RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
NCL-207ENST00000461347 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
NCL-207ENST00000461347 NEMFO60524 1076 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 CAVIN2O95810 425 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
NCL-207ENST00000461347 TTC6Q86TZ1 520 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 XAGE3Q8WTP9 111 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 MED14O60244 1454 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 ABCC3O15438 1527 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 ARHGEF40Q8TER5 1519 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 CHST3Q7LGC8 479 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 SMAP1Q8IYB5 467 aaPredicted RBP16.87■□□□□ 0.29
NCL-207ENST00000461347 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 ATP7BP35670 1465 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 URI1O94763 535 aaPredicted RBP16.87■□□□□ 0.29
NCL-207ENST00000461347 LRMPQ12912 555 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 SETBP1Q9Y6X0 1596 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 NDUFB9Q9Y6M9 179 aa16.87■□□□□ 0.29
NCL-207ENST00000461347 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 CCP110O43303 1012 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 SLC3A2P08195 630 aaKnown RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 IMMTQ16891 758 aaKnown RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 CCDC57Q2TAC2 916 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 EDC3Q96F86 508 aaKnown RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 LSG1Q9H089 658 aaKnown RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 KCNQ3O43525 872 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 SMTNL1A8MU46 457 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 KIF2AO00139 706 aaPredicted RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 TULP1O00294 542 aaPredicted RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 JAK2O60674 1132 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 CCDC129Q6ZRS4 1044 aa16.86■□□□□ 0.29
NCL-207ENST00000461347 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
NCL-207ENST00000461347 ERICH2A1L162 156 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 LARGE1O95461 756 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 SNW1Q13573 536 aaKnown RBP16.85■□□□□ 0.29
NCL-207ENST00000461347 CDK12Q9NYV4 1490 aaPredicted RBP16.85■□□□□ 0.29
NCL-207ENST00000461347 PLEKHG3A1L390 1219 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 RPS6KB1P23443 525 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 ANKRD13DQ6ZTN6 518 aa16.85■□□□□ 0.29
NCL-207ENST00000461347 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
NCL-207ENST00000461347 APOBRQ0VD83 1088 aa16.84■□□□□ 0.29
NCL-207ENST00000461347 TSR1Q2NL82 804 aaKnown RBP16.84■□□□□ 0.29
NCL-207ENST00000461347 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
NCL-207ENST00000461347 EPB41L2O43491 1005 aaKnown RBP16.84■□□□□ 0.29
NCL-207ENST00000461347 GSDMDP57764 484 aa16.84■□□□□ 0.29
NCL-207ENST00000461347 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
NCL-207ENST00000461347 AK9Q5TCS8 1911 aa16.83■□□□□ 0.29
NCL-207ENST00000461347 MCMDC2Q4G0Z9 681 aa16.83■□□□□ 0.29
NCL-207ENST00000461347 TBC1D2BQ9UPU7 963 aa16.83■□□□□ 0.29
NCL-207ENST00000461347 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
NCL-207ENST00000461347 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
NCL-207ENST00000461347 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
NCL-207ENST00000461347 ZNF75DP51815 510 aa16.83■□□□□ 0.28
NCL-207ENST00000461347 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
NCL-207ENST00000461347 TM6SF1Q9BZW5 370 aa16.83■□□□□ 0.28
NCL-207ENST00000461347 CNNM1Q9NRU3 951 aa16.83■□□□□ 0.28
NCL-207ENST00000461347 ARHGEF10O15013 1369 aa16.83■□□□□ 0.28
NCL-207ENST00000461347 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 EIF4A1P60842 406 aaKnown RBP16.82■□□□□ 0.28
NCL-207ENST00000461347 PPLO60437 1756 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
NCL-207ENST00000461347 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 TMCO3Q6UWJ1 677 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
NCL-207ENST00000461347 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 CLSTN2Q9H4D0 955 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
NCL-207ENST00000461347 MRPS27Q92552 414 aaKnown RBP16.82■□□□□ 0.28
NCL-207ENST00000461347 ERCC4Q92889 916 aaPredicted RBP16.82■□□□□ 0.28
NCL-207ENST00000461347 A0A0D9SFI3 127 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 EVA1CP58658 441 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 ANKRD20A12PQ8NF67 263 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
NCL-207ENST00000461347 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
NCL-207ENST00000461347 HSP90AA4PQ58FG1 418 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 CCDC82Q8N4S0 544 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
NCL-207ENST00000461347 TFCP2Q12800 502 aa16.81■□□□□ 0.28
NCL-207ENST00000461347 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.81■□□□□ 0.28
NCL-207ENST00000461347 POLR3GO15318 223 aaPredicted RBP16.8■□□□□ 0.28
NCL-207ENST00000461347 NR1I2O75469 434 aa16.8■□□□□ 0.28
NCL-207ENST00000461347 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
NCL-207ENST00000461347 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
NCL-207ENST00000461347 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
NCL-207ENST00000461347 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
NCL-207ENST00000461347 PREX1Q8TCU6 1659 aa16.8■□□□□ 0.28
NCL-207ENST00000461347 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
NCL-207ENST00000461347 ATF3P18847 181 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 NRBP1Q9UHY1 535 aa16.79■□□□□ 0.28
NCL-207ENST00000461347 MYOM1P52179 1685 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms