RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MPHOSPH8Q99549 860 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 GREM2Q9H772 168 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 CNNM1Q9NRU3 951 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 ECHDC1Q9NTX5 307 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
RFC4-210ENST00000449502 CDC45O75419 566 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
RFC4-210ENST00000449502 SASH1O94885 1247 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
RFC4-210ENST00000449502 TFCP2Q12800 502 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 LDHAL6AQ6ZMR3 332 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 PROM2Q8N271 834 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
RFC4-210ENST00000449502 NLRP3Q96P20 1036 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
RFC4-210ENST00000449502 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 STK32BQ9NY57 414 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
RFC4-210ENST00000449502 ST5P78524 1137 aa11.84□□□□□ -0.51
RFC4-210ENST00000449502 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
RFC4-210ENST00000449502 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
RFC4-210ENST00000449502 NEUROD6Q96NK8 337 aa11.84□□□□□ -0.51
RFC4-210ENST00000449502 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
RFC4-210ENST00000449502 CARMIL3Q8ND23 1372 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
RFC4-210ENST00000449502 NFIXQ14938 502 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 GORABQ5T7V8 394 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 CNBD1Q8NA66 436 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 RREB1Q92766 1687 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
RFC4-210ENST00000449502 SDSP20132 328 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
RFC4-210ENST00000449502 ZNF827Q17R98 1081 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 SLC10A5Q5PT55 438 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 NLGN1Q8N2Q7 840 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
RFC4-210ENST00000449502 EAF2Q96CJ1 260 aaPredicted RBP11.82□□□□□ -0.52
RFC4-210ENST00000449502 C4BP0C0L5 1744 aa11.81□□□□□ -0.52
RFC4-210ENST00000449502 GYS1P13807 737 aa11.81□□□□□ -0.52
RFC4-210ENST00000449502 MFAP1P55081 439 aaKnown RBP11.81□□□□□ -0.52
RFC4-210ENST00000449502 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
RFC4-210ENST00000449502 EZH2Q15910 746 aaKnown RBP11.81□□□□□ -0.52
RFC4-210ENST00000449502 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
RFC4-210ENST00000449502 PUS3Q9BZE2 481 aaKnown RBP11.81□□□□□ -0.52
RFC4-210ENST00000449502 MROH5Q6ZUA9 1318 aa11.81□□□□□ -0.52
RFC4-210ENST00000449502 SALL3Q9BXA9 1300 aa11.81□□□□□ -0.52
RFC4-210ENST00000449502 SERPINB2P05120 415 aa11.8□□□□□ -0.52
RFC4-210ENST00000449502 CCDC158Q5M9N0 1113 aa11.8□□□□□ -0.52
RFC4-210ENST00000449502 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
RFC4-210ENST00000449502 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
RFC4-210ENST00000449502 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
RFC4-210ENST00000449502 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
RFC4-210ENST00000449502 CAMKK2Q96RR4 588 aa11.8□□□□□ -0.52
RFC4-210ENST00000449502 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
RFC4-210ENST00000449502 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 A0A1B0GUL7 405 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 EVI5LQ96CN4 794 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 BOLA2Q9H3K6 86 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 RIPOR2Q9Y4F9 1068 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
RFC4-210ENST00000449502 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
RFC4-210ENST00000449502 LY75O60449 1722 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 HIP1O00291 1037 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 MAP4K4O95819 1239 aaPredicted RBP11.78□□□□□ -0.52
RFC4-210ENST00000449502 SLC5A1P13866 664 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 ATP5JP18859 108 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 TIMM10P62072 90 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
RFC4-210ENST00000449502 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
RFC4-210ENST00000449502 RPGRQ92834 1020 aaKnown RBP11.78□□□□□ -0.52
RFC4-210ENST00000449502 TLR7Q9NYK1 1049 aaKnown RBP11.78□□□□□ -0.52
RFC4-210ENST00000449502 DBNLQ9UJU6 430 aaKnown RBP11.78□□□□□ -0.52
RFC4-210ENST00000449502 REC8O95072 547 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 PDE8BO95263 885 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 IFIT1P09914 478 aaKnown RBP11.77□□□□□ -0.53
RFC4-210ENST00000449502 TM4SF1P30408 202 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 KCNJ4P48050 445 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 PRR5LQ6MZQ0 368 aa11.77□□□□□ -0.53
RFC4-210ENST00000449502 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms