RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 JDP2Q8WYK2 163 aa20.76■□□□□ 0.91
CPSF6-203ENST00000456847 CCER2I3L3R5 266 aa20.75■□□□□ 0.91
CPSF6-203ENST00000456847 SF3B3Q15393 1217 aaKnown RBP20.75■□□□□ 0.91
CPSF6-203ENST00000456847 LRRC37AA6NMS7 1700 aa20.75■□□□□ 0.91
CPSF6-203ENST00000456847 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
CPSF6-203ENST00000456847 SP8Q8IXZ3 490 aa20.74■□□□□ 0.91
CPSF6-203ENST00000456847 LARGE2Q8N3Y3 721 aa20.74■□□□□ 0.91
CPSF6-203ENST00000456847 JARID2Q92833 1246 aaPredicted RBP20.74■□□□□ 0.91
CPSF6-203ENST00000456847 MYH3P11055 1940 aa20.74■□□□□ 0.91
CPSF6-203ENST00000456847 ZNF521Q96K83 1311 aa20.74■□□□□ 0.91
CPSF6-203ENST00000456847 DPP8Q6V1X1 898 aaPredicted RBP20.74■□□□□ 0.91
CPSF6-203ENST00000456847 TMC4Q7Z404 712 aa20.73■□□□□ 0.91
CPSF6-203ENST00000456847 SUPT20HQ8NEM7 779 aa20.73■□□□□ 0.91
CPSF6-203ENST00000456847 PPIP5K2O43314 1243 aa20.72■□□□□ 0.91
CPSF6-203ENST00000456847 IGKV5-2P06315 115 aa20.72■□□□□ 0.91
CPSF6-203ENST00000456847 MPNDQ8N594 471 aa20.72■□□□□ 0.91
CPSF6-203ENST00000456847 COL4A5P29400 1685 aa20.72■□□□□ 0.91
CPSF6-203ENST00000456847 SCN4AP35499 1836 aa20.72■□□□□ 0.91
CPSF6-203ENST00000456847 PDE8AO60658 829 aa20.72■□□□□ 0.91
CPSF6-203ENST00000456847 CWF19L2Q2TBE0 894 aaKnown RBP20.72■□□□□ 0.91
CPSF6-203ENST00000456847 CELF1Q92879 486 aaKnown RBP20.72■□□□□ 0.91
CPSF6-203ENST00000456847 EIF6P56537 245 aaKnown RBP20.71■□□□□ 0.91
CPSF6-203ENST00000456847 FSTL1Q12841 308 aa20.71■□□□□ 0.91
CPSF6-203ENST00000456847 CCDC152Q4G0S7 254 aa20.71■□□□□ 0.91
CPSF6-203ENST00000456847 NIM1KQ8IY84 436 aa20.71■□□□□ 0.91
CPSF6-203ENST00000456847 SMC1BQ8NDV3 1235 aa20.71■□□□□ 0.91
CPSF6-203ENST00000456847 CDHR2Q9BYE9 1310 aa20.71■□□□□ 0.91
CPSF6-203ENST00000456847 COL4A1P02462 1669 aa20.71■□□□□ 0.91
CPSF6-203ENST00000456847 NEURL1BA8MQ27 555 aa20.7■□□□□ 0.91
CPSF6-203ENST00000456847 FZD9O00144 591 aa20.7■□□□□ 0.91
CPSF6-203ENST00000456847 AOC3Q16853 763 aa20.7■□□□□ 0.91
CPSF6-203ENST00000456847 DNAAF4Q8WXU2 420 aa20.7■□□□□ 0.91
CPSF6-203ENST00000456847 POTECB2RU33 542 aa20.7■□□□□ 0.9
CPSF6-203ENST00000456847 CCDC85AQ96PX6 553 aaPredicted RBP20.7■□□□□ 0.9
CPSF6-203ENST00000456847 IQCA1LA6NCM1 817 aa20.69■□□□□ 0.9
CPSF6-203ENST00000456847 SPEF2Q9C093 1822 aa20.69■□□□□ 0.9
CPSF6-203ENST00000456847 E9PSI1 815 aa20.68■□□□□ 0.9
CPSF6-203ENST00000456847 GJA3Q9Y6H8 435 aa20.68■□□□□ 0.9
CPSF6-203ENST00000456847 DUOX1Q9NRD9 1551 aa20.68■□□□□ 0.9
CPSF6-203ENST00000456847 L3MBTL3Q96JM7 780 aaPredicted RBP20.68■□□□□ 0.9
CPSF6-203ENST00000456847 RTFDC1Q9BY42 306 aaPredicted RBP20.68■□□□□ 0.9
CPSF6-203ENST00000456847 VPS33BQ9H267 617 aa20.68■□□□□ 0.9
CPSF6-203ENST00000456847 RPS8P62241 208 aaKnown RBP20.67■□□□□ 0.9
CPSF6-203ENST00000456847 UBE3BQ7Z3V4 1068 aa20.67■□□□□ 0.9
CPSF6-203ENST00000456847 SEC31BQ9NQW1 1179 aa20.67■□□□□ 0.9
CPSF6-203ENST00000456847 APLP1P51693 650 aa20.66■□□□□ 0.9
CPSF6-203ENST00000456847 CTSWP56202 376 aa20.66■□□□□ 0.9
CPSF6-203ENST00000456847 GPC2Q8N158 579 aa20.66■□□□□ 0.9
CPSF6-203ENST00000456847 NSFL1CQ9UNZ2 370 aaKnown RBP20.66■□□□□ 0.9
CPSF6-203ENST00000456847 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
CPSF6-203ENST00000456847 F6X3S4 739 aa20.65■□□□□ 0.9
CPSF6-203ENST00000456847 GCKRQ14397 625 aa20.65■□□□□ 0.9
CPSF6-203ENST00000456847 HACL1Q9UJ83 578 aa20.65■□□□□ 0.9
CPSF6-203ENST00000456847 LTBP1Q14766 1721 aa20.64■□□□□ 0.89
CPSF6-203ENST00000456847 C6orf229H3BNL8 230 aa20.64■□□□□ 0.89
CPSF6-203ENST00000456847 GPSM2P81274 684 aa20.64■□□□□ 0.89
CPSF6-203ENST00000456847 KIAA2012Q0VF49 1180 aa20.64■□□□□ 0.89
CPSF6-203ENST00000456847 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
CPSF6-203ENST00000456847 ANKRD18AQ8IVF6 992 aa20.64■□□□□ 0.89
CPSF6-203ENST00000456847 TAF1DQ9H5J8 278 aaPredicted RBP20.64■□□□□ 0.89
CPSF6-203ENST00000456847 H7C1W4 665 aa20.63■□□□□ 0.89
CPSF6-203ENST00000456847 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
CPSF6-203ENST00000456847 EAPPQ56P03 285 aaPredicted RBP20.63■□□□□ 0.89
CPSF6-203ENST00000456847 LMOD1P29536 600 aaPredicted RBP20.63■□□□□ 0.89
CPSF6-203ENST00000456847 CDC5LQ99459 802 aaKnown RBP20.63■□□□□ 0.89
CPSF6-203ENST00000456847 ZNRF3Q9ULT6 936 aa20.63■□□□□ 0.89
CPSF6-203ENST00000456847 POTEIP0CG38 1075 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 POTEJP0CG39 1038 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 EPHX2P34913 555 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 WASHC4Q2M389 1173 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 CHADLQ6NUI6 762 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 TTLL11Q8NHH1 800 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 EYA3Q99504 573 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 RIMBP2O15034 1052 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 GREM2Q9H772 168 aa20.61■□□□□ 0.89
CPSF6-203ENST00000456847 BEND3Q5T5X7 828 aa20.6■□□□□ 0.89
CPSF6-203ENST00000456847 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
CPSF6-203ENST00000456847 CLEC11AQ9Y240 323 aa20.6■□□□□ 0.89
CPSF6-203ENST00000456847 RTL9Q8NET4 1388 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 UFL1O94874 794 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 POLLQ9UGP5 575 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 CIAPIN1Q6FI81 312 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 TBC1D16Q8TBP0 767 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 GPR101Q96P66 508 aaPredicted RBP20.59■□□□□ 0.89
CPSF6-203ENST00000456847 PLA2G12BQ9BX93 195 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 GGA1Q9UJY5 639 aa20.59■□□□□ 0.89
CPSF6-203ENST00000456847 CASP7P55210 303 aa20.58■□□□□ 0.88
CPSF6-203ENST00000456847 CXCL9Q07325 125 aa20.58■□□□□ 0.88
CPSF6-203ENST00000456847 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.88
CPSF6-203ENST00000456847 MIER1Q8N108 512 aa20.58■□□□□ 0.88
CPSF6-203ENST00000456847 RAD17O75943 681 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
CPSF6-203ENST00000456847 DBNDD1Q9H9R9 158 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 XDHP47989 1333 aa20.57■□□□□ 0.88
CPSF6-203ENST00000456847 G3V3G9 751 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms