RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 U2SURPO15042 1029 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 KCNA3P22001 575 aa6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 RSBN1LQ6PCB5 846 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 ARHGAP27Q6ZUM4 889 aa6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 NBPF3Q9H094 633 aa6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 C4AP0C0L4 1744 aa6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
GTF3C3-208ENST00000455546 CICQ96RK0 1608 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 KIF13BQ9NQT8 1826 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 CYP19A1P11511 503 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 CANXP27824 592 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 CHRNA5P30532 468 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 GCGRP47871 477 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 TGFB2P61812 414 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 LSM11P83369 360 aaKnown RBP eCLIP6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 DDR1Q08345 913 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 USPL1Q5W0Q7 1092 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 ADGRD1Q6QNK2 874 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 ANKRD13DQ6ZTN6 518 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 IL17REQ8NFR9 667 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 CCDC87Q9NVE4 849 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 PCDHB15Q9Y5E8 787 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 TJP1Q07157 1748 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 CCDC88AQ3V6T2 1871 aa6.32□□□□□ -1.4
GTF3C3-208ENST00000455546 KIAA1551Q9HCM1 1747 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 ZNF831Q5JPB2 1677 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 PXDNLA1KZ92 1463 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 KCNQ3O43525 872 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 KDM4AO75164 1064 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 ZPR1O75312 459 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 CFHP08603 1231 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 TM4SF1P30408 202 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 RFC5P40937 340 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 DIXDC1Q155Q3 683 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 QPCTQ16769 361 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 BICDL1Q6ZP65 573 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 MRPL50Q8N5N7 158 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 ZFRQ96KR1 1074 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 PHACTR3Q96KR7 559 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 ZBTB1Q9Y2K1 713 aa6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 AFDNP55196 1824 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-208ENST00000455546 SBF1O95248 1867 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 BRCA1P38398 1863 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 USP42Q9H9J4 1324 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 BHMG1C9JSJ3 638 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 POLRMTO00411 1230 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 HOXA2O43364 376 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 MCM6Q14566 821 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 NFIXQ14938 502 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 SLF2Q8IX21 1173 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 CCDC24Q8N4L8 307 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 CLUAP1Q96AJ1 413 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 ZNF496Q96IT1 587 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 ZMYND15Q9H091 742 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 PIM2Q9P1W9 311 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 ZNF330Q9Y3S2 320 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 PLEKHG2Q9H7P9 1386 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 ADAMTS7Q9UKP4 1686 aa6.3□□□□□ -1.4
GTF3C3-208ENST00000455546 SOS1Q07889 1333 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 GNAT3A8MTJ3 354 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 TK2O00142 265 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 SPTLC1O15269 473 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 A1BGP04217 495 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 PRKAR2BP31323 418 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 PIP4K2AP48426 406 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 FLIIQ13045 1269 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 TTC5Q8N0Z6 440 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 NARFQ9UHQ1 456 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 TBC1D2BQ9UPU7 963 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 ADCY9O60503 1353 aa6.29□□□□□ -1.4
GTF3C3-208ENST00000455546 C10orf71Q711Q0 1435 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 ARFGEF1Q9Y6D6 1849 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 PRAMEF22A3QJZ6 481 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 SERPINB2P05120 415 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 FDX1P10109 184 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 PPP2R1AP30153 589 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 SLC4A3P48751 1232 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 TEFQ10587 303 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 FUT2Q10981 343 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 DCTN1Q14203 1278 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 RTL5Q5HYW3 569 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 C9orf131Q5VYM1 1079 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 ZNF790Q6PG37 636 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 LAPTM4BQ86VI4 370 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 LRCH3Q96II8 777 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 NMRK2Q9NPI5 230 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 PCDHGC3Q9UN70 934 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 USP16Q9Y5T5 823 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 KCPQ6ZWJ8 1503 aa6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 COL3A1P02461 1466 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-208ENST00000455546 BTBD11A6QL63 1104 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 HRO43593 1189 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 STARD3NLO95772 234 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 U2AF1L5P0DN76 240 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 BCAMP50895 628 aa6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 EIF5P55010 431 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 U2AF1Q01081 240 aaKnown RBP eCLIP6.27□□□□□ -1.41
GTF3C3-208ENST00000455546 PUS10Q3MIT2 529 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms