENST00000465457 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
HDAC6-215ENST00000465457 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
HDAC6-215ENST00000465457 RGL2O15211 777 aa17.73■□□□□ 0.43
HDAC6-215ENST00000465457 LMOD3Q0VAK6 560 aa17.73■□□□□ 0.43
HDAC6-215ENST00000465457 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-215ENST00000465457 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-215ENST00000465457 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
HDAC6-215ENST00000465457 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
HDAC6-215ENST00000465457 FAM155AB1AL88 458 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-215ENST00000465457 HUNKP57058 714 aa17.71■□□□□ 0.43
HDAC6-215ENST00000465457 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
HDAC6-215ENST00000465457 NYXQ9GZU5 481 aa17.71■□□□□ 0.43
HDAC6-215ENST00000465457 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
HDAC6-215ENST00000465457 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
HDAC6-215ENST00000465457 IBTKQ9P2D0 1353 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-215ENST00000465457 RAD17O75943 681 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 NOGQ13253 232 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 NEUROD2Q15784 382 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 PRPF38BQ5VTL8 546 aaKnown RBP17.7■□□□□ 0.42
HDAC6-215ENST00000465457 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 MIS18AQ9NYP9 233 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 ZNRF3Q9ULT6 936 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 MAP3K15Q6ZN16 1313 aa17.7■□□□□ 0.42
HDAC6-215ENST00000465457 NTSR2O95665 410 aa17.69■□□□□ 0.42
HDAC6-215ENST00000465457 RIPK4P57078 832 aa17.69■□□□□ 0.42
HDAC6-215ENST00000465457 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
HDAC6-215ENST00000465457 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
HDAC6-215ENST00000465457 LRRC37AA6NMS7 1700 aa17.69■□□□□ 0.42
HDAC6-215ENST00000465457 ABCC4O15439 1325 aa17.69■□□□□ 0.42
HDAC6-215ENST00000465457 COL4A1P02462 1669 aa17.68■□□□□ 0.42
HDAC6-215ENST00000465457 YDJCA8MPS7 323 aa17.68■□□□□ 0.42
HDAC6-215ENST00000465457 EGFRP00533 1210 aa17.68■□□□□ 0.42
HDAC6-215ENST00000465457 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
HDAC6-215ENST00000465457 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
HDAC6-215ENST00000465457 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
HDAC6-215ENST00000465457 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-215ENST00000465457 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
HDAC6-215ENST00000465457 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
HDAC6-215ENST00000465457 TRPA1O75762 1119 aa17.66■□□□□ 0.42
HDAC6-215ENST00000465457 KIF23Q02241 960 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-215ENST00000465457 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-215ENST00000465457 MKI67P46013 3256 aaKnown RBP17.66■□□□□ 0.42
HDAC6-215ENST00000465457 SCN9AQ15858 1988 aa17.66■□□□□ 0.42
HDAC6-215ENST00000465457 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 MYL6BP14649 208 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 GRIPAP1Q4V328 841 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 RGMBQ6NW40 437 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 SAMD7Q7Z3H4 446 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 MICALL2Q8IY33 904 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 ZC3H15Q8WU90 426 aaKnown RBP17.65■□□□□ 0.42
HDAC6-215ENST00000465457 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-215ENST00000465457 RNF186Q9NXI6 227 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
HDAC6-215ENST00000465457 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
HDAC6-215ENST00000465457 SAGE1Q9NXZ1 904 aa17.64■□□□□ 0.41
HDAC6-215ENST00000465457 CNOT7Q9UIV1 285 aaKnown RBP17.64■□□□□ 0.41
HDAC6-215ENST00000465457 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
HDAC6-215ENST00000465457 RTF1Q92541 710 aaKnown RBP17.63■□□□□ 0.41
HDAC6-215ENST00000465457 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
HDAC6-215ENST00000465457 TBC1D10BQ4KMP7 808 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-215ENST00000465457 DPP8Q6V1X1 898 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-215ENST00000465457 GBA2Q9HCG7 927 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-215ENST00000465457 FANCIQ9NVI1 1328 aa17.62■□□□□ 0.41
HDAC6-215ENST00000465457 KRT26Q7Z3Y9 468 aa17.61■□□□□ 0.41
HDAC6-215ENST00000465457 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
HDAC6-215ENST00000465457 HPS5Q9UPZ3 1129 aa17.61■□□□□ 0.41
HDAC6-215ENST00000465457 ASTN2O75129 1339 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-215ENST00000465457 HTTP42858 3142 aa17.61■□□□□ 0.41
HDAC6-215ENST00000465457 SLC10A3P09131 477 aa17.6■□□□□ 0.41
HDAC6-215ENST00000465457 ZNF157P51786 506 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-215ENST00000465457 GNAI1P63096 354 aa17.6■□□□□ 0.41
HDAC6-215ENST00000465457 CTU1Q7Z7A3 348 aaKnown RBP17.6■□□□□ 0.41
HDAC6-215ENST00000465457 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
HDAC6-215ENST00000465457 VPS33BQ9H267 617 aa17.6■□□□□ 0.41
HDAC6-215ENST00000465457 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
HDAC6-215ENST00000465457 PSMD14O00487 310 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms