RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
SGCE-208ENST00000450385 CWC25Q9NXE8 425 aaPredicted RBP20.58■□□□□ 0.89
SGCE-208ENST00000450385 DPP8Q6V1X1 898 aaPredicted RBP20.57■□□□□ 0.88
SGCE-208ENST00000450385 HACL1Q9UJ83 578 aa20.57■□□□□ 0.88
SGCE-208ENST00000450385 CHADLQ6NUI6 762 aa20.56■□□□□ 0.88
SGCE-208ENST00000450385 LDHDQ86WU2 507 aa20.56■□□□□ 0.88
SGCE-208ENST00000450385 NIM1KQ8IY84 436 aa20.56■□□□□ 0.88
SGCE-208ENST00000450385 MYD88Q99836 296 aa20.56■□□□□ 0.88
SGCE-208ENST00000450385 TAF1DQ9H5J8 278 aaPredicted RBP20.56■□□□□ 0.88
SGCE-208ENST00000450385 MYH16Q9H6N6 1097 aa20.56■□□□□ 0.88
SGCE-208ENST00000450385 PDE8AO60658 829 aa20.55■□□□□ 0.88
SGCE-208ENST00000450385 SLC4A2P04920 1241 aa20.55■□□□□ 0.88
SGCE-208ENST00000450385 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
SGCE-208ENST00000450385 PPIP5K2O43314 1243 aa20.54■□□□□ 0.88
SGCE-208ENST00000450385 RPS8P62241 208 aaKnown RBP20.54■□□□□ 0.88
SGCE-208ENST00000450385 CCDC152Q4G0S7 254 aa20.54■□□□□ 0.88
SGCE-208ENST00000450385 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
SGCE-208ENST00000450385 MAP3K2Q9Y2U5 619 aa20.54■□□□□ 0.88
SGCE-208ENST00000450385 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 ZNF541Q9H0D2 1346 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 LRRC37AA6NMS7 1700 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
SGCE-208ENST00000450385 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
SGCE-208ENST00000450385 TAF1P21675 1872 aa20.52■□□□□ 0.88
SGCE-208ENST00000450385 VAMP4O75379 141 aa20.52■□□□□ 0.88
SGCE-208ENST00000450385 EPHX2P34913 555 aa20.52■□□□□ 0.88
SGCE-208ENST00000450385 LMOD1P29536 600 aaPredicted RBP20.51■□□□□ 0.87
SGCE-208ENST00000450385 KLRG1Q96E93 195 aa20.51■□□□□ 0.87
SGCE-208ENST00000450385 TNIP1Q15025 636 aa20.5■□□□□ 0.87
SGCE-208ENST00000450385 AOC3Q16853 763 aa20.5■□□□□ 0.87
SGCE-208ENST00000450385 EYA3Q99504 573 aa20.5■□□□□ 0.87
SGCE-208ENST00000450385 MYH3P11055 1940 aa20.5■□□□□ 0.87
SGCE-208ENST00000450385 IGKV5-2P06315 115 aa20.49■□□□□ 0.87
SGCE-208ENST00000450385 FLIIQ13045 1269 aa20.49■□□□□ 0.87
SGCE-208ENST00000450385 CELF1Q92879 486 aaKnown RBP20.49■□□□□ 0.87
SGCE-208ENST00000450385 PODXL2Q9NZ53 605 aa20.49■□□□□ 0.87
SGCE-208ENST00000450385 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
SGCE-208ENST00000450385 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
SGCE-208ENST00000450385 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
SGCE-208ENST00000450385 JMYQ8N9B5 988 aa20.48■□□□□ 0.87
SGCE-208ENST00000450385 CREBZFQ9NS37 354 aa20.48■□□□□ 0.87
SGCE-208ENST00000450385 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
SGCE-208ENST00000450385 PCNTO95613 3336 aa20.48■□□□□ 0.87
SGCE-208ENST00000450385 NEURL1BA8MQ27 555 aa20.47■□□□□ 0.87
SGCE-208ENST00000450385 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
SGCE-208ENST00000450385 LINS1Q8NG48 757 aa20.47■□□□□ 0.87
SGCE-208ENST00000450385 CDC5LQ99459 802 aaKnown RBP20.47■□□□□ 0.87
SGCE-208ENST00000450385 SALL2Q9Y467 1007 aaPredicted RBP20.47■□□□□ 0.87
SGCE-208ENST00000450385 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
SGCE-208ENST00000450385 COL4A5P29400 1685 aa20.47■□□□□ 0.87
SGCE-208ENST00000450385 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
SGCE-208ENST00000450385 H7C1W4 665 aa20.46■□□□□ 0.87
SGCE-208ENST00000450385 CXCL9Q07325 125 aa20.46■□□□□ 0.87
SGCE-208ENST00000450385 FKBP5Q13451 457 aaPredicted RBP20.46■□□□□ 0.87
SGCE-208ENST00000450385 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
SGCE-208ENST00000450385 ADAMTSL1Q8N6G6 1762 aa20.46■□□□□ 0.87
SGCE-208ENST00000450385 SCNN1DP51172 638 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 EAPPQ56P03 285 aaPredicted RBP20.45■□□□□ 0.86
SGCE-208ENST00000450385 CIAPIN1Q6FI81 312 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 G2E3Q7L622 706 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 ANKRD18AQ8IVF6 992 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 PLA2G12BQ9BX93 195 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 CLEC11AQ9Y240 323 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
SGCE-208ENST00000450385 ITGBL1O95965 494 aaPredicted RBP20.44■□□□□ 0.86
SGCE-208ENST00000450385 CTSWP56202 376 aa20.44■□□□□ 0.86
SGCE-208ENST00000450385 GCKRQ14397 625 aa20.44■□□□□ 0.86
SGCE-208ENST00000450385 ADARB2Q9NS39 739 aaKnown RBP20.44■□□□□ 0.86
SGCE-208ENST00000450385 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
SGCE-208ENST00000450385 C6orf229H3BNL8 230 aa20.43■□□□□ 0.86
SGCE-208ENST00000450385 POTEIP0CG38 1075 aa20.43■□□□□ 0.86
SGCE-208ENST00000450385 POTEJP0CG39 1038 aa20.43■□□□□ 0.86
SGCE-208ENST00000450385 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
SGCE-208ENST00000450385 DPF2Q92785 391 aa20.43■□□□□ 0.86
SGCE-208ENST00000450385 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
SGCE-208ENST00000450385 ZC3H12CQ9C0D7 883 aaKnown RBP20.43■□□□□ 0.86
SGCE-208ENST00000450385 LTBP1Q14766 1721 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 CCER2I3L3R5 266 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 GPSM2P81274 684 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 TBC1D16Q8TBP0 767 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 ZC3H15Q8WU90 426 aaKnown RBP20.42■□□□□ 0.86
SGCE-208ENST00000450385 SEC31BQ9NQW1 1179 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 BSDC1Q9NW68 430 aaPredicted RBP20.42■□□□□ 0.86
SGCE-208ENST00000450385 ANKIB1Q9P2G1 1089 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 POLLQ9UGP5 575 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 GGA1Q9UJY5 639 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 DUOX1Q9NRD9 1551 aa20.42■□□□□ 0.86
SGCE-208ENST00000450385 E9PSI1 815 aa20.41■□□□□ 0.86
SGCE-208ENST00000450385 RPS12P25398 132 aaKnown RBP20.41■□□□□ 0.86
SGCE-208ENST00000450385 CWF19L2Q2TBE0 894 aaKnown RBP20.41■□□□□ 0.86
SGCE-208ENST00000450385 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
SGCE-208ENST00000450385 TMEM88BA6NKF7 163 aa20.4■□□□□ 0.86
SGCE-208ENST00000450385 EPS15P42566 896 aa20.4■□□□□ 0.86
SGCE-208ENST00000450385 XDHP47989 1333 aa20.4■□□□□ 0.86
SGCE-208ENST00000450385 CSF1RP07333 972 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms