RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 PLIN1O60240 522 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 PYGBP11216 843 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 GYS1P13807 737 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 HSP90B1P14625 803 aaKnown RBP9.57□□□□□ -0.88
ABCA4-202ENST00000460514 HLFQ16534 295 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 INTS3Q68E01 1043 aaKnown RBP9.57□□□□□ -0.88
ABCA4-202ENST00000460514 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 AMIGO3Q86WK7 504 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 ITPRIPQ8IWB1 547 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 CWC25Q9NXE8 425 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-202ENST00000460514 DDX19BQ9UMR2 479 aa9.57□□□□□ -0.88
ABCA4-202ENST00000460514 NIP7Q9Y221 180 aaKnown RBP eCLIP9.57□□□□□ -0.88
ABCA4-202ENST00000460514 IBTKQ9P2D0 1353 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-202ENST00000460514 NUP98P52948 1817 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 ANKRD36CQ5JPF3 1778 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 MKRN3Q13064 507 aaKnown RBP9.56□□□□□ -0.88
ABCA4-202ENST00000460514 R3HDM1Q15032 1099 aaKnown RBP9.56□□□□□ -0.88
ABCA4-202ENST00000460514 BEND3Q5T5X7 828 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 ZNF34Q8IZ26 560 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 TMEM57Q8N5G2 664 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 ISCA1Q9BUE6 129 aa9.56□□□□□ -0.88
ABCA4-202ENST00000460514 C9orf78Q9NZ63 289 aaPredicted RBP9.56□□□□□ -0.88
ABCA4-202ENST00000460514 CARMIL3Q8ND23 1372 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 NPHP1O15259 732 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 GNAI3P08754 354 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 CHRM1P11229 460 aaPredicted RBP9.55□□□□□ -0.88
ABCA4-202ENST00000460514 GPTP24298 496 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 AAMPQ13685 434 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 MVPQ14764 893 aaKnown RBP9.55□□□□□ -0.88
ABCA4-202ENST00000460514 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 NLRP10Q86W26 655 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 PANK1Q8TE04 598 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 UTP14AQ9BVJ6 771 aaKnown RBP9.55□□□□□ -0.88
ABCA4-202ENST00000460514 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
ABCA4-202ENST00000460514 N4BP2Q86UW6 1770 aaPredicted RBP9.55□□□□□ -0.88
ABCA4-202ENST00000460514 AFDNP55196 1824 aaKnown RBP9.54□□□□□ -0.88
ABCA4-202ENST00000460514 IGKV5-2P06315 115 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 GTF2E1P29083 439 aaPredicted RBP9.54□□□□□ -0.88
ABCA4-202ENST00000460514 GCKRQ14397 625 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
ABCA4-202ENST00000460514 TPTE2Q6XPS3 522 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 BICDL1Q6ZP65 573 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 NBPF5PQ86XG9 351 aaPredicted RBP9.54□□□□□ -0.88
ABCA4-202ENST00000460514 MTFR1LQ9H019 292 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
ABCA4-202ENST00000460514 GRM8O00222 908 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 RIMBP2O15034 1052 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 PCCAP05165 728 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-202ENST00000460514 UBTFL1P0CB47 393 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-202ENST00000460514 RLBP1P12271 317 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 POLD1P28340 1107 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 TM4SF1P30408 202 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 NFIXQ14938 502 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-202ENST00000460514 TRMT112Q9UI30 125 aaKnown RBP9.53□□□□□ -0.88
ABCA4-202ENST00000460514 TNNQ9UQP3 1299 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
ABCA4-202ENST00000460514 PSDA5PKW4 1024 aaPredicted RBP9.52□□□□□ -0.89
ABCA4-202ENST00000460514 SERPINB2P05120 415 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 MMP10P09238 476 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 ST5P78524 1137 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 C20orf194Q5TEA3 1177 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 SUSD4Q5VX71 490 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 CNBD1Q8NA66 436 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 CASZ1Q86V15 1759 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 UTYO14607 1347 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 UBN2Q6ZU65 1347 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 CDHR2Q9BYE9 1310 aa9.52□□□□□ -0.89
ABCA4-202ENST00000460514 COL24A1Q17RW2 1714 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 H7C1W4 665 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
ABCA4-202ENST00000460514 ZBTB7AO95365 584 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 NTSR2O95665 410 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 GNAI2P04899 355 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 CRBNQ96SW2 442 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
ABCA4-202ENST00000460514 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-202ENST00000460514 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-202ENST00000460514 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
ABCA4-202ENST00000460514 FAM89AQ96GI7 184 aa9.5□□□□□ -0.89
ABCA4-202ENST00000460514 MEIS3Q99687 375 aa9.5□□□□□ -0.89
ABCA4-202ENST00000460514 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
ABCA4-202ENST00000460514 SPON1Q9HCB6 807 aa9.5□□□□□ -0.89
ABCA4-202ENST00000460514 HCSTQ9UBK5 93 aa9.5□□□□□ -0.89
ABCA4-202ENST00000460514 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
ABCA4-202ENST00000460514 PDE8AO60658 829 aa9.49□□□□□ -0.89
ABCA4-202ENST00000460514 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
ABCA4-202ENST00000460514 NBPF7P0C2Y1 421 aaPredicted RBP9.49□□□□□ -0.89
ABCA4-202ENST00000460514 DDR1Q08345 913 aa9.49□□□□□ -0.89
ABCA4-202ENST00000460514 SLC10A5Q5PT55 438 aa9.49□□□□□ -0.89
ABCA4-202ENST00000460514 PRR5LQ6MZQ0 368 aa9.49□□□□□ -0.89
ABCA4-202ENST00000460514 NLRP3Q96P20 1036 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms