RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 PTPN12Q05209 780 aaKnown RBP15.04■□□□□ -0
COL4A6-204ENST00000461897 MCTP1Q6DN14 999 aa15.04■□□□□ -0
COL4A6-204ENST00000461897 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
COL4A6-204ENST00000461897 DZIP3Q86Y13 1208 aaKnown RBP15.04■□□□□ -0
COL4A6-204ENST00000461897 SIL1Q9H173 461 aa15.04■□□□□ -0
COL4A6-204ENST00000461897 TBC1D2BQ9UPU7 963 aa15.04■□□□□ -0
COL4A6-204ENST00000461897 PKP1Q13835 747 aa15.03■□□□□ -0
COL4A6-204ENST00000461897 HS1BP3Q53T59 392 aa15.03■□□□□ -0
COL4A6-204ENST00000461897 ZGPATQ8N5A5 531 aaKnown RBP15.03■□□□□ -0
COL4A6-204ENST00000461897 PI4K2BQ8TCG2 481 aa15.03■□□□□ -0
COL4A6-204ENST00000461897 INTS4Q96HW7 963 aaKnown RBP15.03■□□□□ -0
COL4A6-204ENST00000461897 USP42Q9H9J4 1324 aaKnown RBP15.03■□□□□ -0
COL4A6-204ENST00000461897 ERVV-1B6SEH8 477 aa15.03■□□□□ -0
COL4A6-204ENST00000461897 G3BP1Q13283 466 aaKnown RBP eCLIP15.03■□□□□ -0
COL4A6-204ENST00000461897 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
COL4A6-204ENST00000461897 CLASRPQ8N2M8 674 aaKnown RBP15.03■□□□□ -0
COL4A6-204ENST00000461897 PCCAP05165 728 aaPredicted RBP15.02■□□□□ -0
COL4A6-204ENST00000461897 HSP90AB3PQ58FF7 597 aa15.02■□□□□ -0
COL4A6-204ENST00000461897 NLRP10Q86W26 655 aa15.02■□□□□ -0
COL4A6-204ENST00000461897 BCORQ6W2J9 1755 aa15.02□□□□□ -0.01
COL4A6-204ENST00000461897 MCCP23508 829 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 GPTP24298 496 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 CHMLP26374 656 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 ZBTB38Q8NAP3 1195 aaPredicted RBP15.01□□□□□ -0.01
COL4A6-204ENST00000461897 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 TMX3Q96JJ7 454 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 LY75O60449 1722 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 BRD1O95696 1058 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 FAM89AQ96GI7 184 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 PDLIM2Q96JY6 352 aa15.01□□□□□ -0.01
COL4A6-204ENST00000461897 UBN2Q6ZU65 1347 aa15□□□□□ -0.01
COL4A6-204ENST00000461897 KCNQ4P56696 695 aa15□□□□□ -0.01
COL4A6-204ENST00000461897 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
COL4A6-204ENST00000461897 ANP32BQ92688 251 aaKnown RBP15□□□□□ -0.01
COL4A6-204ENST00000461897 EAF2Q96CJ1 260 aaPredicted RBP15□□□□□ -0.01
COL4A6-204ENST00000461897 QTRT2Q9H974 415 aaKnown RBP15□□□□□ -0.01
COL4A6-204ENST00000461897 CHMP3Q9Y3E7 222 aa15□□□□□ -0.01
COL4A6-204ENST00000461897 MYH3P11055 1940 aa15□□□□□ -0.01
COL4A6-204ENST00000461897 TTC41PQ6P2S7 1318 aa15□□□□□ -0.01
COL4A6-204ENST00000461897 AACSQ86V21 672 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 ZSCAN30Q86W11 494 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 ZNF34Q8IZ26 560 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 GPT2Q8TD30 523 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 PLA2G12BQ9BX93 195 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 CDHR2Q9BYE9 1310 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 MBD3O95983 291 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 NEK4P51957 841 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 SYNE4Q8N205 404 aa14.99□□□□□ -0.01
COL4A6-204ENST00000461897 TLR7Q9NYK1 1049 aaKnown RBP14.99□□□□□ -0.01
COL4A6-204ENST00000461897 TAF1LQ8IZX4 1826 aa14.98□□□□□ -0.01
COL4A6-204ENST00000461897 TRIM6-TRIM34B2RNG4 842 aa14.98□□□□□ -0.01
COL4A6-204ENST00000461897 IFIT2P09913 472 aaKnown RBP14.98□□□□□ -0.01
COL4A6-204ENST00000461897 NAP1L5Q96NT1 182 aaPredicted RBP14.98□□□□□ -0.01
COL4A6-204ENST00000461897 CNTNAP4Q9C0A0 1308 aa14.98□□□□□ -0.01
COL4A6-204ENST00000461897 PRPF40AO75400 957 aaKnown RBP14.97□□□□□ -0.01
COL4A6-204ENST00000461897 RILPL2Q969X0 211 aa14.97□□□□□ -0.01
COL4A6-204ENST00000461897 ECHDC1Q9NTX5 307 aa14.97□□□□□ -0.01
COL4A6-204ENST00000461897 SCN7AQ01118 1682 aa14.97□□□□□ -0.01
COL4A6-204ENST00000461897 GLRX3O76003 335 aaKnown RBP14.97□□□□□ -0.01
COL4A6-204ENST00000461897 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-204ENST00000461897 TFCP2Q12800 502 aa14.97□□□□□ -0.01
COL4A6-204ENST00000461897 LRSAM1Q6UWE0 723 aa14.97□□□□□ -0.01
COL4A6-204ENST00000461897 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
COL4A6-204ENST00000461897 CCDC8Q9H0W5 538 aaPredicted RBP14.97□□□□□ -0.01
COL4A6-204ENST00000461897 MAP4K4O95819 1239 aaPredicted RBP14.96□□□□□ -0.01
COL4A6-204ENST00000461897 CSF1RP07333 972 aa14.96□□□□□ -0.01
COL4A6-204ENST00000461897 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
COL4A6-204ENST00000461897 ZNF594Q96JF6 807 aaPredicted RBP14.96□□□□□ -0.01
COL4A6-204ENST00000461897 RBSNQ9H1K0 784 aa14.96□□□□□ -0.01
COL4A6-204ENST00000461897 TRMT112Q9UI30 125 aaKnown RBP14.96□□□□□ -0.01
COL4A6-204ENST00000461897 PALD1Q9ULE6 856 aa14.96□□□□□ -0.01
COL4A6-204ENST00000461897 TNNI3KQ59H18 835 aa14.95□□□□□ -0.02
COL4A6-204ENST00000461897 FPGT-TNNI3KV9GXZ4 949 aa14.95□□□□□ -0.02
COL4A6-204ENST00000461897 HSPA4P34932 840 aa14.95□□□□□ -0.02
COL4A6-204ENST00000461897 TMEM63CQ9P1W3 806 aa14.95□□□□□ -0.02
COL4A6-204ENST00000461897 DDX60Q8IY21 1712 aaKnown RBP14.94□□□□□ -0.02
COL4A6-204ENST00000461897 LAMB2P55268 1798 aa14.94□□□□□ -0.02
COL4A6-204ENST00000461897 IRS4O14654 1257 aaPredicted RBP14.94□□□□□ -0.02
COL4A6-204ENST00000461897 TERF1P54274 439 aa14.94□□□□□ -0.02
COL4A6-204ENST00000461897 LRRC24Q50LG9 513 aa14.94□□□□□ -0.02
COL4A6-204ENST00000461897 TTLL11Q8NHH1 800 aa14.94□□□□□ -0.02
COL4A6-204ENST00000461897 UBE2Q2Q8WVN8 375 aa14.94□□□□□ -0.02
COL4A6-204ENST00000461897 CCDC85AQ96PX6 553 aaPredicted RBP14.94□□□□□ -0.02
COL4A6-204ENST00000461897 DBNLQ9UJU6 430 aaKnown RBP14.94□□□□□ -0.02
COL4A6-204ENST00000461897 CCNL1Q9UK58 526 aaPredicted RBP14.94□□□□□ -0.02
COL4A6-204ENST00000461897 EYA2O00167 538 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 CIAO1O76071 339 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 TPM2P07951 284 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 NCLP19338 710 aaKnown RBP14.93□□□□□ -0.02
COL4A6-204ENST00000461897 CTSWP56202 376 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 CCDC57Q2TAC2 916 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 SUSD4Q5VX71 490 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 CNTROBQ8N137 903 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 PUS3Q9BZE2 481 aaKnown RBP14.93□□□□□ -0.02
COL4A6-204ENST00000461897 ANO2Q9NQ90 1003 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 C4BP0C0L5 1744 aa14.93□□□□□ -0.02
COL4A6-204ENST00000461897 IL15P40933 162 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms