RNA–Protein interactions for RNA: ENST00000460062.6

CSNK2A1-205, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 4

Gene CSNK2A1, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-205ENST00000460062 ABCC4O15439 1325 aa18.97■□□□□ 0.63
CSNK2A1-205ENST00000460062 GRM8O00222 908 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 GRIN3BO60391 1043 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 TRIM27P14373 513 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 ALDH1B1P30837 517 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 ZKSCAN2Q63HK3 967 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 FRAT1Q92837 279 aaPredicted RBP18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 UTYO14607 1347 aa18.96■□□□□ 0.63
CSNK2A1-205ENST00000460062 JARID2Q92833 1246 aaPredicted RBP18.95■□□□□ 0.62
CSNK2A1-205ENST00000460062 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
CSNK2A1-205ENST00000460062 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
CSNK2A1-205ENST00000460062 C9orf78Q9NZ63 289 aaPredicted RBP18.94■□□□□ 0.62
CSNK2A1-205ENST00000460062 WWC3Q9ULE0 1092 aa18.94■□□□□ 0.62
CSNK2A1-205ENST00000460062 CTSWP56202 376 aa18.93■□□□□ 0.62
CSNK2A1-205ENST00000460062 CHD4Q14839 1912 aa18.93■□□□□ 0.62
CSNK2A1-205ENST00000460062 UTRNP46939 3433 aa18.93■□□□□ 0.62
CSNK2A1-205ENST00000460062 TAF1P21675 1872 aa18.92■□□□□ 0.62
CSNK2A1-205ENST00000460062 CCDC152Q4G0S7 254 aa18.92■□□□□ 0.62
CSNK2A1-205ENST00000460062 DDX46Q7L014 1031 aaKnown RBP18.92■□□□□ 0.62
CSNK2A1-205ENST00000460062 RTL9Q8NET4 1388 aa18.92■□□□□ 0.62
CSNK2A1-205ENST00000460062 SOGA3Q5TF21 947 aa18.91■□□□□ 0.62
CSNK2A1-205ENST00000460062 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
CSNK2A1-205ENST00000460062 C7orf43Q8WVR3 580 aa18.91■□□□□ 0.62
CSNK2A1-205ENST00000460062 USP44Q9H0E7 712 aa18.91■□□□□ 0.62
CSNK2A1-205ENST00000460062 FER1L6Q2WGJ9 1857 aa18.9■□□□□ 0.62
CSNK2A1-205ENST00000460062 BBOX1O75936 387 aa18.9■□□□□ 0.62
CSNK2A1-205ENST00000460062 NBPF7P0C2Y1 421 aaPredicted RBP18.9■□□□□ 0.62
CSNK2A1-205ENST00000460062 GRAPQ13588 217 aa18.9■□□□□ 0.62
CSNK2A1-205ENST00000460062 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
CSNK2A1-205ENST00000460062 CSF1RP07333 972 aa18.89■□□□□ 0.61
CSNK2A1-205ENST00000460062 TMC4Q7Z404 712 aa18.89■□□□□ 0.61
CSNK2A1-205ENST00000460062 C21orf2O43822 256 aa18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 MS4A1P11836 297 aa18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 FOXO4P98177 505 aa18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 DZIP1LQ8IYY4 767 aaKnown RBP18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 CLUAP1Q96AJ1 413 aa18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 TNNQ9UQP3 1299 aa18.88■□□□□ 0.61
CSNK2A1-205ENST00000460062 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 SBF1O95248 1867 aa18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 ARHGAP27Q6ZUM4 889 aa18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 HDAC5Q9UQL6 1122 aa18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 ATP6V0A2Q9Y487 856 aa18.87■□□□□ 0.61
CSNK2A1-205ENST00000460062 CAPN15O75808 1086 aa18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 TMEM57Q8N5G2 664 aa18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 KAZALD1Q96I82 304 aa18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 CDC5LQ99459 802 aaKnown RBP18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 GREM2Q9H772 168 aa18.86■□□□□ 0.61
CSNK2A1-205ENST00000460062 SNED1Q8TER0 1413 aa18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 UBTFL1P0CB47 393 aaPredicted RBP18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 EPHA10Q5JZY3 1008 aa18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 CELF1Q92879 486 aaKnown RBP18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 COL4A1P02462 1669 aa18.85■□□□□ 0.61
CSNK2A1-205ENST00000460062 LTBP3Q9NS15 1303 aa18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 GNAI3P08754 354 aa18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 RLBP1P12271 317 aa18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 CCDC85AQ96PX6 553 aaPredicted RBP18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
CSNK2A1-205ENST00000460062 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
CSNK2A1-205ENST00000460062 ANKRD18AQ8IVF6 992 aa18.83■□□□□ 0.6
CSNK2A1-205ENST00000460062 MEIS3Q99687 375 aa18.83■□□□□ 0.6
CSNK2A1-205ENST00000460062 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
CSNK2A1-205ENST00000460062 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.6
CSNK2A1-205ENST00000460062 SPEF2Q9C093 1822 aa18.83■□□□□ 0.6
CSNK2A1-205ENST00000460062 NFKBIEO00221 500 aa18.82■□□□□ 0.6
CSNK2A1-205ENST00000460062 ITGA6P23229 1130 aa18.82■□□□□ 0.6
CSNK2A1-205ENST00000460062 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
CSNK2A1-205ENST00000460062 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
CSNK2A1-205ENST00000460062 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
CSNK2A1-205ENST00000460062 ANKRD18BA2A2Z9 1011 aa18.81■□□□□ 0.6
CSNK2A1-205ENST00000460062 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CSNK2A1-205ENST00000460062 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
CSNK2A1-205ENST00000460062 PANK1Q8TE04 598 aa18.81■□□□□ 0.6
CSNK2A1-205ENST00000460062 PSMD1Q99460 953 aa18.81■□□□□ 0.6
CSNK2A1-205ENST00000460062 TAOK3Q9H2K8 898 aa18.81■□□□□ 0.6
CSNK2A1-205ENST00000460062 PLIN1O60240 522 aa18.8■□□□□ 0.6
CSNK2A1-205ENST00000460062 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
CSNK2A1-205ENST00000460062 ITPRIPQ8IWB1 547 aa18.8■□□□□ 0.6
CSNK2A1-205ENST00000460062 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
CSNK2A1-205ENST00000460062 LTBP1Q14766 1721 aa18.8■□□□□ 0.6
CSNK2A1-205ENST00000460062 IGHMBP2P38935 993 aaKnown RBP18.79■□□□□ 0.6
CSNK2A1-205ENST00000460062 RASSF7Q02833 373 aa18.79■□□□□ 0.6
CSNK2A1-205ENST00000460062 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
CSNK2A1-205ENST00000460062 CHMP3Q9Y3E7 222 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms