RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
AC004540.1-204ENST00000449537 POTEFA5A3E0 1075 aa16.96■□□□□ 0.31
AC004540.1-204ENST00000449537 SULF1Q8IWU6 871 aa16.96■□□□□ 0.31
AC004540.1-204ENST00000449537 YDJCA8MPS7 323 aa16.95■□□□□ 0.3
AC004540.1-204ENST00000449537 ERVV-1B6SEH8 477 aa16.95■□□□□ 0.3
AC004540.1-204ENST00000449537 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
AC004540.1-204ENST00000449537 SP8Q8IXZ3 490 aa16.95■□□□□ 0.3
AC004540.1-204ENST00000449537 NLRP3Q96P20 1036 aa16.95■□□□□ 0.3
AC004540.1-204ENST00000449537 FKTNO75072 461 aa16.94■□□□□ 0.3
AC004540.1-204ENST00000449537 BBOX1O75936 387 aa16.94■□□□□ 0.3
AC004540.1-204ENST00000449537 EGFRP00533 1210 aa16.94■□□□□ 0.3
AC004540.1-204ENST00000449537 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
AC004540.1-204ENST00000449537 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
AC004540.1-204ENST00000449537 SIPA1L3O60292 1781 aaPredicted RBP16.94■□□□□ 0.3
AC004540.1-204ENST00000449537 GPTP24298 496 aa16.93■□□□□ 0.3
AC004540.1-204ENST00000449537 TM4SF4P48230 202 aa16.93■□□□□ 0.3
AC004540.1-204ENST00000449537 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
AC004540.1-204ENST00000449537 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
AC004540.1-204ENST00000449537 CEMIPQ8WUJ3 1361 aa16.92■□□□□ 0.3
AC004540.1-204ENST00000449537 PSMD14O00487 310 aa16.92■□□□□ 0.3
AC004540.1-204ENST00000449537 FKBP1BP68106 108 aa16.92■□□□□ 0.3
AC004540.1-204ENST00000449537 KNSTRNQ9Y448 316 aa16.92■□□□□ 0.3
AC004540.1-204ENST00000449537 RPS12P25398 132 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-204ENST00000449537 MKI67P46013 3256 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-204ENST00000449537 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
AC004540.1-204ENST00000449537 KIAA0100Q14667 2235 aaKnown RBP16.9■□□□□ 0.3
AC004540.1-204ENST00000449537 ABCC4O15439 1325 aa16.9■□□□□ 0.3
AC004540.1-204ENST00000449537 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
AC004540.1-204ENST00000449537 EN2P19622 333 aaPredicted RBP16.89■□□□□ 0.29
AC004540.1-204ENST00000449537 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
AC004540.1-204ENST00000449537 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
AC004540.1-204ENST00000449537 PPP1R42Q7Z4L9 355 aa16.89■□□□□ 0.29
AC004540.1-204ENST00000449537 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
AC004540.1-204ENST00000449537 UBN2Q6ZU65 1347 aa16.89■□□□□ 0.29
AC004540.1-204ENST00000449537 NTSR2O95665 410 aa16.88■□□□□ 0.29
AC004540.1-204ENST00000449537 SLC10A5Q5PT55 438 aa16.88■□□□□ 0.29
AC004540.1-204ENST00000449537 ZNF34Q8IZ26 560 aa16.88■□□□□ 0.29
AC004540.1-204ENST00000449537 TRIM17Q9Y577 477 aa16.88■□□□□ 0.29
AC004540.1-204ENST00000449537 TRIOBPQ9H2D6 2365 aa16.88■□□□□ 0.29
AC004540.1-204ENST00000449537 NUP98P52948 1817 aa16.87■□□□□ 0.29
AC004540.1-204ENST00000449537 UBE2Q2LH0YL09 131 aa16.87■□□□□ 0.29
AC004540.1-204ENST00000449537 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
AC004540.1-204ENST00000449537 CFHR5Q9BXR6 569 aa16.87■□□□□ 0.29
AC004540.1-204ENST00000449537 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
AC004540.1-204ENST00000449537 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
AC004540.1-204ENST00000449537 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
AC004540.1-204ENST00000449537 DBNDD1Q9H9R9 158 aa16.86■□□□□ 0.29
AC004540.1-204ENST00000449537 ASTN2O75129 1339 aaPredicted RBP16.86■□□□□ 0.29
AC004540.1-204ENST00000449537 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
AC004540.1-204ENST00000449537 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
AC004540.1-204ENST00000449537 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
AC004540.1-204ENST00000449537 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
AC004540.1-204ENST00000449537 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
AC004540.1-204ENST00000449537 SCARF1Q14162 830 aa16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 PARP10Q53GL7 1025 aa16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 ANGEL2Q5VTE6 544 aaKnown RBP16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 OTOP1Q7RTM1 612 aa16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 UTP14AQ9BVJ6 771 aaKnown RBP16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 TMEM106CQ9BVX2 250 aa16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
AC004540.1-204ENST00000449537 H0YGN5 161 aa16.83■□□□□ 0.28
AC004540.1-204ENST00000449537 RIMBP2O15034 1052 aa16.83■□□□□ 0.28
AC004540.1-204ENST00000449537 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.28
AC004540.1-204ENST00000449537 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.28
AC004540.1-204ENST00000449537 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
AC004540.1-204ENST00000449537 PAPPA2Q9BXP8 1791 aa16.83■□□□□ 0.28
AC004540.1-204ENST00000449537 ALDH1A1P00352 501 aa16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 GRAPQ13588 217 aa16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 TTLL12Q14166 644 aaPredicted RBP16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 PTPN22Q9Y2R2 807 aa16.82■□□□□ 0.28
AC004540.1-204ENST00000449537 DOK7Q18PE1 504 aa16.81■□□□□ 0.28
AC004540.1-204ENST00000449537 AMER1Q5JTC6 1135 aaPredicted RBP16.81■□□□□ 0.28
AC004540.1-204ENST00000449537 MCM10Q7L590 875 aa16.81■□□□□ 0.28
AC004540.1-204ENST00000449537 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
AC004540.1-204ENST00000449537 NSFL1CQ9UNZ2 370 aaKnown RBP16.81■□□□□ 0.28
AC004540.1-204ENST00000449537 CEP290O15078 2479 aa16.81■□□□□ 0.28
AC004540.1-204ENST00000449537 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
AC004540.1-204ENST00000449537 ECE2O60344 883 aa16.8■□□□□ 0.28
AC004540.1-204ENST00000449537 VIL1P09327 827 aaKnown RBP16.8■□□□□ 0.28
AC004540.1-204ENST00000449537 MYL6BP14649 208 aa16.8■□□□□ 0.28
AC004540.1-204ENST00000449537 RTL9Q8NET4 1388 aa16.79■□□□□ 0.28
AC004540.1-204ENST00000449537 SZT2Q5T011 3432 aa16.79■□□□□ 0.28
AC004540.1-204ENST00000449537 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
AC004540.1-204ENST00000449537 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-204ENST00000449537 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
AC004540.1-204ENST00000449537 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
AC004540.1-204ENST00000449537 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 ZNF280AP59817 542 aaPredicted RBP16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 PRAMEF18Q5VWM3 479 aa16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 EYA3Q99504 573 aa16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 CUL9Q8IWT3 2517 aa16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
AC004540.1-204ENST00000449537 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.28
AC004540.1-204ENST00000449537 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
AC004540.1-204ENST00000449537 NF2P35240 595 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms