RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 MTX1Q13505 466 aa18.69■□□□□ 0.58
ABCF3-204ENST00000463685 POLA2Q14181 598 aa18.69■□□□□ 0.58
ABCF3-204ENST00000463685 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
ABCF3-204ENST00000463685 PA2G4Q9UQ80 394 aaKnown RBP18.69■□□□□ 0.58
ABCF3-204ENST00000463685 MYH3P11055 1940 aa18.68■□□□□ 0.58
ABCF3-204ENST00000463685 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
ABCF3-204ENST00000463685 SSH3Q8TE77 659 aa18.68■□□□□ 0.58
ABCF3-204ENST00000463685 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
ABCF3-204ENST00000463685 RWDD1Q9H446 243 aaPredicted RBP18.68■□□□□ 0.58
ABCF3-204ENST00000463685 HSP90B1P14625 803 aaKnown RBP18.67■□□□□ 0.58
ABCF3-204ENST00000463685 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-204ENST00000463685 ZNF594Q96JF6 807 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-204ENST00000463685 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
ABCF3-204ENST00000463685 ANKRD31Q8N7Z5 1873 aa18.67■□□□□ 0.58
ABCF3-204ENST00000463685 HMMRO75330 724 aa18.66■□□□□ 0.58
ABCF3-204ENST00000463685 ITGA6P23229 1130 aa18.66■□□□□ 0.58
ABCF3-204ENST00000463685 POLD1P28340 1107 aa18.66■□□□□ 0.58
ABCF3-204ENST00000463685 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
ABCF3-204ENST00000463685 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
ABCF3-204ENST00000463685 PTGER2P43116 358 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 SGIP1Q9BQI5 828 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 BRIP1Q9BX63 1249 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 SIL1Q9H173 461 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 COL4A1P02462 1669 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 RIC1Q4ADV7 1423 aa18.65■□□□□ 0.58
ABCF3-204ENST00000463685 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
ABCF3-204ENST00000463685 IFIT5Q13325 482 aaKnown RBP18.64■□□□□ 0.57
ABCF3-204ENST00000463685 EXOC6BQ9Y2D4 811 aa18.64■□□□□ 0.57
ABCF3-204ENST00000463685 KDM2BQ8NHM5 1336 aa18.64■□□□□ 0.57
ABCF3-204ENST00000463685 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
ABCF3-204ENST00000463685 APBB1O00213 710 aa18.63■□□□□ 0.57
ABCF3-204ENST00000463685 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
ABCF3-204ENST00000463685 TAF1P21675 1872 aa18.63■□□□□ 0.57
ABCF3-204ENST00000463685 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
ABCF3-204ENST00000463685 RPGRQ92834 1020 aaKnown RBP18.62■□□□□ 0.57
ABCF3-204ENST00000463685 PUS3Q9BZE2 481 aaKnown RBP18.62■□□□□ 0.57
ABCF3-204ENST00000463685 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
ABCF3-204ENST00000463685 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
ABCF3-204ENST00000463685 C10orf71Q711Q0 1435 aa18.62■□□□□ 0.57
ABCF3-204ENST00000463685 KLRG2A4D1S0 409 aaPredicted RBP18.61■□□□□ 0.57
ABCF3-204ENST00000463685 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
ABCF3-204ENST00000463685 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
ABCF3-204ENST00000463685 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
ABCF3-204ENST00000463685 CHRNA5P30532 468 aa18.6■□□□□ 0.57
ABCF3-204ENST00000463685 PDE6BP35913 854 aa18.6■□□□□ 0.57
ABCF3-204ENST00000463685 OS9Q13438 667 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-204ENST00000463685 LRRC24Q50LG9 513 aa18.6■□□□□ 0.57
ABCF3-204ENST00000463685 DDX46Q7L014 1031 aaKnown RBP18.6■□□□□ 0.57
ABCF3-204ENST00000463685 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-204ENST00000463685 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
ABCF3-204ENST00000463685 CELF1Q92879 486 aaKnown RBP18.6■□□□□ 0.57
ABCF3-204ENST00000463685 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
ABCF3-204ENST00000463685 SPON1Q9HCB6 807 aa18.6■□□□□ 0.57
ABCF3-204ENST00000463685 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-204ENST00000463685 SMARCA5O60264 1052 aaPredicted RBP18.59■□□□□ 0.57
ABCF3-204ENST00000463685 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
ABCF3-204ENST00000463685 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
ABCF3-204ENST00000463685 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
ABCF3-204ENST00000463685 NOP58Q9Y2X3 529 aaKnown RBP18.59■□□□□ 0.57
ABCF3-204ENST00000463685 SPEF2Q9C093 1822 aa18.58■□□□□ 0.57
ABCF3-204ENST00000463685 SRGNP10124 158 aa18.58■□□□□ 0.56
ABCF3-204ENST00000463685 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.56
ABCF3-204ENST00000463685 ATG9AQ7Z3C6 839 aa18.58■□□□□ 0.56
ABCF3-204ENST00000463685 RBM17Q96I25 401 aaKnown RBP18.58■□□□□ 0.56
ABCF3-204ENST00000463685 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.56
ABCF3-204ENST00000463685 H0YIN7 160 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 EYA2O00167 538 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 NPR1P16066 1061 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-204ENST00000463685 LDHAL6AQ6ZMR3 332 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 SKAP1Q86WV1 359 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 ANKRD18AQ8IVF6 992 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 ZNF622Q969S3 477 aaKnown RBP eCLIP18.57■□□□□ 0.56
ABCF3-204ENST00000463685 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 CNNM1Q9NRU3 951 aa18.57■□□□□ 0.56
ABCF3-204ENST00000463685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-204ENST00000463685 A0A0G2JLW4 131 aa18.56■□□□□ 0.56
ABCF3-204ENST00000463685 SASH1O94885 1247 aa18.56■□□□□ 0.56
ABCF3-204ENST00000463685 IGHMBP2P38935 993 aaKnown RBP18.56■□□□□ 0.56
ABCF3-204ENST00000463685 RPS8P62241 208 aaKnown RBP18.56■□□□□ 0.56
ABCF3-204ENST00000463685 GRAPQ13588 217 aa18.56■□□□□ 0.56
ABCF3-204ENST00000463685 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
ABCF3-204ENST00000463685 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
ABCF3-204ENST00000463685 PDZRN3Q9UPQ7 1066 aa18.56■□□□□ 0.56
ABCF3-204ENST00000463685 LRP5O75197 1615 aa18.56■□□□□ 0.56
ABCF3-204ENST00000463685 DPEP1P16444 411 aa18.55■□□□□ 0.56
ABCF3-204ENST00000463685 MASTLQ96GX5 879 aa18.55■□□□□ 0.56
ABCF3-204ENST00000463685 MPHOSPH8Q99549 860 aa18.55■□□□□ 0.56
ABCF3-204ENST00000463685 IL1RAPL2Q9NP60 686 aa18.55■□□□□ 0.56
ABCF3-204ENST00000463685 RIPOR2Q9Y4F9 1068 aa18.55■□□□□ 0.56
ABCF3-204ENST00000463685 KIF13BQ9NQT8 1826 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 RAB11FIP3O75154 756 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 CIAO1O76071 339 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 NUCB1Q02818 461 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 TFCP2Q12800 502 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 HSP90AB4PQ58FF6 505 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 HELBQ8NG08 1087 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-204ENST00000463685 RHPN1Q8TCX5 695 aa18.54■□□□□ 0.56
ABCF3-204ENST00000463685 CRAMP1Q96RY5 1269 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms