RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 PDE1AP54750 535 aa20.76■□□□□ 0.91
NELFCD-201ENST00000460601 CCDC57Q2TAC2 916 aa20.76■□□□□ 0.91
NELFCD-201ENST00000460601 AKT1S1Q96B36 256 aa20.76■□□□□ 0.91
NELFCD-201ENST00000460601 MX1P20591 662 aa20.75■□□□□ 0.91
NELFCD-201ENST00000460601 ITGA6P23229 1130 aa20.75■□□□□ 0.91
NELFCD-201ENST00000460601 GYS1P13807 737 aa20.75■□□□□ 0.91
NELFCD-201ENST00000460601 C3orf67Q6ZVT6 689 aa20.75■□□□□ 0.91
NELFCD-201ENST00000460601 ATG9AQ7Z3C6 839 aa20.75■□□□□ 0.91
NELFCD-201ENST00000460601 RBM19Q9Y4C8 960 aaKnown RBP20.75■□□□□ 0.91
NELFCD-201ENST00000460601 GOLGB1Q14789 3259 aaKnown RBP20.74■□□□□ 0.91
NELFCD-201ENST00000460601 TFCP2Q12800 502 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 NFIXQ14938 502 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 DEFB132Q7Z7B7 95 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 ABCC12Q96J65 1359 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 TUBGCP6Q96RT7 1819 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 IFIT5Q13325 482 aaKnown RBP20.74■□□□□ 0.91
NELFCD-201ENST00000460601 BMP2KLQ5H9B9 411 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 TTC22Q5TAA0 569 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 ERC1Q8IUD2 1116 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 EAF2Q96CJ1 260 aaPredicted RBP20.74■□□□□ 0.91
NELFCD-201ENST00000460601 CAMKK2Q96RR4 588 aa20.74■□□□□ 0.91
NELFCD-201ENST00000460601 TLR7Q9NYK1 1049 aaKnown RBP20.74■□□□□ 0.91
NELFCD-201ENST00000460601 NBPF5PQ86XG9 351 aaPredicted RBP20.73■□□□□ 0.91
NELFCD-201ENST00000460601 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
NELFCD-201ENST00000460601 ANO8Q9HCE9 1232 aaPredicted RBP20.73■□□□□ 0.91
NELFCD-201ENST00000460601 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
NELFCD-201ENST00000460601 SEC24BO95487 1268 aa20.72■□□□□ 0.91
NELFCD-201ENST00000460601 AACSQ86V21 672 aa20.72■□□□□ 0.91
NELFCD-201ENST00000460601 RGL2O15211 777 aa20.72■□□□□ 0.91
NELFCD-201ENST00000460601 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
NELFCD-201ENST00000460601 COL23A1Q86Y22 540 aaPredicted RBP20.72■□□□□ 0.91
NELFCD-201ENST00000460601 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
NELFCD-201ENST00000460601 SEC31BQ9NQW1 1179 aa20.72■□□□□ 0.91
NELFCD-201ENST00000460601 COL4A1P02462 1669 aa20.71■□□□□ 0.91
NELFCD-201ENST00000460601 MSH5O43196 834 aa20.71■□□□□ 0.91
NELFCD-201ENST00000460601 RGPD3A6NKT7 1758 aaPredicted RBP20.71■□□□□ 0.91
NELFCD-201ENST00000460601 RGPD4Q7Z3J3 1758 aa20.71■□□□□ 0.91
NELFCD-201ENST00000460601 TAF7LQ5H9L4 462 aa20.71■□□□□ 0.91
NELFCD-201ENST00000460601 OSBPL3Q9H4L5 887 aa20.71■□□□□ 0.91
NELFCD-201ENST00000460601 EYA2O00167 538 aa20.7■□□□□ 0.9
NELFCD-201ENST00000460601 LAMB2P55268 1798 aa20.7■□□□□ 0.9
NELFCD-201ENST00000460601 ANKRD18BA2A2Z9 1011 aa20.69■□□□□ 0.9
NELFCD-201ENST00000460601 IFIT2P09913 472 aaKnown RBP20.69■□□□□ 0.9
NELFCD-201ENST00000460601 PNPLA7Q6ZV29 1317 aa20.69■□□□□ 0.9
NELFCD-201ENST00000460601 CARMIL3Q8ND23 1372 aa20.69■□□□□ 0.9
NELFCD-201ENST00000460601 SDSP20132 328 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 PI4K2BQ8TCG2 481 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 STAP2Q9UGK3 403 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 CASZ1Q86V15 1759 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 NPHP1O15259 732 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 MAP4K4O95819 1239 aaPredicted RBP20.68■□□□□ 0.9
NELFCD-201ENST00000460601 TNNI3KQ59H18 835 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 TPTE2Q6XPS3 522 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 FPGT-TNNI3KV9GXZ4 949 aa20.68■□□□□ 0.9
NELFCD-201ENST00000460601 IL15P40933 162 aaPredicted RBP20.67■□□□□ 0.9
NELFCD-201ENST00000460601 NYXQ9GZU5 481 aa20.67■□□□□ 0.9
NELFCD-201ENST00000460601 SF3B2Q13435 895 aaKnown RBP20.66■□□□□ 0.9
NELFCD-201ENST00000460601 CCDC152Q4G0S7 254 aa20.66■□□□□ 0.9
NELFCD-201ENST00000460601 DBNLQ9UJU6 430 aaKnown RBP20.66■□□□□ 0.9
NELFCD-201ENST00000460601 TAF1P21675 1872 aa20.66■□□□□ 0.9
NELFCD-201ENST00000460601 CIAO1O76071 339 aa20.66■□□□□ 0.9
NELFCD-201ENST00000460601 DDR1Q08345 913 aa20.66■□□□□ 0.9
NELFCD-201ENST00000460601 TNRC6CQ9HCJ0 1690 aaKnown RBP20.65■□□□□ 0.9
NELFCD-201ENST00000460601 TIMM10P62072 90 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 RIC1Q4ADV7 1423 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 TM4SF1P30408 202 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 MSL1Q68DK7 614 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 CNBD1Q8NA66 436 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 CNNM1Q9NRU3 951 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 RIPOR2Q9Y4F9 1068 aa20.65■□□□□ 0.9
NELFCD-201ENST00000460601 BAG6P46379 1132 aa20.64■□□□□ 0.89
NELFCD-201ENST00000460601 PRR5LQ6MZQ0 368 aa20.64■□□□□ 0.89
NELFCD-201ENST00000460601 DBNDD2Q9BQY9 259 aa20.64■□□□□ 0.89
NELFCD-201ENST00000460601 SPEF2Q9C093 1822 aa20.64■□□□□ 0.89
NELFCD-201ENST00000460601 SLC15A2Q16348 729 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 SLC10A5Q5PT55 438 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 LRP5O75197 1615 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 SERPINB2P05120 415 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 NEUROD6Q96NK8 337 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 PDGFDQ9GZP0 370 aaPredicted RBP20.63■□□□□ 0.89
NELFCD-201ENST00000460601 ECHDC1Q9NTX5 307 aa20.63■□□□□ 0.89
NELFCD-201ENST00000460601 TRIM6-TRIM34B2RNG4 842 aa20.62■□□□□ 0.89
NELFCD-201ENST00000460601 POLRMTO00411 1230 aaKnown RBP20.62■□□□□ 0.89
NELFCD-201ENST00000460601 HELBQ8NG08 1087 aaPredicted RBP20.62■□□□□ 0.89
NELFCD-201ENST00000460601 RILPL2Q969X0 211 aa20.62■□□□□ 0.89
NELFCD-201ENST00000460601 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
NELFCD-201ENST00000460601 SF3B3Q15393 1217 aaKnown RBP20.62■□□□□ 0.89
NELFCD-201ENST00000460601 METTL24Q5JXM2 366 aa20.62■□□□□ 0.89
NELFCD-201ENST00000460601 NLRP3Q96P20 1036 aa20.62■□□□□ 0.89
NELFCD-201ENST00000460601 CEP126Q9P2H0 1117 aa20.62■□□□□ 0.89
NELFCD-201ENST00000460601 ZNF609O15014 1411 aa20.61■□□□□ 0.89
NELFCD-201ENST00000460601 TTC41PQ6P2S7 1318 aa20.61■□□□□ 0.89
NELFCD-201ENST00000460601 A0A1B0GUL7 405 aa20.61■□□□□ 0.89
NELFCD-201ENST00000460601 SNAP23O00161 211 aa20.61■□□□□ 0.89
NELFCD-201ENST00000460601 HMGB2P26583 209 aaKnown RBP20.61■□□□□ 0.89
NELFCD-201ENST00000460601 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
NELFCD-201ENST00000460601 AOX1Q06278 1338 aa20.61■□□□□ 0.89
NELFCD-201ENST00000460601 VGLL2Q8N8G2 317 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms