RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, human

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL4A-205	ENST00000463426	TNN	Q9UQP3	1299 aa		32.81	■■■□□ 2.84
CUL4A-205	ENST00000463426	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.8	■■■□□ 2.84
CUL4A-205	ENST00000463426	RLBP1	P12271	317 aa		32.8	■■■□□ 2.84
CUL4A-205	ENST00000463426	DDX46	Q7L014	1031 aa	Known RBP	32.8	■■■□□ 2.84
CUL4A-205	ENST00000463426	TTLL6	Q8N841	843 aa		32.8	■■■□□ 2.84
CUL4A-205	ENST00000463426	DDX19B	Q9UMR2	479 aa		32.8	■■■□□ 2.84
CUL4A-205	ENST00000463426	PLIN1	O60240	522 aa		32.79	■■■□□ 2.84
CUL4A-205	ENST00000463426	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
CUL4A-205	ENST00000463426	MVP	Q14764	893 aa	Known RBP	32.78	■■■□□ 2.84
CUL4A-205	ENST00000463426	DALRD3	Q5D0E6	543 aa	Known RBP	32.78	■■■□□ 2.84
CUL4A-205	ENST00000463426	TMC4	Q7Z404	712 aa		32.78	■■■□□ 2.84
CUL4A-205	ENST00000463426	PANK1	Q8TE04	598 aa		32.78	■■■□□ 2.84
CUL4A-205	ENST00000463426	JARID2	Q92833	1246 aa	Predicted RBP	32.78	■■■□□ 2.84
CUL4A-205	ENST00000463426	CSF1R	P07333	972 aa		32.77	■■■□□ 2.84
CUL4A-205	ENST00000463426	TTLL11	Q8NHH1	800 aa		32.77	■■■□□ 2.84
CUL4A-205	ENST00000463426	CENPB	P07199	599 aa	Predicted RBP	32.76	■■■□□ 2.83
CUL4A-205	ENST00000463426	C3orf67	Q6ZVT6	689 aa		32.76	■■■□□ 2.83
CUL4A-205	ENST00000463426	SUCLG2	Q96I99	432 aa		32.75	■■■□□ 2.83
CUL4A-205	ENST00000463426	MEIS3	Q99687	375 aa		32.75	■■■□□ 2.83
CUL4A-205	ENST00000463426	DCAF8L1	A6NGE4	600 aa		32.74	■■■□□ 2.83
CUL4A-205	ENST00000463426	FOXO4	P98177	505 aa		32.74	■■■□□ 2.83
CUL4A-205	ENST00000463426	RABL6	Q3YEC7	729 aa	Predicted RBP	32.74	■■■□□ 2.83
CUL4A-205	ENST00000463426	SOGA3	Q5TF21	947 aa		32.74	■■■□□ 2.83
CUL4A-205	ENST00000463426	CDC5L	Q99459	802 aa	Known RBP	32.74	■■■□□ 2.83
CUL4A-205	ENST00000463426	SLX4	Q8IY92	1834 aa		32.74	■■■□□ 2.83
CUL4A-205	ENST00000463426	BBOX1	O75936	387 aa		32.73	■■■□□ 2.83
CUL4A-205	ENST00000463426	GNAI2	P04899	355 aa		32.73	■■■□□ 2.83
CUL4A-205	ENST00000463426	GRAP	Q13588	217 aa		32.73	■■■□□ 2.83
CUL4A-205	ENST00000463426	GRAPL	Q8TC17	118 aa	Predicted RBP	32.73	■■■□□ 2.83
CUL4A-205	ENST00000463426	ZBTB7B	O15156	539 aa	Predicted RBP	32.71	■■■□□ 2.83
CUL4A-205	ENST00000463426	GRIPAP1	Q4V328	841 aa		32.71	■■■□□ 2.83
CUL4A-205	ENST00000463426	CC2D2B	Q6DHV5	1058 aa		32.71	■■■□□ 2.83
CUL4A-205	ENST00000463426	PRPF40B	Q6NWY9	871 aa	Known RBP	32.71	■■■□□ 2.83
CUL4A-205	ENST00000463426	LMBR1L	Q6UX01	489 aa		32.7	■■■□□ 2.83
CUL4A-205	ENST00000463426	KAZALD1	Q96I82	304 aa		32.7	■■■□□ 2.83
CUL4A-205	ENST00000463426	TMX4	Q9H1E5	349 aa	Predicted RBP	32.7	■■■□□ 2.83
CUL4A-205	ENST00000463426	BICC1	Q9H694	974 aa	Known RBP	32.7	■■■□□ 2.83
CUL4A-205	ENST00000463426	COG6	Q9Y2V7	657 aa		32.7	■■■□□ 2.83
CUL4A-205	ENST00000463426	IFIT5	Q13325	482 aa	Known RBP	32.69	■■■□□ 2.82
CUL4A-205	ENST00000463426	BCS1L	Q9Y276	419 aa		32.69	■■■□□ 2.82
CUL4A-205	ENST00000463426	TAF1	P21675	1872 aa		32.69	■■■□□ 2.82
CUL4A-205	ENST00000463426	ANKRD18B	A2A2Z9	1011 aa		32.68	■■■□□ 2.82
CUL4A-205	ENST00000463426	CCDC57	Q2TAC2	916 aa		32.68	■■■□□ 2.82
CUL4A-205	ENST00000463426	GREM2	Q9H772	168 aa		32.68	■■■□□ 2.82
CUL4A-205	ENST00000463426	GRIN3B	O60391	1043 aa		32.67	■■■□□ 2.82
CUL4A-205	ENST00000463426	EPHA10	Q5JZY3	1008 aa		32.67	■■■□□ 2.82
CUL4A-205	ENST00000463426	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.67	■■■□□ 2.82
CUL4A-205	ENST00000463426	LRRFIP2	Q9Y608	721 aa	Known RBP	32.67	■■■□□ 2.82
CUL4A-205	ENST00000463426	LRRC37A	A6NMS7	1700 aa		32.67	■■■□□ 2.82
CUL4A-205	ENST00000463426	ITGA6	P23229	1130 aa		32.66	■■■□□ 2.82
CUL4A-205	ENST00000463426	RPS8	P62241	208 aa	Known RBP	32.66	■■■□□ 2.82
CUL4A-205	ENST00000463426	FAM161A	Q3B820	660 aa		32.66	■■■□□ 2.82
CUL4A-205	ENST00000463426	C20orf194	Q5TEA3	1177 aa		32.66	■■■□□ 2.82
CUL4A-205	ENST00000463426	ANKRD18A	Q8IVF6	992 aa		32.66	■■■□□ 2.82
CUL4A-205	ENST00000463426	CHMP3	Q9Y3E7	222 aa		32.66	■■■□□ 2.82
CUL4A-205	ENST00000463426	PPEF1	O14829	653 aa	Predicted RBP	32.65	■■■□□ 2.82
CUL4A-205	ENST00000463426	MTX1	Q13505	466 aa		32.65	■■■□□ 2.82
CUL4A-205	ENST00000463426	AAMP	Q13685	434 aa		32.65	■■■□□ 2.82
CUL4A-205	ENST00000463426	ANKRD44	Q8N8A2	993 aa		32.65	■■■□□ 2.82
CUL4A-205	ENST00000463426	GPR162	Q16538	588 aa		32.64	■■■□□ 2.82
CUL4A-205	ENST00000463426	SPEF2	Q9C093	1822 aa		32.63	■■■□□ 2.81
CUL4A-205	ENST00000463426	IGHMBP2	P38935	993 aa	Known RBP	32.63	■■■□□ 2.81
CUL4A-205	ENST00000463426	FER1L6	Q2WGJ9	1857 aa		32.63	■■■□□ 2.81
CUL4A-205	ENST00000463426	SP8	Q8IXZ3	490 aa		32.62	■■■□□ 2.81
CUL4A-205	ENST00000463426	ZBTB40	Q9NUA8	1239 aa		32.62	■■■□□ 2.81
CUL4A-205	ENST00000463426	ATP6V0A2	Q9Y487	856 aa		32.62	■■■□□ 2.81
CUL4A-205	ENST00000463426	CCDC93	Q567U6	631 aa		32.61	■■■□□ 2.81
CUL4A-205	ENST00000463426	TAF7L	Q5H9L4	462 aa		32.61	■■■□□ 2.81
CUL4A-205	ENST00000463426	C7orf43	Q8WVR3	580 aa		32.61	■■■□□ 2.81
CUL4A-205	ENST00000463426	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.61	■■■□□ 2.81
CUL4A-205	ENST00000463426	SEC31B	Q9NQW1	1179 aa		32.61	■■■□□ 2.81
CUL4A-205	ENST00000463426	RTKN2	Q8IZC4	609 aa		32.6	■■■□□ 2.81
CUL4A-205	ENST00000463426	PELP1	Q8IZL8	1130 aa	Known RBP	32.6	■■■□□ 2.81
CUL4A-205	ENST00000463426	CELF1	Q92879	486 aa	Known RBP	32.6	■■■□□ 2.81
CUL4A-205	ENST00000463426	MPHOSPH8	Q99549	860 aa		32.6	■■■□□ 2.81
CUL4A-205	ENST00000463426	BSDC1	Q9NW68	430 aa	Predicted RBP	32.6	■■■□□ 2.81
CUL4A-205	ENST00000463426	FBXO3	Q9UK99	471 aa		32.58	■■■□□ 2.81
CUL4A-205	ENST00000463426	C21orf2	O43822	256 aa		32.57	■■■□□ 2.8
CUL4A-205	ENST00000463426	YBX3	P16989	372 aa	Known RBP eCLIP	32.57	■■■□□ 2.8	1e-8	■□□□□ 8.4
CUL4A-205	ENST00000463426	LTBP3	Q9NS15	1303 aa		32.54	■■■□□ 2.8
CUL4A-205	ENST00000463426	SRGAP3	O43295	1099 aa		32.54	■■■□□ 2.8
CUL4A-205	ENST00000463426	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.54	■■■□□ 2.8
CUL4A-205	ENST00000463426	WWC3	Q9ULE0	1092 aa		32.53	■■■□□ 2.8
CUL4A-205	ENST00000463426	SNED1	Q8TER0	1413 aa		32.52	■■■□□ 2.8
CUL4A-205	ENST00000463426	ATP8B2	P98198	1209 aa		32.52	■■■□□ 2.8
CUL4A-205	ENST00000463426	LDHAL6A	Q6ZMR3	332 aa		32.52	■■■□□ 2.8
CUL4A-205	ENST00000463426	ANKRD2	Q9GZV1	360 aa		32.52	■■■□□ 2.8
CUL4A-205	ENST00000463426	COL4A1	P02462	1669 aa		32.52	■■■□□ 2.8
CUL4A-205	ENST00000463426	CHD4	Q14839	1912 aa		32.51	■■■□□ 2.8
CUL4A-205	ENST00000463426		A0A1B0GUL6	1792 aa		32.51	■■■□□ 2.79
CUL4A-205	ENST00000463426	HMMR	O75330	724 aa		32.51	■■■□□ 2.79
CUL4A-205	ENST00000463426	SUPT20H	Q8NEM7	779 aa		32.51	■■■□□ 2.79
CUL4A-205	ENST00000463426	PSMD1	Q99460	953 aa		32.51	■■■□□ 2.79
CUL4A-205	ENST00000463426	COPRS	Q9NQ92	184 aa		32.51	■■■□□ 2.79
CUL4A-205	ENST00000463426	LTBP1	Q14766	1721 aa		32.51	■■■□□ 2.79
CUL4A-205	ENST00000463426	RFX5	P48382	616 aa	Predicted RBP	32.5	■■■□□ 2.79
CUL4A-205	ENST00000463426	CRBN	Q96SW2	442 aa		32.5	■■■□□ 2.79
CUL4A-205	ENST00000463426	CNNM1	Q9NRU3	951 aa		32.5	■■■□□ 2.79
CUL4A-205	ENST00000463426	PODXL2	Q9NZ53	605 aa		32.5	■■■□□ 2.79
CUL4A-205	ENST00000463426	GOLGB1	Q14789	3259 aa	Known RBP	32.49	■■■□□ 2.79

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