RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
SND1-203ENST00000463020 ZIC5Q96T25 663 aa20.69■□□□□ 0.9
SND1-203ENST00000463020 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
SND1-203ENST00000463020 ECE1P42892 770 aa20.67■□□□□ 0.9
SND1-203ENST00000463020 KIAA2012Q0VF49 1180 aa20.67■□□□□ 0.9
SND1-203ENST00000463020 AIMP1Q12904 312 aaKnown RBP20.67■□□□□ 0.9
SND1-203ENST00000463020 DPP8Q6V1X1 898 aaPredicted RBP20.67■□□□□ 0.9
SND1-203ENST00000463020 COPS6Q7L5N1 327 aa20.67■□□□□ 0.9
SND1-203ENST00000463020 PGAP2Q9UHJ9 254 aa20.67■□□□□ 0.9
SND1-203ENST00000463020 TNRC18O15417 2968 aaPredicted RBP20.66■□□□□ 0.9
SND1-203ENST00000463020 NEFMP07197 916 aa20.66■□□□□ 0.9
SND1-203ENST00000463020 SP8Q8IXZ3 490 aa20.66■□□□□ 0.9
SND1-203ENST00000463020 ZNF408Q9H9D4 720 aa20.66■□□□□ 0.9
SND1-203ENST00000463020 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
SND1-203ENST00000463020 LRRC37AA6NMS7 1700 aa20.65■□□□□ 0.9
SND1-203ENST00000463020 CCDC85CA6NKD9 419 aa20.65■□□□□ 0.9
SND1-203ENST00000463020 EGFRP00533 1210 aa20.65■□□□□ 0.9
SND1-203ENST00000463020 RIPK4P57078 832 aa20.65■□□□□ 0.9
SND1-203ENST00000463020 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
SND1-203ENST00000463020 MPNDQ8N594 471 aa20.65■□□□□ 0.9
SND1-203ENST00000463020 DDX60Q8IY21 1712 aaKnown RBP20.64■□□□□ 0.9
SND1-203ENST00000463020 VPS33BQ9H267 617 aa20.64■□□□□ 0.89
SND1-203ENST00000463020 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
SND1-203ENST00000463020 BBOX1O75936 387 aa20.63■□□□□ 0.89
SND1-203ENST00000463020 GRAPQ13588 217 aa20.63■□□□□ 0.89
SND1-203ENST00000463020 SUPT20HQ8NEM7 779 aa20.63■□□□□ 0.89
SND1-203ENST00000463020 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
SND1-203ENST00000463020 TRMT112Q9UI30 125 aaKnown RBP20.63■□□□□ 0.89
SND1-203ENST00000463020 MAP2K2P36507 400 aa20.62■□□□□ 0.89
SND1-203ENST00000463020 TCIRG1Q13488 830 aa20.62■□□□□ 0.89
SND1-203ENST00000463020 BEGAINQ9BUH8 593 aa20.62■□□□□ 0.89
SND1-203ENST00000463020 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
SND1-203ENST00000463020 KCNQ5Q9NR82 932 aa20.62■□□□□ 0.89
SND1-203ENST00000463020 CNOT7Q9UIV1 285 aaKnown RBP20.62■□□□□ 0.89
SND1-203ENST00000463020 TMPOP42166 694 aaKnown RBP20.61■□□□□ 0.89
SND1-203ENST00000463020 SAMD7Q7Z3H4 446 aa20.61■□□□□ 0.89
SND1-203ENST00000463020 USP48Q86UV5 1035 aa20.61■□□□□ 0.89
SND1-203ENST00000463020 MICALL2Q8IY33 904 aa20.61■□□□□ 0.89
SND1-203ENST00000463020 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
SND1-203ENST00000463020 MCOLN1Q9GZU1 580 aa20.61■□□□□ 0.89
SND1-203ENST00000463020 SH3TC1Q8TE82 1336 aa20.6■□□□□ 0.89
SND1-203ENST00000463020 DDX46Q7L014 1031 aaKnown RBP20.6■□□□□ 0.89
SND1-203ENST00000463020 TMX4Q9H1E5 349 aaPredicted RBP20.6■□□□□ 0.89
SND1-203ENST00000463020 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
SND1-203ENST00000463020 RTL9Q8NET4 1388 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 CASP8AP2Q9UKL3 1982 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 CDHR2Q9BYE9 1310 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 PSMD14O00487 310 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 SLC34A2O95436 690 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 CCDC146Q8IYE0 955 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 DBNDD1Q9H9R9 158 aa20.59■□□□□ 0.89
SND1-203ENST00000463020 RGS19P49795 217 aa20.58■□□□□ 0.89
SND1-203ENST00000463020 BRPF1P55201 1214 aaPredicted RBP20.58■□□□□ 0.89
SND1-203ENST00000463020 TNIP1Q15025 636 aa20.58■□□□□ 0.89
SND1-203ENST00000463020 ZC3H15Q8WU90 426 aaKnown RBP20.58■□□□□ 0.89
SND1-203ENST00000463020 FAM89AQ96GI7 184 aa20.58■□□□□ 0.89
SND1-203ENST00000463020 HHIPL1Q96JK4 782 aa20.58■□□□□ 0.89
SND1-203ENST00000463020 POLLQ9UGP5 575 aa20.58■□□□□ 0.89
SND1-203ENST00000463020 ADM5C9JUS6 153 aa20.57■□□□□ 0.88
SND1-203ENST00000463020 ATP5J2-PTCD1G3V325 749 aa20.57■□□□□ 0.88
SND1-203ENST00000463020 RIMBP2O15034 1052 aa20.57■□□□□ 0.88
SND1-203ENST00000463020 GPSM2P81274 684 aa20.57■□□□□ 0.88
SND1-203ENST00000463020 TBC1D10BQ4KMP7 808 aaPredicted RBP20.57■□□□□ 0.88
SND1-203ENST00000463020 HSP90AB3PQ58FF7 597 aa20.57■□□□□ 0.88
SND1-203ENST00000463020 CDC37L1Q7L3B6 337 aa20.57■□□□□ 0.88
SND1-203ENST00000463020 ASTN2O75129 1339 aaPredicted RBP20.56■□□□□ 0.88
SND1-203ENST00000463020 FAM155AB1AL88 458 aaPredicted RBP20.56■□□□□ 0.88
SND1-203ENST00000463020 CHL1O00533 1208 aa20.56■□□□□ 0.88
SND1-203ENST00000463020 NEUROD2Q15784 382 aa20.56■□□□□ 0.88
SND1-203ENST00000463020 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
SND1-203ENST00000463020 BABAM1Q9NWV8 329 aa20.56■□□□□ 0.88
SND1-203ENST00000463020 TRIM35Q9UPQ4 493 aa20.56■□□□□ 0.88
SND1-203ENST00000463020 HUNKP57058 714 aa20.55■□□□□ 0.88
SND1-203ENST00000463020 MLLT1Q03111 559 aaPredicted RBP20.55■□□□□ 0.88
SND1-203ENST00000463020 DOK7Q18PE1 504 aa20.55■□□□□ 0.88
SND1-203ENST00000463020 ISCA1Q9BUE6 129 aa20.55■□□□□ 0.88
SND1-203ENST00000463020 SCN9AQ15858 1988 aa20.54■□□□□ 0.88
SND1-203ENST00000463020 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
SND1-203ENST00000463020 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
SND1-203ENST00000463020 H7C1D1 291 aa20.53■□□□□ 0.88
SND1-203ENST00000463020 SF3B3Q15393 1217 aaKnown RBP20.53■□□□□ 0.88
SND1-203ENST00000463020 WASHC4Q2M389 1173 aa20.53■□□□□ 0.88
SND1-203ENST00000463020 RBM26Q5T8P6 1007 aaKnown RBP20.53■□□□□ 0.88
SND1-203ENST00000463020 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
SND1-203ENST00000463020 ECE2O60344 883 aa20.52■□□□□ 0.88
SND1-203ENST00000463020 DGKZQ13574 1117 aa20.52■□□□□ 0.88
SND1-203ENST00000463020 PLBD2Q8NHP8 589 aa20.52■□□□□ 0.88
SND1-203ENST00000463020 DPF2Q92785 391 aa20.52■□□□□ 0.88
SND1-203ENST00000463020 CA12O43570 354 aa20.51■□□□□ 0.87
SND1-203ENST00000463020 HDGFL1Q5TGJ6 251 aa20.51■□□□□ 0.87
SND1-203ENST00000463020 KRT26Q7Z3Y9 468 aa20.51■□□□□ 0.87
SND1-203ENST00000463020 CFAP44Q96MT7 982 aa20.51■□□□□ 0.87
SND1-203ENST00000463020 POLR2AP24928 1970 aaKnown RBP20.5■□□□□ 0.87
SND1-203ENST00000463020 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
SND1-203ENST00000463020 NOGQ13253 232 aa20.5■□□□□ 0.87
SND1-203ENST00000463020 ANKRD13DQ6ZTN6 518 aa20.5■□□□□ 0.87
SND1-203ENST00000463020 TBC1D16Q8TBP0 767 aa20.5■□□□□ 0.87
SND1-203ENST00000463020 SEC31BQ9NQW1 1179 aa20.5■□□□□ 0.87
SND1-203ENST00000463020 RGMBQ6NW40 437 aa20.49■□□□□ 0.87
SND1-203ENST00000463020 TMC4Q7Z404 712 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms