RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 MRPL50Q8N5N7 158 aaKnown RBP24■■□□□ 1.43
COL9A3-203ENST00000462700 TMX4Q9H1E5 349 aaPredicted RBP24■■□□□ 1.43
COL9A3-203ENST00000462700 KDM2BQ8NHM5 1336 aa24■■□□□ 1.43
COL9A3-203ENST00000462700 SP8Q8IXZ3 490 aa23.99■■□□□ 1.43
COL9A3-203ENST00000462700 SSH1Q8WYL5 1049 aa23.99■■□□□ 1.43
COL9A3-203ENST00000462700 CCDC88AQ3V6T2 1871 aa23.98■■□□□ 1.43
COL9A3-203ENST00000462700 H7C1W4 665 aa23.98■■□□□ 1.43
COL9A3-203ENST00000462700 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
COL9A3-203ENST00000462700 BEND3Q5T5X7 828 aa23.98■■□□□ 1.43
COL9A3-203ENST00000462700 TMC4Q7Z404 712 aa23.98■■□□□ 1.43
COL9A3-203ENST00000462700 CELF1Q92879 486 aaKnown RBP23.98■■□□□ 1.43
COL9A3-203ENST00000462700 NMRK2Q9NPI5 230 aa23.98■■□□□ 1.43
COL9A3-203ENST00000462700 GLTPD2A6NH11 291 aa23.97■■□□□ 1.43
COL9A3-203ENST00000462700 KIF3CO14782 793 aa23.97■■□□□ 1.43
COL9A3-203ENST00000462700 COL4A1P02462 1669 aa23.97■■□□□ 1.43
COL9A3-203ENST00000462700 CT47B1P0C2W7 299 aaPredicted RBP23.97■■□□□ 1.43
COL9A3-203ENST00000462700 IARSP41252 1262 aaKnown RBP23.97■■□□□ 1.43
COL9A3-203ENST00000462700 CCDC152Q4G0S7 254 aa23.97■■□□□ 1.43
COL9A3-203ENST00000462700 UBE3BQ7Z3V4 1068 aa23.97■■□□□ 1.43
COL9A3-203ENST00000462700 DICER1Q9UPY3 1922 aaKnown RBP23.96■■□□□ 1.43
COL9A3-203ENST00000462700 ALDH1L2Q3SY69 923 aa23.96■■□□□ 1.43
COL9A3-203ENST00000462700 CASP7P55210 303 aa23.95■■□□□ 1.42
COL9A3-203ENST00000462700 CTSWP56202 376 aa23.95■■□□□ 1.42
COL9A3-203ENST00000462700 BCL2L13Q9BXK5 485 aa23.95■■□□□ 1.42
COL9A3-203ENST00000462700 SEC31BQ9NQW1 1179 aa23.95■■□□□ 1.42
COL9A3-203ENST00000462700 PTPRCP08575 1304 aa23.94■■□□□ 1.42
COL9A3-203ENST00000462700 CCDC85AQ96PX6 553 aaPredicted RBP23.94■■□□□ 1.42
COL9A3-203ENST00000462700 TAF1P21675 1872 aa23.94■■□□□ 1.42
COL9A3-203ENST00000462700 LRRC37AA6NMS7 1700 aa23.93■■□□□ 1.42
COL9A3-203ENST00000462700 C1QTNF8P60827 252 aa23.93■■□□□ 1.42
COL9A3-203ENST00000462700 RPS8P62241 208 aaKnown RBP23.93■■□□□ 1.42
COL9A3-203ENST00000462700 DPY19L2Q6NUT2 758 aa23.93■■□□□ 1.42
COL9A3-203ENST00000462700 SLC4A10Q6U841 1118 aa23.93■■□□□ 1.42
COL9A3-203ENST00000462700 DPP8Q6V1X1 898 aaPredicted RBP23.93■■□□□ 1.42
COL9A3-203ENST00000462700 MPNDQ8N594 471 aa23.93■■□□□ 1.42
COL9A3-203ENST00000462700 RTFDC1Q9BY42 306 aaPredicted RBP23.93■■□□□ 1.42
COL9A3-203ENST00000462700 TTLL11Q8NHH1 800 aa23.92■■□□□ 1.42
COL9A3-203ENST00000462700 PLA2G12BQ9BX93 195 aa23.92■■□□□ 1.42
COL9A3-203ENST00000462700 SMC4Q9NTJ3 1288 aa23.92■■□□□ 1.42
COL9A3-203ENST00000462700 SUPT20HQ8NEM7 779 aa23.91■■□□□ 1.42
COL9A3-203ENST00000462700 SRCIN1Q9C0H9 1055 aa23.91■■□□□ 1.42
COL9A3-203ENST00000462700 RRAGCQ9HB90 399 aa23.91■■□□□ 1.42
COL9A3-203ENST00000462700 COL4A5P29400 1685 aa23.91■■□□□ 1.42
COL9A3-203ENST00000462700 ALDH1L1O75891 902 aa23.9■■□□□ 1.42
COL9A3-203ENST00000462700 GREM2Q9H772 168 aa23.9■■□□□ 1.42
COL9A3-203ENST00000462700 RTL9Q8NET4 1388 aa23.9■■□□□ 1.42
COL9A3-203ENST00000462700 FZD9O00144 591 aa23.89■■□□□ 1.41
COL9A3-203ENST00000462700 LARGE2Q8N3Y3 721 aa23.89■■□□□ 1.41
COL9A3-203ENST00000462700 JDP2Q8WYK2 163 aa23.89■■□□□ 1.41
COL9A3-203ENST00000462700 VPS33BQ9H267 617 aa23.89■■□□□ 1.41
COL9A3-203ENST00000462700 DUOX1Q9NRD9 1551 aa23.89■■□□□ 1.41
COL9A3-203ENST00000462700 ZNF541Q9H0D2 1346 aa23.88■■□□□ 1.41
COL9A3-203ENST00000462700 GRM8O00222 908 aa23.88■■□□□ 1.41
COL9A3-203ENST00000462700 PPIP5K2O43314 1243 aa23.88■■□□□ 1.41
COL9A3-203ENST00000462700 DDNO94850 711 aaPredicted RBP23.88■■□□□ 1.41
COL9A3-203ENST00000462700 AOC3Q16853 763 aa23.88■■□□□ 1.41
COL9A3-203ENST00000462700 ANKRD18AQ8IVF6 992 aa23.88■■□□□ 1.41
COL9A3-203ENST00000462700 WDR90Q96KV7 1748 aa23.87■■□□□ 1.41
COL9A3-203ENST00000462700 GPSM2P81274 684 aa23.87■■□□□ 1.41
COL9A3-203ENST00000462700 CDC5LQ99459 802 aaKnown RBP23.87■■□□□ 1.41
COL9A3-203ENST00000462700 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
COL9A3-203ENST00000462700 CSF1RP07333 972 aa23.86■■□□□ 1.41
COL9A3-203ENST00000462700 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
COL9A3-203ENST00000462700 BRPF1P55201 1214 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-203ENST00000462700 C9orf78Q9NZ63 289 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-203ENST00000462700 MYH3P11055 1940 aa23.86■■□□□ 1.41
COL9A3-203ENST00000462700 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
COL9A3-203ENST00000462700 TOMM70O94826 608 aa23.85■■□□□ 1.41
COL9A3-203ENST00000462700 VEGFAP15692 232 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-203ENST00000462700 KIAA2012Q0VF49 1180 aa23.85■■□□□ 1.41
COL9A3-203ENST00000462700 NIM1KQ8IY84 436 aa23.85■■□□□ 1.41
COL9A3-203ENST00000462700 LTBP1Q14766 1721 aa23.84■■□□□ 1.41
COL9A3-203ENST00000462700 POTECB2RU33 542 aa23.84■■□□□ 1.41
COL9A3-203ENST00000462700 FOXO4P98177 505 aa23.84■■□□□ 1.41
COL9A3-203ENST00000462700 FAM161AQ3B820 660 aa23.84■■□□□ 1.41
COL9A3-203ENST00000462700 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
COL9A3-203ENST00000462700 ITGA6P23229 1130 aa23.83■■□□□ 1.41
COL9A3-203ENST00000462700 EIF6P56537 245 aaKnown RBP23.83■■□□□ 1.41
COL9A3-203ENST00000462700 L3MBTL3Q96JM7 780 aaPredicted RBP23.83■■□□□ 1.41
COL9A3-203ENST00000462700 PODXL2Q9NZ53 605 aa23.83■■□□□ 1.41
COL9A3-203ENST00000462700 POLLQ9UGP5 575 aa23.83■■□□□ 1.41
COL9A3-203ENST00000462700 NOB1Q9ULX3 412 aaKnown RBP23.83■■□□□ 1.41
COL9A3-203ENST00000462700 BSDC1Q9NW68 430 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-203ENST00000462700 UTYO14607 1347 aa23.82■■□□□ 1.4
COL9A3-203ENST00000462700 C6orf229H3BNL8 230 aa23.81■■□□□ 1.4
COL9A3-203ENST00000462700 EPHA10Q5JZY3 1008 aa23.81■■□□□ 1.4
COL9A3-203ENST00000462700 GPC2Q8N158 579 aa23.81■■□□□ 1.4
COL9A3-203ENST00000462700 TBC1D16Q8TBP0 767 aa23.81■■□□□ 1.4
COL9A3-203ENST00000462700 RBM46Q8TBY0 533 aaKnown RBP23.81■■□□□ 1.4
COL9A3-203ENST00000462700 ANKIB1Q9P2G1 1089 aa23.81■■□□□ 1.4
COL9A3-203ENST00000462700 NBPF7P0C2Y1 421 aaPredicted RBP23.8■■□□□ 1.4
COL9A3-203ENST00000462700 IGHMBP2P38935 993 aaKnown RBP23.8■■□□□ 1.4
COL9A3-203ENST00000462700 WASHC4Q2M389 1173 aa23.8■■□□□ 1.4
COL9A3-203ENST00000462700 ZNRF3Q9ULT6 936 aa23.8■■□□□ 1.4
COL9A3-203ENST00000462700 KIF16BQ96L93 1317 aa23.8■■□□□ 1.4
COL9A3-203ENST00000462700 LMBR1LQ6UX01 489 aa23.79■■□□□ 1.4
COL9A3-203ENST00000462700 SUCLG2Q96I99 432 aa23.79■■□□□ 1.4
COL9A3-203ENST00000462700 EYA3Q99504 573 aa23.79■■□□□ 1.4
COL9A3-203ENST00000462700 API5Q9BZZ5 524 aaKnown RBP23.79■■□□□ 1.4
COL9A3-203ENST00000462700 GGA1Q9UJY5 639 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms