RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 CTSWP56202 376 aa18.35■□□□□ 0.53
TRAPPC12-211ENST00000452495 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
TRAPPC12-211ENST00000452495 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC12-211ENST00000452495 HDAC5Q9UQL6 1122 aa18.35■□□□□ 0.53
TRAPPC12-211ENST00000452495 PLIN1O60240 522 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 GNAI3P08754 354 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 KCNA3P22001 575 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 HOXA10P31260 410 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 CNKSR1Q969H4 720 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 PIM2Q9P1W9 311 aa18.34■□□□□ 0.53
TRAPPC12-211ENST00000452495 FER1L6Q2WGJ9 1857 aa18.33■□□□□ 0.53
TRAPPC12-211ENST00000452495 UBTFL1P0CB47 393 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC12-211ENST00000452495 CCDC152Q4G0S7 254 aa18.33■□□□□ 0.52
TRAPPC12-211ENST00000452495 PANK1Q8TE04 598 aa18.33■□□□□ 0.52
TRAPPC12-211ENST00000452495 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.52
TRAPPC12-211ENST00000452495 MVPQ14764 893 aaKnown RBP18.32■□□□□ 0.52
TRAPPC12-211ENST00000452495 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAPPC12-211ENST00000452495 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
TRAPPC12-211ENST00000452495 CRAMP1Q96RY5 1269 aa18.32■□□□□ 0.52
TRAPPC12-211ENST00000452495 MEIS3Q99687 375 aa18.32■□□□□ 0.52
TRAPPC12-211ENST00000452495 COL4A1P02462 1669 aa18.31■□□□□ 0.52
TRAPPC12-211ENST00000452495 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
TRAPPC12-211ENST00000452495 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
TRAPPC12-211ENST00000452495 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
TRAPPC12-211ENST00000452495 TTLL11Q8NHH1 800 aa18.31■□□□□ 0.52
TRAPPC12-211ENST00000452495 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
TRAPPC12-211ENST00000452495 LTBP1Q14766 1721 aa18.3■□□□□ 0.52
TRAPPC12-211ENST00000452495 CSF1RP07333 972 aa18.3■□□□□ 0.52
TRAPPC12-211ENST00000452495 FOXO4P98177 505 aa18.3■□□□□ 0.52
TRAPPC12-211ENST00000452495 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-211ENST00000452495 PRPF40BQ6NWY9 871 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-211ENST00000452495 CHMP4BQ9H444 224 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-211ENST00000452495 GRAPQ13588 217 aa18.29■□□□□ 0.52
TRAPPC12-211ENST00000452495 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-211ENST00000452495 GRAPLQ8TC17 118 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC12-211ENST00000452495 KAZALD1Q96I82 304 aa18.29■□□□□ 0.52
TRAPPC12-211ENST00000452495 CHD4Q14839 1912 aa18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 TMC4Q7Z404 712 aa18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 CDC5LQ99459 802 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 GREM2Q9H772 168 aa18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
TRAPPC12-211ENST00000452495 CCDC88AQ3V6T2 1871 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 GNAI2P04899 355 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 C20orf194Q5TEA3 1177 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 ANKRD44Q8N8A2 993 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 BCS1LQ9Y276 419 aa18.27■□□□□ 0.52
TRAPPC12-211ENST00000452495 SBF1O95248 1867 aa18.26■□□□□ 0.51
TRAPPC12-211ENST00000452495 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
TRAPPC12-211ENST00000452495 PPEF1O14829 653 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-211ENST00000452495 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-211ENST00000452495 SOGA3Q5TF21 947 aa18.26■□□□□ 0.51
TRAPPC12-211ENST00000452495 LRRFIP2Q9Y608 721 aaKnown RBP18.26■□□□□ 0.51
TRAPPC12-211ENST00000452495 BBOX1O75936 387 aa18.25■□□□□ 0.51
TRAPPC12-211ENST00000452495 ITGA6P23229 1130 aa18.25■□□□□ 0.51
TRAPPC12-211ENST00000452495 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
TRAPPC12-211ENST00000452495 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC12-211ENST00000452495 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
TRAPPC12-211ENST00000452495 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
TRAPPC12-211ENST00000452495 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
TRAPPC12-211ENST00000452495 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
TRAPPC12-211ENST00000452495 CCDC57Q2TAC2 916 aa18.24■□□□□ 0.51
TRAPPC12-211ENST00000452495 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
TRAPPC12-211ENST00000452495 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
TRAPPC12-211ENST00000452495 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
TRAPPC12-211ENST00000452495 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 MTX1Q13505 466 aa18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 GPR162Q16538 588 aa18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 CC2D2BQ6DHV5 1058 aa18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 PELP1Q8IZL8 1130 aaKnown RBP18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 CELF1Q92879 486 aaKnown RBP18.23■□□□□ 0.51
TRAPPC12-211ENST00000452495 DUOX1Q9NRD9 1551 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 IGHMBP2P38935 993 aaKnown RBP18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 CCDC93Q567U6 631 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 ATP6V0A2Q9Y487 856 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 TIAM2Q8IVF5 1701 aa18.22■□□□□ 0.51
TRAPPC12-211ENST00000452495 TAF7LQ5H9L4 462 aa18.21■□□□□ 0.51
TRAPPC12-211ENST00000452495 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
TRAPPC12-211ENST00000452495 C21orf2O43822 256 aa18.2■□□□□ 0.5
TRAPPC12-211ENST00000452495 SP8Q8IXZ3 490 aa18.2■□□□□ 0.5
TRAPPC12-211ENST00000452495 BSDC1Q9NW68 430 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC12-211ENST00000452495 RTKN2Q8IZC4 609 aa18.19■□□□□ 0.5
TRAPPC12-211ENST00000452495 MPHOSPH8Q99549 860 aa18.19■□□□□ 0.5
TRAPPC12-211ENST00000452495 C1orf115Q9H7X2 142 aa18.19■□□□□ 0.5
TRAPPC12-211ENST00000452495 LTBP3Q9NS15 1303 aa18.19■□□□□ 0.5
TRAPPC12-211ENST00000452495 ARAP2Q8WZ64 1704 aa18.18■□□□□ 0.5
TRAPPC12-211ENST00000452495 SRGAP3O43295 1099 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1045.9 ms